prot_Ecto-sp13_S_contig14078.3185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig14078.3185.1
Unique Name	prot_Ecto-sp13_S_contig14078.3185.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	99

Homology

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 159 bits (402), Expect = 2.760e-43
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE+G  ++STFSSGALF FFVPY  M  +TYGIAVPSGLFVPSLLSGAAFGRL GHLLHKLD  +GTFADSGTYALIGAAA LGGMARMTISLTV
Sbjct:  513 LFHFREAGASDMSTFSSGALFFFFVPYIAMATITYGIAVPSGLFVPSLLSGAAFGRLVGHLLHKLDHTNGTFADSGTYALIGAAAVLGGMARMTISLTV 611

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S2CPI8_9STRA (Chloride channel protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPI8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.430e-40
Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE G  +  TFS+GALF+F+  YT M C+TYG+AVPSGLFVPSLLSGAA GR CGH+LHKLD +SGTFADSGTYAL+GAAA LGGMARMTISL V
Sbjct:  160 LFHFREIGENDQHTFSAGALFLFWSLYTAMACITYGLAVPSGLFVPSLLSGAAMGRFCGHVLHKLDGSSGTFADSGTYALVGAAAGLGGMARMTISLAV 258

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S2UST4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UST4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.180e-39
Identity = 74/99 (74.75%), Postives = 80/99 (80.81%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE G  ++ TFSSGALFVFF+PY  + C TYG+ VPSGLFVP LLSGAAFGRL GHLLHKLD+ASGTFADSG       AA LGGMARMTISLTV
Sbjct:  143 LFHFREGGEADVQTFSSGALFVFFLPYICLACWTYGLGVPSGLFVPCLLSGAAFGRLFGHLLHKLDNASGTFADSGXXXXXXXAAVLGGMARMTISLTV 241

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S3NPJ8_9STRA (Chloride channel protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPJ8_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.310e-39
Identity = 78/101 (77.23%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 LFHFRESGR--REISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE G    ++ TFSS A+F F++PYT++ CLTYGIAVPSGLFVPSLLSGAA GRL GHLLH+LD  SGTFADSGTYAL+GAAA LGGMARMTISLTV
Sbjct:  512 LFHFREVGNFDDDVETFSSVAVFAFYIPYTMLACLTYGIAVPSGLFVPSLLSGAAMGRLVGHLLHRLDAQSGTFADSGTYALVGAAAGLGGMARMTISLTV 612

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S2WR56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WR56_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.520e-39
Identity = 72/99 (72.73%), Postives = 80/99 (80.81%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHF+E G     TFSS AL +FF+PY  M    YGIA+PSGLFVPSLLSGAAFGRL GHLL K+ + +GTFADSGTYAL+GAAA LGGMARMTISLTV
Sbjct:   83 LFHFQEDGSNNSRTFSSAALVIFFLPYITMATFVYGIAIPSGLFVPSLLSGAAFGRLFGHLLQKISNNNGTFADSGTYALMGAAAVLGGMARMTISLTV 181

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.900e-39
Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 LFHFRESG-RREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE G  +EI TF S ALF+FF+PY  + C TYG+ VPSGLFVP LLSGA+FGRL GHLLHKLD+A+GTFADSGTYAL+GAAA LGGMARMTISLTV
Sbjct:  274 LFHFREGGGTKEIMTFGSSALFMFFLPYLALSCWTYGLNVPSGLFVPCLLSGASFGRLFGHLLHKLDNANGTFADSGTYALMGAAAVLGGMARMTISLTV 373

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7R9U7Y3_9STRA (Chloride channel protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Y3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.430e-39
Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRESG  E +TFSSGAL +FF PY IMGC+TYG+AVPSGLFVPSLLSGAAFGRL GHL+H+LDD+SGTFADSG       AA LGGMARMTISLTV
Sbjct:  497 LFHFRESGDDENNTFSSGALLLFFFPYIIMGCVTYGLAVPSGLFVPSLLSGAAFGRLIGHLMHRLDDSSGTFADSGXXXXXXXAAVLGGMARMTISLTV 595

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: F0Y0N4_AURAN (Chloride channel protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0N4_AURAN)

HSP 1 Score: 145 bits (367), Expect = 1.350e-38
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 LFHFRESG--RREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRESG   +++ TFSS A+  F+VPY ++ CLTYGIAVPSGLFVPSLLSGAA GRL GHLLH+LD  SGTFAD+GTYAL+GAAA LGGMARMTISLTV
Sbjct:  402 LFHFRESGVFNQDVETFSSLAVATFYVPYFLLACLTYGIAVPSGLFVPSLLSGAALGRLVGHLLHRLDAQSGTFADAGTYALVGAAAGLGGMARMTISLTV 502

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S2B9U1_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B9U1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.780e-38
Identity = 75/99 (75.76%), Postives = 81/99 (81.82%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFH  + G    STFSSGALF+FF+PYTIM C+ YG+AVPSGLFVPSLLSGAAFGRL GHLLHKLD  SGTFADS     IGAA+ LGGMARMTISLTV
Sbjct:   53 LFHSPDRGINGASTFSSGALFLFFLPYTIMACINYGVAVPSGLFVPSLLSGAAFGRLFGHLLHKLDGESGTFADSXXXXXIGAASVLGGMARMTISLTV 151

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BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 140 bits (353), Expect = 1.320e-37
Identity = 74/99 (74.75%), Postives = 79/99 (79.80%), Query Frame = 0

Query:    1 LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV 99
            LFHFRE+G  + STFSS ALF+FFVPY  +  +TYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLD  SGTFADSG          LGGMARMTISLTV
Sbjct:   86 LFHFREAGADDSSTFSSAALFLFFVPYIALASITYGIAVPSGLFVPSLLSGAAFGRLCGHLLHKLDHTSGTFADSGXXXXXXXXXXLGGMARMTISLTV 184

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig14078.3185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1Z5JAK4_FISSO	2.760e-43	83.84	Chloride channel protein n=2 Tax=Fistulifera solar...	[more]
A0A7S2CPI8_9STRA	1.430e-40	76.77	Chloride channel protein n=2 Tax=Dictyocha speculu...	[more]
A0A7S2UST4_9STRA	1.180e-39	74.75	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S3NPJ8_9STRA	1.310e-39	77.23	Chloride channel protein n=1 Tax=Aureoumbra lagune...	[more]
A0A7S2WR56_9STRA	1.520e-39	72.73	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A7S2XUS9_9STRA	1.900e-39	77.00	Chloride channel protein n=1 Tax=Fibrocapsa japoni...	[more]
A0A7R9U7Y3_9STRA	2.430e-39	77.78	Chloride channel protein n=1 Tax=Pinguiococcus pyr...	[more]
F0Y0N4_AURAN	1.350e-38	76.24	Chloride channel protein n=1 Tax=Aureococcus anoph...	[more]
A0A7S2B9U1_9STRA	1.780e-38	75.76	Chloride channel protein n=1 Tax=Dictyocha speculu...	[more]
A0A7S1D5H2_CYCTE	1.320e-37	74.75	Chloride channel protein n=1 Tax=Cyclophora tenuis...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001807	Chloride channel, voltage gated	PRINTS	PR00762	CLCHANNEL	coord: 39..59 score: 59.9 coord: 76..92 score: 58.59 coord: 94..99 score: 17.3
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 14..99 e-value: 1.7E-21 score: 76.9
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 2..99 e-value: 3.7E-22 score: 80.8
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 15..99
None	No IPR available	PANTHER	PTHR11689:SF92	H(+)/CL(-) EXCHANGE TRANSPORTER 7	coord: 10..99
None	No IPR available	PANTHER	PTHR11689	CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER	coord: 10..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..95
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..63
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 38..42
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 96..99
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 64..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..37
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 20..39

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig14078	contig	Ecto-sp13_S_contig14078:222..1313 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig14078.3185.1	mRNA_Ecto-sp13_S_contig14078.3185.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig14078 222..1313 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig14078.3185.1 ID=prot_Ecto-sp13_S_contig14078.3185.1|Name=mRNA_Ecto-sp13_S_contig14078.3185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
LFHFRESGRREISTFSSGALFVFFVPYTIMGCLTYGIAVPSGLFVPSLLS
GAAFGRLCGHLLHKLDDASGTFADSGTYALIGAAACLGGMARMTISLTV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001807	Cl-channel_volt-gated
IPR014743	Cl-channel_core