mRNA_Ecto-sp13_S_contig14237.3287.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: D8LIA4_ECTSI (Kinesin-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA4_ECTSI) HSP 1 Score: 304 bits (779), Expect = 3.920e-95 Identity = 178/235 (75.74%), Postives = 185/235 (78.72%), Query Frame = 1
Query: 19 SVSMYDVEDTLSQHFFYDANVIKISSFHHVAQKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQE-----------EAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
+V Y VE T + DA + + S +KRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVH SKRDELERVIQDLQHQ+ L G XXXXX EAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGN+TLKIVELEVQRAQHR
Sbjct: 33 AVVTYVVETT-----YLDAFGVAVDS----EKKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHVSKRDELERVIQDLQHQLIRDDLRASTGXXXXXXXXXXXXXXXXXXXXXXXXXXXEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNITLKIVELEVQRAQHR 258
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A836C6Y4_9STRA (Kinesin-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Y4_9STRA) HSP 1 Score: 235 bits (600), Expect = 3.440e-69 Identity = 123/198 (62.12%), Postives = 158/198 (79.80%), Query Frame = 1
Query: 112 QKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGK-----NXXXXXQEEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
+K+E+K++KL K+LKPS++V K+A +VMKKCKY+H SK+++LE+ IQ+LQH V R IR + EG + + +E+ M LE+Y+ELLYEGKDKDDM +K +GTA IL LC HVGNLE L+QD TLMGALTRVL+EEYKKSV LCYNI+RAFLAFSNF+EMHPIL+ YRVG++T+KI+ELEV+RAQHR
Sbjct: 51 KKKEKKKVKLGKHLKPSSNVPKVAAEVMKKCKYIHESKKEDLEKAIQELQH-VMIRDEIRAKTKAEGDWWRVDEDTSRQQEQEEKPDMSRLEEYIELLYEGKDKDDMIQKTRGTANILALCSHVGNLEALVQDQTLMGALTRVLNEEYKKSVALCYNIMRAFLAFSNFVEMHPILANYRVGSITMKILELEVKRAQHR 247
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A7S1U8D3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8D3_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.360e-47 Identity = 96/187 (51.34%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 145 KNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGE-----EGRGGKNXXXXXQEEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
K LKP+++ +++A DV++KCKY+ ++ +E+++ LQ ++++ + GE E +G XXX EA+M+ +E Y+ELLYEG++ DMT+KI GTA++L LC +VGNLE LIQ++T+MGAL+RVLS+E+KKS++LCYNI+R FLAFSNF EMHPIL+ YRVG LKI+ELE +R HR
Sbjct: 67 KTLKPTSNTARMAEDVVRKCKYIAPQEQPLVEQLLAQLQERIASGGAGAESKGEDWKDEEDKGRVRVRXXXXXEARMEEVETYLELLYEGQE--DMTEKIHGTAMLLKLCYNVGNLEVLIQNNTIMGALSRVLSDEFKKSMDLCYNIVRIFLAFSNFAEMHPILANYRVGVAMLKILELEAKRIGHR 251
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: F0XZK9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK9_AURAN) HSP 1 Score: 166 bits (421), Expect = 6.560e-44 Identity = 91/185 (49.19%), Postives = 132/185 (71.35%), Query Frame = 1
Query: 145 KNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQEE---AQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
K L +D +K+A DV++KCKY+ +SKR +E ++ +LQ V+ K + XXXXX + A MDS+++Y+E+LYEG + DM +K++GT IL LC VGNLEHL+Q HTLMGAL+RVL+E+Y++S +L YNI+R FL+FSNF+EMH IL+ YRVG++ +++VE EV+R +HR
Sbjct: 50 KTLNERSDPAKIADDVLRKCKYIPSSKRRVVEMLVANLQEHVAGDPDAAKNAAAQRXXXXXXXXXXXRDDVVADMDSVDEYIEMLYEGNE--DMKEKVRGTEKILKLCSFVGNLEHLVQHHTLMGALSRVLAEDYRRSSDLAYNIVRVFLSFSNFVEMHAILAQYRVGSICVELVEFEVKRTEHR 232
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A8J2SG69_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SG69_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.770e-42 Identity = 85/181 (46.96%), Postives = 118/181 (65.19%), Query Frame = 1
Query: 145 KNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQEEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQH 687
K L +D K+A DVM+KCKY+ +SKR +E ++ +LQ ++ R+ + + E A +D ++DYVELLYEG D+ KIKGT+L+L LC VG+LEHL+Q TLMGAL RVL E+ KKS E+ YN+LR FL+FSNF+EMH +L+ +RVG+V L++V E R H
Sbjct: 56 KTLDERSDPEKIADDVMRKCKYIPSSKRRVVEMLVANLQDHLARNDDARQNAQDARERRRRKETNTSERASIDDVDDYVELLYEG----DIDTKIKGTSLVLSLCGRVGDLEHLVQHQTLMGALARVLQEDGKKSTEVAYNVLRVFLSFSNFVEMHQLLAQHRVGSVCLEVVAFETDRITH 232
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A7S2SW89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW89_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.330e-33 Identity = 75/180 (41.67%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 157 PSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQE--EAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
P+ DV +A V+ KCK + +SK +E + +LQ ++ + +GG G G + EA M+ L+DY+E++Y+ + D + KI+GT L++ LC +VGNLE LIQ+H+LM LTR+L E+KKS+E+ YNI+R FL+FS F MH +L+ Y+VG++TLK++ E RA+ R
Sbjct: 53 PAADVEAVADQVVDKCKQIPSSKVGAVEAALIELQRRLLRERAM--DGGGRGYGAASDRELSAALPEANMNDLDDYMEMMYDTDE--DYSNKIRGTGLVVKLCKNVGNLELLIQNHSLMALLTRLLDTEHKKSLEMVYNIIRIFLSFSTFEVMHDLLTQYKVGSLTLKVLTYETDRAEQR 228
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A7S2HNH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNH1_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.730e-33 Identity = 76/210 (36.19%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 64 FYDANVIKISSFHHVAQKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQE-EAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQRAQHR 690
FYD V V + R R++L K L S+D+ +A ++ CKY+ AS++ +E+ + LQ + + + E + +GG + EA +D L++Y+E++YE DMT+K++GTA+IL LC +VGNLE ++ + +M L R+ +E++KS+E+CYNI+R +L+ SNF+EMHP+L+++ +G ++L I++ E R QH+
Sbjct: 26 FYDKEVTYDDD--RVDRTRHSTRVRL-KALDISSDIPSMAASIVNNCKYLTASRQKYVEQALVKLQRRNLQQAQLSDEREKYDQGGMGEAPGGMDGEASVDKLDEYLEMMYETGP--DMTEKVRGTAMILQLCFNVGNLEVIVGNQAIMSLLGRLFKDEFRKSMEMCYNIMRIYLSLSNFLEMHPVLASHNIGRLSLIIMDYENTRIQHQ 230
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A3Q1HBD2_ANATE (Kinesin-associated protein 3-like n=2 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HBD2_ANATE) HSP 1 Score: 130 bits (326), Expect = 5.510e-31 Identity = 78/224 (34.82%), Postives = 137/224 (61.16%), Query Frame = 1
Query: 7 LTALSVSMYDVEDTLSQHFFYDANVIKISSFHHVAQKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQEEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQR 678
+TA S+ ++ E L H+ +A+++ S H V +++E ++I K+L PSTDV+ LA V+++CK + S+ ++E+++ LQ++ S+ + + E + EEA + +++YVELLYEG + +KI+G+ALIL L + NLE L+ + +GAL RVL E++K+SVEL I+ F FS+F + H ++S Y++G + + +VE E++R
Sbjct: 4 VTAGSLDVHPTEKALVVHYEVEASILGESGGHMVGERKEGQKIVRVKSLSPSTDVAALAKKVVEECKLIPPSRLPQVEQLLYYLQNRKSSPVVGKGESSKPRELTPFEGFELNEEASITRVDEYVELLYEG-----IPEKIRGSALILQLARNPDNLEELLHNEAALGALARVLREDWKQSVELATIIIYIFFCFSSFSQFHGVVSHYKIGALCMSVVEHELKR 222
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A482RY74_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RY74_9ARCH) HSP 1 Score: 126 bits (317), Expect = 6.750e-31 Identity = 81/216 (37.50%), Postives = 128/216 (59.26%), Query Frame = 1
Query: 112 QKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQ------------------HQVSTRTLIRKEGGEEGRGGKNXXXXXQEE---AQMDSLEDYVELLYE--GKDKDDMTKKI----KGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQR 678
+K E +RIK+ K+L ++++LA D++ KCKY+H S+ +E+E ++ L+ HQ + +G ++ + A M+ L+DY+ELLY+ GK + + + + KGT LIL LC V NLE LIQ+ T+MGA+TRV EEYK+S++L +NILR FLAFSNF+EMH +++ Y++G +T++ V+ E R
Sbjct: 15 RKPEVRRIKI-KSLSADKNMAQLANDIIDKCKYIHPSRAEEIETLLIHLRRTKLAQSDSGTTPSNHCMHQPQHNSGSSYQGAAAPSSDRHREKDKESRLPSASMNQLDDYLELLYQVSGKTEKEREEGLRMQEKGTLLILRLCRDVMNLEQLIQNGTVMGAVTRVFQEEYKRSLDLSFNILRIFLAFSNFVEMHALMAQYKIGVLTMRWVDFEALR 229
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Match: A0A4U5UYW6_COLLU (Kinesin-associated protein 3 n=1 Tax=Collichthys lucidus TaxID=240159 RepID=A0A4U5UYW6_COLLU) HSP 1 Score: 123 bits (308), Expect = 9.200e-31 Identity = 78/231 (33.77%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 1 RFLTALSVSMYDVEDTLSQHFFYDANVIKISSFHHVAQKRERKRIKLRKNLKPSTDVSKLAGDVMKKCKYVHASKRDELERVIQDLQHQVSTRTLIRKEGGEEGRGGKNXXXXXQ-----EEAQMDSLEDYVELLYEGKDKDDMTKKIKGTALILDLCCHVGNLEHLIQDHTLMGALTRVLSEEYKKSVELCYNILRAFLAFSNFMEMHPILSTYRVGNVTLKIVELEVQR 678
R +TA S+ ++ E L H+ +A ++ H + +++E ++I K+L PSTDV LA VM++CK + AS+ ++E+++ LQ++ S+ + E E+ + EEA + +++Y+ELLYEG + +KI+G+ALIL L + NLE L+ + ++GAL RVL E++K+SV+L I+ F FS+F + H ++S Y++G + + +VE E++R
Sbjct: 10 RKVTAGSLDVHPTEKALVVHYEVEATILGEGGGHMLGERKEGQKIIRVKSLSPSTDVGALAKKVMEECKLIPASRLPQVEQLLYYLQNRKSSPVEGKLEKKEKRSVKPRELTPFEGMEINEEACITRVDEYIELLYEG-----IPEKIRGSALILQLARNPDNLEELLHNEAVLGALARVLREDWKQSVDLATIIIYIFFCFSSFSQFHGVVSHYKIGALCMSVVEHELKR 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14237.3287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14237.3287.1 >prot_Ecto-sp13_S_contig14237.3287.1 ID=prot_Ecto-sp13_S_contig14237.3287.1|Name=mRNA_Ecto-sp13_S_contig14237.3287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp MYDVEDTLSQHFFYDANVIKISSFHHVAQKRERKRIKLRKNLKPSTDVSKback to top mRNA from alignment at Ecto-sp13_S_contig14237:1925..4114- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14237.3287.1 ID=mRNA_Ecto-sp13_S_contig14237.3287.1|Name=mRNA_Ecto-sp13_S_contig14237.3287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14237:1925..4114- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14237:1925..4114- >mRNA_Ecto-sp13_S_contig14237.3287.1 ID=mRNA_Ecto-sp13_S_contig14237.3287.1|Name=mRNA_Ecto-sp13_S_contig14237.3287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14237:1925..4114- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |