prot_Ecto-sp13_S_contig1425.3298.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1425.3298.1
Unique Nameprot_Ecto-sp13_S_contig1425.3298.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length316
Homology
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: D8LJA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA9_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 1.360e-171
Identity = 271/283 (95.76%), Postives = 273/283 (96.47%), Query Frame = 0
Query:   32 MGLVLVAGCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR 314
            MGLVLVAGCSLIAFGPSIMLW VVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAA AS+AHGSSGR GGALGAEGSG VGE RG RKTGDVP QPE SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCP VPSVIVSALSAQAFVVLDLLLMAAAFAAARSG+AGLMSFSFGLHFAAALTTG NFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR
Sbjct:    1 MGLVLVAGCSLIAFGPSIMLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPASNAHGSSGRYGGALGAEGSGGVGEGRGERKTGDVPDQPEESSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGDAGLMSFSFGLHFAAALTTGFNFIEGGCTASLPLLYGVVALAAIALTRYRPLKSAMIRLR 283          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: W7TG16_9STRA (Protein binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG16_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.080e-18
Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 0
Query:  178 LRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALT 301
            + LN ++SS+AAG G+GL+HAV++ G+ L S +  PG  F+PSC R P V+V AL A AF ++DL  MA  F   R      M   F +H AA+  T LN +E GCT SLPL+Y VV +A + +T
Sbjct:  103 MPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYLRRRKCFRMGVIFLMHSAASGLTILNDVENGCTMSLPLVY-VVMVATVLVT 226          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A7S2UR59_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR59_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.520e-14
Identity = 85/289 (29.41%), Postives = 130/289 (44.98%), Query Frame = 0
Query:   39 GCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAA-QDAWLLSMITGVVLHGFGRLALAKVYVKTEAVI----NEAAAHAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSG--NAGLMSFSFG---------------------LHFAAALTTGLNFIEGGCTASLPLLYGVVALAAI 298
            GC+ +AF P I L  ++  ++  L+I+    AF +L S   +S++W  VP++  D   L +I  V+     R     VY + E  I    +    HAA A+ A                G + ES  +R               L LN VS  +AAG G+G +HA+++ GT L S+    G  + P C  +PS++ SAL A  F +LD++LM   F   R    N  L + +FG                      H +AA +T  N  + GC  +LPLL+G+V + A+
Sbjct:    9 GCAFLAFSPMITLLLLLSYQKAQLIIVVTTSAFAFLLSALCSSLIWLAVPSSLSDNAPLLIIPSVIFQAAFRCGFVAVYHRVEKAILTSIHNHERHAAAANAA------------GNNDGTMNESARLR---------------LELNDVSCGLAAGTGFGGMHAIMLYGTLLASEQRSLGTLYQPGCSFMPSLVNSALMAFLFSLLDIVLMLFTFYGMRRRLQNEELHNLNFGWGTLIGDSKEGGLTAIGITVIAHLSAAFSTVPNRADDGCLVALPLLFGIVVITAV 270          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A484DSN2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSN2_BRELC)

HSP 1 Score: 79.0 bits (193), Expect = 1.930e-13
Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  174 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMG-PGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALA 296
            SS  L LN V+SS+A GVG+ L+HA++M G+ +    G  GAAFS SCP +P V  +ALS  A   LD+ LM  AF   R  +A ++S    +H   AL+   N    GC  S+P+ Y   A+A
Sbjct:  105 SSHQLPLNDVTSSLAGGVGFSLMHALLMFGSLMGSSTGLRGAAFSNSCPAIPLVFSAALSTLALTALDVSLMVLAFDGYRKRSALIVSAVIIIHMGIALSALANMDTNGCYISIPVHYAGAAIA 228          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A0P1A6Q5_PLAHL (Gammasecretase subunit aph n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Q5_PLAHL)

HSP 1 Score: 78.2 bits (191), Expect = 3.640e-13
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 0
Query:  174 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYG--VVALAAIALTRYRPLKSAM 310
            SS  L LN ++SS+A GVG+  +HA++M G+ +    G  GAAFS SC  +P +  +ALS  A   LD+ LM  AF   R  +  +++  FG+H   AL+   N    GC  S+P+ Y   V+A A   +  +R  + A+
Sbjct:  105 SSHQLPLNDITSSLAGGVGFSAMHALLMFGSLVGSSTGSRGAAFSSSCESIPLIFSAALSTLALTALDVALMVVAFDGYRKRSVLIITVVFGIHMGVALSALANMDTNGCYISIPVHYAGAVLACAGAVMILWRSKRLAI 244          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A7S1ZI65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZI65_TRICV)

HSP 1 Score: 77.8 bits (190), Expect = 1.470e-12
Identity = 94/303 (31.02%), Postives = 127/303 (41.91%), Query Frame = 0
Query:   38 AGCSLIAFGPSIMLWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAA----HAALASDAHGSSGRCGGALGAEGSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTAL-SKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAAR------------------------SGNAGLMSF-------------SFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAI 298
            AGC+L+AF PS+ L  ++  ++  L+II    AF +L S   AS+LW  VPA+     L +   VV     R    KVY + EAVI ++      H A                      E G       T    G  E +   L LN  S  IAAG G+G +HAV++ GT L S+    G  +  SC  +PS++ SA+ A  F +LD++LM   F   R                        +G   L+ F             +F  H AA   T  N  + GC  SLP L GVV L AI
Sbjct:    8 AGCALLAFSPSLSLLFLIAYQKSQLIIIVTTSAFAFLLSSLLASLLWLPVPASLRTGPLIIPPAVVCQFLLRCGFVKVYHRVEAVIQKSIRKHERHEAEQVRRXXXXXXXXXXXXXHNRAEEGADNVAAPT--SAGLSETAKLRLELNDWSCGIAAGNGFGGMHAVLLYGTLLASESSAVGTLYQDSCSFMPSLVNSAIIAFLFSILDMILMLLTFYGMRRRKDGYARNSVNVRPEGSGGASVCAGRIPLLRFPDTAWGGNLALIVAFFAHLAAGFATVPNLKQNGCLVSLPALAGVVGLTAI 308          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A2D4BUP9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUP9_PYTIN)

HSP 1 Score: 75.9 bits (185), Expect = 2.380e-12
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  178 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALA 296
            L LN ++SS+A GVG+ L+H+++M G+ ++   G  GAAFS SC  +P ++  ALS  A  V+D+ LM  AF   R  NA L+     +H   AL+   N    GC  S+P+ Y    LA
Sbjct:  109 LPLNDITSSLAGGVGFSLMHSLMMYGSVVASSTGSRGAAFSSSCESIPLILSGALSTLALTVMDVALMVIAFQGYRKMNAMLIGLVALIHLGVALSALANKSTNGCMVSIPIHYAGALLA 228          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A3M6VQE8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQE8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.420e-12
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 0
Query:  178 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIALT 301
            L LN ++SS+A GVG+ L+H+++M G+ L    G  GAA+S SC  +P +  +A+S  A  ++D+ LM  AF   R  +  L+   FG+H   AL+   N    GC  S+P+ Y    L  +  T
Sbjct:  109 LPLNDITSSLAGGVGFALMHSLLMFGSLLGSSTGSRGAAYSTSCDNIPLIFSAAISTLALTIIDVGLMIIAFDGYRKRSVLLIGTVFGIHMGVALSALANLDTNGCFISIPVHYAGAVLVCLGAT 233          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: H3GHV0_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3GHV0_PHYRM)

HSP 1 Score: 75.9 bits (185), Expect = 2.420e-12
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 0
Query:  174 SSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAA 297
            +S  L LN V+SS+A GVG+ ++HA++M G+ +    G  GAAFS SC  +P V  +A+S  A   LD+ LM  AF   R  +A  +   F +H   AL+   N    GC  S+P+ Y   ALA+
Sbjct:  105 ASHQLPLNDVTSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGYRKRSAMAVGAVFVIHMGVALSALANMNTNGCYISIPVHYAGAALAS 229          
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Match: A0A8K1C7Q9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Q9_PYTOL)

HSP 1 Score: 74.3 bits (181), Expect = 8.370e-12
Identity = 48/123 (39.02%), Postives = 72/123 (58.54%), Query Frame = 0
Query:  178 LRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGP-GAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIA 299
            L LN ++SS+A GVG+ ++H+V+M G+ ++   G  GAAFSPSC  +P +   A S  A  ++D+ LM  AF   R+ N  L+     LH   AL+   N    GCT ++P+ Y V AL ++A
Sbjct:  109 LPLNDITSSLAGGVGFSIMHSVMMYGSVVASSTGSRGAAFSPSCESIPLIFSGAFSTLALTIMDVALMIIAFHGYRNRNFVLIGGVGVLHLGVALSALANQNTNGCTIAIPIHY-VGALLSVA 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1425.3298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA9_ECTSI1.360e-17195.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TG16_9STRA2.080e-1846.40Protein binding protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S2UR59_9STRA2.520e-1429.41Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A484DSN2_BRELC1.930e-1341.94Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1A6Q5_PLAHL3.640e-1336.43Gammasecretase subunit aph n=1 Tax=Plasmopara hals... [more]
A0A7S1ZI65_TRICV1.470e-1231.02Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A2D4BUP9_PYTIN2.380e-1239.17Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3M6VQE8_9STRA2.420e-1236.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
H3GHV0_PHYRM2.420e-1239.20Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A8K1C7Q9_PYTOL8.370e-1239.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009294Gamma-secretase subunit Aph-1PFAMPF06105Aph-1coord: 35..298
e-value: 1.6E-40
score: 138.9
IPR009294Gamma-secretase subunit Aph-1PANTHERPTHR12889GAMMA-SECRETASE SUBUNIT APH-1coord: 32..300
NoneNo IPR availablePANTHERPTHR12889:SF0GAMMA-SECRETASE SUBUNIT APH-1coord: 32..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 252..257
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..303
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 258..278
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..315
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableTMHMMTMhelixcoord: 94..113
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 256..278
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
NoneNo IPR availableTMHMMTMhelixcoord: 283..300

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1425contigEcto-sp13_S_contig1425:10184..13890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1425.3298.1mRNA_Ecto-sp13_S_contig1425.3298.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1425 10170..13894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1425.3298.1 ID=prot_Ecto-sp13_S_contig1425.3298.1|Name=mRNA_Ecto-sp13_S_contig1425.3298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MSASPLCCSAILGPTSTCLSAVYLSEEQGDIMGLVLVAGCSLIAFGPSIM
LWAVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMIT
GVVLHGFGRLALAKVYVKTEAVINEAAAHAALASDAHGSSGRCGGALGAE
GSGEVGESRGVRKTGDVPGQPEGSSGLLRLNGVSSSIAAGVGWGLIHAVI
MVGTALSKHMGPGAAFSPSCPRVPSVIVSALSAQAFVVLDLLLMAAAFAA
ARSGNAGLMSFSFGLHFAAALTTGLNFIEGGCTASLPLLYGVVALAAIAL
TRYRPLKSAMIRLRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009294Aph-1