mRNA_Ecto-sp13_S_contig1425.3298.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig1425.3298.1
Unique Name	mRNA_Ecto-sp13_S_contig1425.3298.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: D8LJA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA9_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 1.660e-171
Identity = 271/283 (95.76%), Postives = 273/283 (96.47%), Query Frame = 2

Query:   98 MGLVLVAGCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR 946
            MGLVLVAGCSLIAFGPSIMLW VVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAA AS+AHGSSGR GGALGAEGSG VGE RG RKTGDVP QPE SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCP VPSVIVSALSAQAFVVLDLLLMAAAFAAARSG+AGLMSFSFGLHFAAALTTG NFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR
Sbjct:    1 MGLVLVAGCSLIAFGPSIMLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPASNAHGSSGRYGGALGAEGSGGVGEGRGERKTGDVPDQPEESSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGDAGLMSFSFGLHFAAALTTGFNFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR 283

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: W7TG16_9STRA (Protein binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG16_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.260e-18
Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 2

Query:  536 LRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALT 907
            + LN ++SS+AAG G+GL+HAV++ G+ L S +  PG  F+PSC R P V+V AL A AF ++DL  MA  F   R      M   F +H AA+  T LN +E GCT SLPL+Y VV +A + +T
Sbjct:  103 MPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY-VVMVATVLVT 226

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A7S2UR59_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR59_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-14
Identity = 85/289 (29.41%), Postives = 130/289 (44.98%), Query Frame = 2

Query:  119 GCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAA-QDAWLLSMITGVVLHGFGRLALAKVYVKTEAVI----NEAAAHAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSG--NAGLMSFSFG---------------------LHFAAALTTGLNFIEGGCTASLPLLYGVVALAAI 898
            GC+ +AF P I L  ++  ++  L+I+    AF +L S   +S++W  VP++  D   L +I  V+     R     VY + E  I    +    HAA A+ A                G + ES  +R               L LN VS  +AAG G+G +HA+++ GT L S+    G  + P C  +PS++ SAL A  F +LD++LM   F   R    N  L + +FG                      H +AA +T  N  + GC  +LPLL+G+V + A+
Sbjct:    9 GCAFLAFSPMITLLLLLSYQKAQLIIVVTTSAFAFLLSALCSSLIWLAVPSSLSDNAPLLIIPSVIFQAAFRCGFVAVYHRVEKAILTSIHNHERHAAAANAA------------GNNDGTMNESARLR---------------LELNDVSCGLAAGTGFGGMHAIMLYGTLLASEQRSLGTLYQPGCSFMPSLVNSALMAFLFSLLDIVLMLFTFYGMRRRLQNEELHNLNFGWGTLIGDSKEGGLTAIGITVIAHLSAAFSTVPNRADDGCLVALPLLFGIVVITAV 270

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A484DSN2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSN2_BRELC)

HSP 1 Score: 79.0 bits (193), Expect = 2.060e-13
Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 2

Query:  524 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMG-PGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALA 892
            SS  L LN V+SS+A GVG+ L+HA++M G+ +    G  GAAFS SCP +P V  +ALS  A   LD+ LM  AF   R  +A ++S    +H   AL+   N    GC  S+P+ Y   A+A
Sbjct:  105 SSHQLPLNDVTSSLAGGVGFSLMHALLMFGSLMGSSTGLRGAAFSNSCPAIPLVFSAALSTLALTALDVSLMVLAFDGYRKRSALIVSAVIIIHMGIALSALANMDTNGCYISIPVHYAGAAIA 228

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A0P1A6Q5_PLAHL (Gammasecretase subunit aph n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Q5_PLAHL)

HSP 1 Score: 77.8 bits (190), Expect = 5.310e-13
Identity = 48/124 (38.71%), Postives = 69/124 (55.65%), Query Frame = 2

Query:  524 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALA 892
            SS  L LN ++SS+A GVG+  +HA++M G+ +    G  GAAFS SC  +P +  +ALS  A   LD+ LM  AF   R  +  +++  FG+H   AL+   N    GC  S+P+ Y    LA
Sbjct:  105 SSHQLPLNDITSSLAGGVGFSAMHALLMFGSLVGSSTGSRGAAFSSSCESIPLIFSAALSTLALTALDVALMVVAFDGYRKRSVLIITVVFGIHMGVALSALANMDTNGCYISIPVHYAGAVLA 228

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A7S1ZI65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZI65_TRICV)

HSP 1 Score: 77.8 bits (190), Expect = 1.570e-12
Identity = 94/303 (31.02%), Postives = 127/303 (41.91%), Query Frame = 2

Query:  116 AGCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAA----HAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAAR------------------------SGNAGLMSF-------------SFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAI 898
            AGC+L+AF PS+ L  ++  ++  L+II    AF +L S   AS+LW  VPA+     L +   VV     R    KVY + EAVI ++      H A                      E G       T    G  E +   L LN  S  IAAG G+G +HAV++ GT L S+    G  +  SC  +PS++ SA+ A  F +LD++LM   F   R                        +G   L+ F             +F  H AA   T  N  + GC  SLP L GVV L AI
Sbjct:    8 AGCALLAFSPSLSLLFLIAYQKSQLIIIVTTSAFAFLLSSLLASLLWLPVPASLRTGPLIIPPAVVCQFLLRCGFVKVYHRVEAVIQKSIRKHERHEAEQVRRXXXXXXXXXXXXXHNRAEEGADNVAAPT--SAGLSETAKLRLELNDWSCGIAAGNGFGGMHAVLLYGTLLASESSAVGTLYQDSCSFMPSLVNSAIIAFLFSILDMILMLLTFYGMRRRKDGYARNSVNVRPEGSGGASVCAGRIPLLRFPDTAWGGNLALIVAFFAHLAAGFATVPNLKQNGCLVSLPALAGVVGLTAI 308

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A2D4BUP9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUP9_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 2.530e-12
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 2

Query:  536 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALA 892
            L LN ++SS+A GVG+ L+H+++M G+ ++   G  GAAFS SC  +P ++  ALS  A  V+D+ LM  AF   R  NA L+     +H   AL+   N    GC  S+P+ Y    LA
Sbjct:  109 LPLNDITSSLAGGVGFSLMHSLMMYGSVVASSTGSRGAAFSSSCESIPLILSGALSTLALTVMDVALMVIAFQGYRKMNAMLIGLVALIHLGVALSALANKSTNGCMVSIPIHYAGALLA 228

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A3M6VQE8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQE8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.560e-12
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 2

Query:  536 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALT 907
            L LN ++SS+A GVG+ L+H+++M G+ L    G  GAA+S SC  +P +  +A+S  A  ++D+ LM  AF   R  +  L+   FG+H   AL+   N    GC  S+P+ Y    L  +  T
Sbjct:  109 LPLNDITSSLAGGVGFALMHSLLMFGSLLGSSTGSRGAAYSTSCDNIPLIFSAAISTLALTIIDVGLMIIAFDGYRKRSVLLIGTVFGIHMGVALSALANLDTNGCFISIPVHYAGAVLVCLGAT 233

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: H3GHV0_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3GHV0_PHYRM)

HSP 1 Score: 75.9 bits (185), Expect = 2.560e-12
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 2

Query:  524 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAA 895
            +S  L LN V+SS+A GVG+ ++HA++M G+ +    G  GAAFS SC  +P V  +A+S  A   LD+ LM  AF   R  +A  +   F +H   AL+   N    GC  S+P+ Y   ALA+
Sbjct:  105 ASHQLPLNDVTSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGYRKRSAMAVGAVFVIHMGVALSALANMNTNGCYISIPVHYAGAALAS 229

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BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A8K1C7Q9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Q9_PYTOL)

HSP 1 Score: 74.3 bits (181), Expect = 8.850e-12
Identity = 48/123 (39.02%), Postives = 72/123 (58.54%), Query Frame = 2

Query:  536 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIA 901
            L LN ++SS+A GVG+ ++H+V+M G+ ++   G  GAAFSPSC  +P +   A S  A  ++D+ LM  AF   R+ N  L+     LH   AL+   N    GCT ++P+ Y V AL ++A
Sbjct:  109 LPLNDITSSLAGGVGFSIMHSVMMYGSVVASSTGSRGAAFSPSCESIPLIFSGAFSTLALTIMDVALMIIAFHGYRNRNFVLIGGVGVLHLGVALSALANQNTNGCTIAIPIHY-VGALLSVA 230

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJA9_ECTSI	1.660e-171	95.76	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
W7TG16_9STRA	2.260e-18	46.40	Protein binding protein n=1 Tax=Nannochloropsis ga...	[more]
A0A7S2UR59_9STRA	2.700e-14	29.41	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A484DSN2_BRELC	2.060e-13	41.94	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A0P1A6Q5_PLAHL	5.310e-13	38.71	Gammasecretase subunit aph n=1 Tax=Plasmopara hals...	[more]
A0A7S1ZI65_TRICV	1.570e-12	31.02	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A2D4BUP9_PYTIN	2.530e-12	39.17	Uncharacterized protein n=1 Tax=Pythium insidiosum...	[more]
A0A3M6VQE8_9STRA	2.560e-12	36.00	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]
H3GHV0_PHYRM	2.560e-12	39.20	Uncharacterized protein n=15 Tax=Phytophthora TaxI...	[more]
A0A8K1C7Q9_PYTOL	8.850e-12	39.02	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1425	contig	Ecto-sp13_S_contig1425:10170..13894 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	482.6
Seed ortholog evalue	1.4e-133
Seed eggNOG ortholog	2880.D8LJA9
Model size	966
Hectar predicted targeting category	signal peptide
Exons	6
EggNOG free text desc.	Aph-1 protein
EggNOG OGs	2CYZB@1,2S7DU@2759
Cds size	948
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1425.3298.1	prot_Ecto-sp13_S_contig1425.3298.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig1425 10184..13890 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462761.7251997-UTR-Ecto-sp13_S_contig1425:10169..10183	1681462761.7251997-UTR-Ecto-sp13_S_contig1425:10169..10183	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1425 10170..10183 -
1681462761.7943745-UTR-Ecto-sp13_S_contig1425:13890..13894	1681462761.7943745-UTR-Ecto-sp13_S_contig1425:13890..13894	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig1425 13891..13894 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462761.7370565-CDS-Ecto-sp13_S_contig1425:10183..10315	1681462761.7370565-CDS-Ecto-sp13_S_contig1425:10183..10315	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 10184..10315 -
1681462761.7466574-CDS-Ecto-sp13_S_contig1425:10921..11049	1681462761.7466574-CDS-Ecto-sp13_S_contig1425:10921..11049	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 10922..11049 -
1681462761.7561994-CDS-Ecto-sp13_S_contig1425:11308..11434	1681462761.7561994-CDS-Ecto-sp13_S_contig1425:11308..11434	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 11309..11434 -
1681462761.76595-CDS-Ecto-sp13_S_contig1425:11690..11979	1681462761.76595-CDS-Ecto-sp13_S_contig1425:11690..11979	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 11691..11979 -
1681462761.7756326-CDS-Ecto-sp13_S_contig1425:12411..12478	1681462761.7756326-CDS-Ecto-sp13_S_contig1425:12411..12478	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 12412..12478 -
1681462761.7850761-CDS-Ecto-sp13_S_contig1425:13684..13890	1681462761.7850761-CDS-Ecto-sp13_S_contig1425:13684..13890	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig1425 13685..13890 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig1425:10170..13894-
coding sequence from alignment at Ecto-sp13_S_contig1425:10170..13894-

protein sequence of mRNA_Ecto-sp13_S_contig1425.3298.1

>prot_Ecto-sp13_S_contig1425.3298.1 ID=prot_Ecto-sp13_S_contig1425.3298.1|Name=mRNA_Ecto-sp13_S_contig1425.3298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MSASPLCCSAILGPTSTCLSAVYLSEEQGDIMGLVLVAGCSLIAFGPSIM
LWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMIT
GVVLHGFGRLALAKVYVKTEAVINEAAAHAALASDAHGSSGRCGGALGAE
GSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVI
MVGTALSKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAA
ARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIAL
TRYRPLKSAMIRLRP*

mRNA from alignment at Ecto-sp13_S_contig1425:10170..13894-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig1425.3298.1 ID=mRNA_Ecto-sp13_S_contig1425.3298.1|Name=mRNA_Ecto-sp13_S_contig1425.3298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3725bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:10170..13894- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGTCTGCGTCACCCCTCTGTTGTTCCGCAATTTTGGGACCCACAT
CCACCTGCCTGTCTGCTGTATATCTCTCTGAAGAGCAAGGCGATATCATG
GGGCTTGTGCTCGTGGCAGGCTGCAGCCTGATCGCCTTCGGTCCGTCGAT
TATGCTTTGGGCGGTGGTCGTCGGCAAGCGACCGGCTCTTGTGATCATCG
GCCTCGTCGGGTGAGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGAGACAATCCGCCGTTGC
GGATGTCTTCGTGATGAGTCTCCTTGGCTACGCAGTACGTAGTTCCAAGA
GCACAGCGATCTCTATGTGCAATGTATGTTATATGTCTGCTCATGACATG
AGATATGACGAAAGAAGAAATGTAGCCAAATTACACCTCAAGGCCTGTAG
ACCACTGCAAGAGCTGTAGACTACAGGGTTCGCAGGAGGTGTCTAGCAAA
TGCATGGATTGAGTGAGAACGTGGAGCATGGTATTGGTGAAACAGTTCCA
CGAAGGATTACACGGCATGTCCTTAACTCGCGTGTTATCAAATTTGATAT
CAAAGTTATATACTCCTTAGCTCCAAATGCGGGTGTGTCTGGAGTCGGAA
AAAGCTCGCCAACATATACACCTGTCATACTTTCCCGGGCCGTCTTCGCA
TACTGTTCTAATTTGTGAACCAGAGACAGCAATGGCTTTGTGCTCCTCAC
CCTGAACCTTTTCCCCAACCCAACCCCGTACACCTTACTAAAATCAAGCT
TAAATAATCTCTCGTAAGCTCTACTGGTTTTCCCTCGCCATCGAAGACGC
GCCTACATCAAGCACGGCTTTGGCGGTATGGTGTATCGATTCCGGCTGAC
TAAATAAACGAATCCCGTGGTCTGCAGAAACTCGAACGGCGCGGTTTGTT
TGTGCTACTGCTGTGCTACTATATGCGTATTCACAGCACTACTATTTGGT
CGACAGTGGTAATCCCAAGCCCCATCATCAGTGTAACCGATCACTGGCTT
TATTCTGTGCTGCCAAAGCAGTTACCGCCATCTCGGGACATCCCACGGAC
GACGTGATCATCACCACGAGTAATTTGTCCTTCTCTCTCCCATTATAGTT
CGTGTTCCGGGTCGAACAGCACGCTGATCCCGAACCTCCGCTGAGTTCAA
GAGGTCCGTGGGTCTTGGGTATGTCGGATCTCGCGTCGCAGTGTGAACCA
GGCGTGCTGGTACCGTTTTGACAGAATCGTACGCGTGTCACATCAAACCA
CCGCCGCAAGACCAAGCCACAAACTTGCATGAAAACCTGCTTGCGTACAC
TAACTTCACACTGCTTCTCACCATCCTATATTTTGTCTTTTTCGCATGGG
GTACCAATTAACACAGCGCCTTTTTCTGGCTGGCGTCCATGGCGGCAGCT
TCCGTGCTCTGGACAATCGTTCCCGCTGCGCAGGTGACAGGAGAGAAGCA
GCGTACACAAGGGTTGCGTTCTGCAACAGCTTGTTTTTGTCACGGCAGCC
ACCTAAGTTGTTCCTTAGCAACTTGCTGCCACCGCGGTCGGAAGGCATTA
AAACATGCTGTGATAAATTGGCACATCGACATGTATGACGACCTACTTTC
GTCCAGCCGTCCCTACGGTTGTAAAACACACGGTGTGTTGAAGCGTTGAA
GCACCGTCCATCGTGTTCCAGCAGAGTGCCCGATAGATTCTGCACGGACT
AAAGAATAACTCTGCACGTGCCGGTTGTGCCGCCCAAGAGAGGGACGTTT
ACCTCGTAAGCACGCACGCTGACCGTCGTGCCCGACGTATGCATGCGTGC
CTCTCACTCTCTCCCTGGGCGACTCAACGGCAATCACCCGTGCAATCAAC
CTGCACACCCAAAAGGACGCCTGGTTGCTGTCCATGATCACGGGCGTCGT
CCTGCACGGCTTCGGGCGCCTTGCGCTCGCAAAGGTCTACGTAAAGACGG
AAGCGGTGATCAACGAAGCCGCTGCGCACGCCGCCCTTGCTTCAGATGCT
CACGGAAGCAGCGGCCGGTGCGGCGGCGCTCTGGGGGCAGAGGGCAGCGG
CGAGGTTGGCGAAAGTCGAGGGGTAAGGAAGACGGGCGACGTGCCCGGCC
AGCCGGAAGGATCCTCTGGCTTGCTCAGGCTGAACGGGGTGTCTTCCTCC
ATAGGTGAGATGCAGACGAAGAGACTCGACGCCTCTTCGCCTGGGTTTTC
GAATCGACATGCGTGCTTGCGGCACTCCCTCCTCGAACGGCTGGTTTTCA
TTGCATGGCGTGCTGCCGGCACCCTGCTTTCAAAACTCAAATCGCAGGGG
AAAGAGAGATATGTTTCGTCTCTTTCTTCCACATGGGTGCTATCGCGTAC
CCCAAAGCCGGGATGCCTTGTTCCTCATCCCGTCCGCTTGTCGTTCCTCT
CGTATTTCAGCCGCTGGCGTGGGGTGGGGATTGATTCACGCCGTGATCAT
GGTCGGCACGGCGTTGTCGAAGCACATGGGACCCGGGGCAGCGTTCTCGC
CATCCTGTCCCCGCGTGCCGTCGGTAATCGTTTCTGGTGAGAGCGGCCGC
TGTCCTAGCATGTTTCCCTCACACAAAGATCTGATAGACAGTCTCAAAAT
AGCAAATTGCAATTGTGTCACGAACCTGTTGGGGTCTGTTTAGCACCCCG
AACGTGTGCATGCATACGTACGGGTACGCTGCAGGTGGTCTGGTCAGAGA
CGAAGGTTTATTCGTTGCGGTCCCTTCGCCAGCAAGTGCGATTCCACTCG
GTTCGAACAATGTAGCACGTCCCCCCTTTTCCCAATCATCGCCAGCTTTG
AGCGCGCAGGCGTTTGTGGTTCTAGACCTGCTCCTCATGGCGGCTGCTTT
TGCCGCAGCACGGTCAGGAAATGCGGGGCTCATGAGCTTCTCCTTCGGGC
TACATTTCGCTGCGGCCCTCACGGTATGCGGATTCTTTCGGTAGTCTACG
TGGGTTTTTTAAGGAAGAAAACGTGTTGGATAAAGTATAGAATCGACCAA
GTTAGGGTTGAGGGTCTGGGTGCCCCCTGGGTGGTCTTTCTTCGTGGTGC
ACTTTCTATTTTGCTTGGACTGGACAAGGCTTGCTAGTTCACACTGCTTC
AACGTTAGCTTGAGCGGCCCGAAAACCACAATCCGTTCGCGGACGTACAT
GCTGTTTGGTTGTTGTGAGAGGGGGCTGGAAATTGGATTTCTCCGATGTA
TTTTGGCCCCAAACGTTGCAACATGCCTTGGTTGCTCTGACATGGCGGTT
CACGAACGATACACAGATCTTATTGGCCGTGGTCTTTTGGACAAGTCAAC
TTGTGCATCTGTGAAGGTCTTCCACGTTTCTGCGAGCTGTTGTGGTTGAC
ATGGTTTACCTTGAAGCTTGAAGGTCGTATGAAGTCCTTTGAATACACCA
CACATGATTGTGATGACAAGCAGTCGGTCTACGCGTGGGTTTAATGCCTG
CCCTTCCAAAACCCCGATTCCATACCGTCCCTGTCTCAGAAGCTTCTCCG
TCCGTTTTTGAACGCCCCGATCCTTGCAGACGGGGTTAAACTTCATCGAA
GGCGGGTGCACGGCTTCTCTGCCCTTATTGTACGGGGTGGTCGCGCTGGC
GGCCATCGCTCTCACAAGATATCGCCCGCTCAAATCAGCGATGATACGGC
TGAGGCCATGATCCTCGATTCGAGA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1425:10170..13894-

>mRNA_Ecto-sp13_S_contig1425.3298.1 ID=mRNA_Ecto-sp13_S_contig1425.3298.1|Name=mRNA_Ecto-sp13_S_contig1425.3298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1425:10170..13894- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGCGTCACCCCTCTGTTGTTCCGCAATTTTGGGACCCACATCCAC
CTGCCTGTCTGCTGTATATCTCTCTGAAGAGCAAGGCGATATCATGGGGC
TTGTGCTCGTGGCAGGCTGCAGCCTGATCGCCTTCGGTCCGTCGATTATG
CTTTGGGCGGTGGTCGTCGGCAAGCGACCGGCTCTTGTGATCATCGGCCT
CGTCGGCGCCTTTTTCTGGCTGGCGTCCATGGCGGCAGCTTCCGTGCTCT
GGACAATCGTTCCCGCTGCGCAGGACGCCTGGTTGCTGTCCATGATCACG
GGCGTCGTCCTGCACGGCTTCGGGCGCCTTGCGCTCGCAAAGGTCTACGT
AAAGACGGAAGCGGTGATCAACGAAGCCGCTGCGCACGCCGCCCTTGCTT
CAGATGCTCACGGAAGCAGCGGCCGGTGCGGCGGCGCTCTGGGGGCAGAG
GGCAGCGGCGAGGTTGGCGAAAGTCGAGGGGTAAGGAAGACGGGCGACGT
GCCCGGCCAGCCGGAAGGATCCTCTGGCTTGCTCAGGCTGAACGGGGTGT
CTTCCTCCATAGCCGCTGGCGTGGGGTGGGGATTGATTCACGCCGTGATC
ATGGTCGGCACGGCGTTGTCGAAGCACATGGGACCCGGGGCAGCGTTCTC
GCCATCCTGTCCCCGCGTGCCGTCGGTAATCGTTTCTGCTTTGAGCGCGC
AGGCGTTTGTGGTTCTAGACCTGCTCCTCATGGCGGCTGCTTTTGCCGCA
GCACGGTCAGGAAATGCGGGGCTCATGAGCTTCTCCTTCGGGCTACATTT
CGCTGCGGCCCTCACGACGGGGTTAAACTTCATCGAAGGCGGGTGCACGG
CTTCTCTGCCCTTATTGTACGGGGTGGTCGCGCTGGCGGCCATCGCTCTC
ACAAGATATCGCCCGCTCAAATCAGCGATGATACGGCTGAGGCCATGA