mRNA_Ecto-sp13_S_contig14215.3274.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A6H5JV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV72_9PHAE) HSP 1 Score: 150 bits (379), Expect = 4.100e-44 Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
KVYEKDA+SLTWRPPPNTDGTPNESVDDVFVRVRQ LLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH
Sbjct: 109 KVYEKDAVSLTWRPPPNTDGTPNESVDDVFVRVRQ-LLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 182
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: UPI000D1C4CAB (uncharacterized protein LOC9662274 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C4CAB) HSP 1 Score: 97.8 bits (242), Expect = 6.100e-23 Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+VYE D +SL RPPPNT+GTPNESV DVFVRV Q L+S LETQY G+ ++IV+PDSD LSVLQ+ + G D+ +H
Sbjct: 196 EVYETDVVSLQSRPPPNTNGTPNESVADVFVRVTQ-LMSILETQYAGDSIVIVSPDSDNLSVLQAGLYGLDLRRH 269
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: R7QBG4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBG4_CHOCR) HSP 1 Score: 97.4 bits (241), Expect = 1.150e-22 Identity = 44/74 (59.46%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 4 VYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+ E D + +WRP P DGTPN+S DDVFVRVRQ LLSKLETQY GE+++I++PDSD LSVLQ+ ++G+++ +H
Sbjct: 195 IIENDGLDSSWRPVPGEDGTPNDSSDDVFVRVRQ-LLSKLETQYFGENIVILSPDSDPLSVLQTVLMGQELTEH 267
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: D8T004_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T004_SELML) HSP 1 Score: 94.7 bits (234), Expect = 1.230e-22 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDM 216
+VYE D +SL RPPPNT+GTPNESV DVFVRV Q L+S LETQY G+ ++IV+PDSD LSVLQ+ + G D+
Sbjct: 124 EVYETDVVSLQSRPPPNTNGTPNESVADVFVRVTQ-LMSILETQYAGDSIVIVSPDSDNLSVLQAGLYGLDL 194
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A2P5CJB6_PARAD (Histidine phosphatase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5CJB6_PARAD) HSP 1 Score: 97.1 bits (240), Expect = 1.420e-22 Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+VYE D+IS+T +PPP DGTPNESV DVFVRV Q L+S LETQY G+ VIIV+PDSD L++LQ+ ++G D+ +H
Sbjct: 200 EVYESDSISITTKPPPINDGTPNESVKDVFVRVTQ-LMSILETQYSGDTVIIVSPDSDNLTILQAGLIGLDLRRH 273
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A7S4LBC9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LBC9_9EUGL) HSP 1 Score: 94.4 bits (233), Expect = 1.660e-22 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDM 216
+VY D I + RPPP TDGTPNESV+DVFVRV QLLSKLETQYQG VIIV+PDSD L+VLQ+ + G DM
Sbjct: 92 EVYAADQIDTSIRPPPFTDGTPNESVNDVFVRV-VQLLSKLETQYQGVTVIIVSPDSDNLTVLQAAMTGLDM 162
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: UPI0011DFE855 (uncharacterized protein LOC115708766 n=1 Tax=Cannabis sativa TaxID=3483 RepID=UPI0011DFE855) HSP 1 Score: 95.5 bits (236), Expect = 4.900e-22 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+VYE D IS T +PPP DGTPNESV DVFVRV Q L+S LETQY GE VIIV+PDSD L++LQ+ ++G D+ +H
Sbjct: 193 EVYESDGISPTIKPPPINDGTPNESVKDVFVRVTQ-LMSILETQYSGETVIIVSPDSDNLTILQAGLIGLDLRRH 266
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A5K0WAR2_9MAGN (Uncharacterized protein (Fragment) n=5 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WAR2_9MAGN) HSP 1 Score: 89.4 bits (220), Expect = 6.160e-22 Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 4 VYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDM 216
VY+ D IS + +PPP DGTPNESV+DVFVRV Q L+S LETQY G+ ++IV+PDSD LSVLQ+ ++G D+
Sbjct: 1 VYDSDRISPSTKPPPIDDGTPNESVEDVFVRVTQ-LMSILETQYAGDSIVIVSPDSDNLSVLQAGLVGLDL 70
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A2N9H0P2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H0P2_FAGSY) HSP 1 Score: 90.5 bits (223), Expect = 6.990e-22 Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+VY D+IS T +PPP DGTPNESV DVFVRV Q L+S LETQY G+ VIIV+PDSD L++LQ+ ++G ++ +H
Sbjct: 3 QVYASDSISTTIKPPPIDDGTPNESVADVFVRVTQ-LMSILETQYSGDTVIIVSPDSDNLTILQAGLVGLELRRH 76
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Match: A0A1Y1ILS9_KLENI (Histidine phosphatase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ILS9_KLENI) HSP 1 Score: 94.4 bits (233), Expect = 9.710e-22 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 1 KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKH 225
+VYE D S +RPP DGTPNESV+DV VRVRQ L+S LETQYQG+ V+IV+PDSD LSVLQ+ +LG D+ +H
Sbjct: 168 EVYESDRESAFYRPPAFVDGTPNESVNDVLVRVRQ-LMSILETQYQGDQVVIVSPDSDNLSVLQAALLGLDLRQH 241 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14215.3274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14215.3274.1 >prot_Ecto-sp13_S_contig14215.3274.1 ID=prot_Ecto-sp13_S_contig14215.3274.1|Name=mRNA_Ecto-sp13_S_contig14215.3274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp KVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQQLLSKLETQYQGEDVback to top mRNA from alignment at Ecto-sp13_S_contig14215:360..1046+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14215.3274.1 ID=mRNA_Ecto-sp13_S_contig14215.3274.1|Name=mRNA_Ecto-sp13_S_contig14215.3274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=687bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14215:360..1046+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14215:360..1046+ >mRNA_Ecto-sp13_S_contig14215.3274.1 ID=mRNA_Ecto-sp13_S_contig14215.3274.1|Name=mRNA_Ecto-sp13_S_contig14215.3274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14215:360..1046+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |