prot_Ecto-sp13_S_contig14080.3190.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig14080.3190.1
Unique Nameprot_Ecto-sp13_S_contig14080.3190.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length269
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14080.3190.1 vs. uniprot
Match: A0A6H5KPT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT4_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 2.630e-159
Identity = 235/273 (86.08%), Postives = 241/273 (88.28%), Query Frame = 0 
Query:    1 MNEFLRVGHSITSVDRKFTAVLESDCNLVVYHLRGGGKKVRVWETSSFSPEGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNQAHVGWFRQNSFHAAVLPSGNLVVSQGDSPMHPAARRCVWGAFGCPGDGGVMEWKLVWMSFRTKAGDMWCKVKGCDGAGENSYDSDNGENSGGNETRDSSAWKWQSGGXXXAGVDGGAFDPRAAGRGGGRKDDGVGGG-----MSHLLTQPGAAIKKAAGQGVAWLTEALAKIKSAAEDSAYAASRPRHW 268
            MNEFLRVGHSI SVDRKFTAVLESDCNLVVYHLRGGGKKV  WETSSFS EGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNN AHVGWFRQNSFHAAVLPSGNLVVSQGDSPMHP ARRCVWGAFGCPGDGGVMEWKLVWMS R KAGD+WCKVKGCDGA E SY SD+G N GGN TRDSS+WKWQSGG   AGVDGGAFDP AAGR  GR+D           +SHLLTQPG AIKKAAG+GVAWLTEALAKIKSAAEDSAYAASRPRHW
Sbjct:  299 MNEFLRVGHSIASVDRKFTAVLESDCNLVVYHLRGGGKKV--WETSSFSSEGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNHAHVGWFRQNSFHAAVLPSGNLVVSQGDSPMHPGARRCVWGAFGCPGDGGVMEWKLVWMSVRNKAGDIWCKVKGCDGAEEYSYYSDSGGNPGGNGTRDSSSWKWQSGGGDGAGVDGGAFDPWAAGRSDGREDXXXXXXXXXXXISHLLTQPGTAIKKAAGRGVAWLTEALAKIKSAAEDSAYAASRPRHW 569
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BLAST of mRNA_Ecto-sp13_S_contig14080.3190.1 vs. uniprot
Match: D7FV20_ECTSI (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV20_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 2.250e-142
Identity = 228/316 (72.15%), Postives = 235/316 (74.37%), Query Frame = 0 
Query:    1 MNEFLRVGHSITSVDRKFTAVLESDCNLVVYHLRGGGKKVR----------------------------------------VWETSSFSPEGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNQAHVGWFRQNSFHAAVLPSGNLVVSQGDSPMHPAARRCVWGAFGCPGDGGVMEWKLVWMSFRTKAGDMWCKVKGCDG--AGENSYDSDNGENSGGNETRDSSAWKWQSGGXXXAGVDGGAFDPRAAGRGGGRKDDGVGGG------MSHLLTQPGAAIKKAAGQGVAWLTEALAKIKSAAEDSAYAASRPRHW 268
            MNEFLRVGHSI SVDRKFTAVLESDCNLVVYHLRGGGKKV+                                        VWETSSFS EGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNQAHVGWFRQNSFHAAVLPSGNLVVSQGDSPMH AARRCVWGAFGCPGDGGVMEWKLVWMSFRTKAGD+WCKVKGCDG  AGE SY SD+G+N GGN TRDSS+WK Q   XXX      AFDP A                     +SHLLTQPGAAIKKAAG+GVAWLTEALAKIKSAAEDSAYAASRPRHW
Sbjct:   71 MNEFLRVGHSIASVDRKFTAVLESDCNLVVYHLRGGGKKVKSLWRWGGGACSYVLHALAVRPLTTRLREDGALFPQDRSPMVWETSSFSSEGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNQAHVGWFRQNSFHAAVLPSGNLVVSQGDSPMHSAARRCVWGAFGCPGDGGVMEWKLVWMSFRTKAGDIWCKVKGCDGDGAGEYSYYSDSGDNPGGNGTRDSSSWKRQXXXXXXXXXXXXAFDPWAXXXXXXXXXXXXXXXXXXXXXISHLLTQPGAAIKKAAGRGVAWLTEALAKIKSAAEDSAYAASRPRHW 386
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14080.3190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPT4_9PHAE2.630e-15986.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV20_ECTSI2.250e-14272.15Bulb-type lectin domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001480Bulb-type lectin domainSMARTSM00108blect_4coord: 2..116
e-value: 0.0078
score: 11.4
IPR001480Bulb-type lectin domainPROSITEPS50927BULB_LECTINcoord: 1..120
score: 12.53
IPR036426Bulb-type lectin domain superfamilyGENE3D2.90.10.10coord: 1..125
e-value: 2.8E-15
score: 58.3
IPR036426Bulb-type lectin domain superfamilySUPERFAMILY51110alpha-D-mannose-specific plant lectinscoord: 6..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14080contigEcto-sp13_S_contig14080:640..3421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14080.3190.1mRNA_Ecto-sp13_S_contig14080.3190.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig14080 640..3436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig14080.3190.1 ID=prot_Ecto-sp13_S_contig14080.3190.1|Name=mRNA_Ecto-sp13_S_contig14080.3190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp
MNEFLRVGHSITSVDRKFTAVLESDCNLVVYHLRGGGKKVRVWETSSFSP
EGRCFVAIQDNGMLVVMAGNDPSAPGNVLWSNNQAHVGWFRQNSFHAAVL
PSGNLVVSQGDSPMHPAARRCVWGAFGCPGDGGVMEWKLVWMSFRTKAGD
MWCKVKGCDGAGENSYDSDNGENSGGNETRDSSAWKWQSGGGGGAGVDGG
AFDPRAAGRGGGRKDDGVGGGMSHLLTQPGAAIKKAAGQGVAWLTEALAK
IKSAAEDSAYAASRPRHW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001480Bulb-type_lectin_dom
IPR036426Bulb-type_lectin_dom_sf