mRNA_Ecto-sp13_S_contig14070.3180.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 167 bits (422), Expect = 2.980e-46 Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1
Query: 19 GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPV+ ESLRYGSS+GGKTVHNEDESLAKKLKAAAKKLNLRTHRVND
Sbjct: 345 GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 430
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: A0A6H5KFE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE7_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.370e-45 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 1
Query: 19 GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPV+ ESLRYGS DGGKTVHN+DESLAKKLKAAAKKLNL THRVND
Sbjct: 30 GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSDDGGKTVHNDDESLAKKLKAAAKKLNLCTHRVND 115
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 153 bits (387), Expect = 5.270e-45 Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 19 GAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
GAGHDLRGATHYL RIRGLRYALQCLIDYKGFRMTAQAVLPVSSE+LRYGSSD G+TVHN+ E+LAKKLKA AKKLNLRTH VND
Sbjct: 109 GAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTHWVND 194
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: Q54JI4_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54JI4_DICDI) HSP 1 Score: 91.7 bits (226), Expect = 1.380e-19 Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
A ++L+G Y + GL Y L LIDYKGFR+ A +VLP+SS++++YGSSD G TVHN L +K+K A +KLNL++HRV
Sbjct: 420 ASNELKGLVSYYMAGVPGLNYPLMALIDYKGFRLIALSVLPISSDTIKYGSSDSGSTVHNSIPDLNEKMKEAGRKLNLKSHRVGS 504
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: A0A7S4I6Y8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I6Y8_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 3.820e-19 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRV 270
AGHDL+G Y I GL + L L+DY G+R+ A +VLP++ ++L YGS+D G T+HN + +LA+K+K A + LNL+TH V
Sbjct: 31 AGHDLKGLISYFNLGIAGLHFPLMALVDYLGYRLIAISVLPITKDTLVYGSADAGVTLHNSNPTLARKMKLAGEMLNLKTHTV 113
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: A0A8J4PLZ3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PLZ3_9MYCE) HSP 1 Score: 89.7 bits (221), Expect = 6.520e-19 Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
A ++L+G Y T ++GL Y L LIDYKGFR+ A +VLP+SS++++YGSSD G VH+E L K+K +KLNL+ HRV
Sbjct: 321 ASNELKGLISYYMTDVKGLNYPLMALIDYKGFRLIALSVLPISSDTIKYGSSDSGSVVHSEIPELNDKMKQVGEKLNLKAHRVGS 405
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: A0A151ZSI6_9MYCE (Leucine-rich repeat-containing protein (LRR) n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSI6_9MYCE) HSP 1 Score: 87.4 bits (215), Expect = 4.220e-18 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
A ++L+G T Y + GL Y + LIDYKGFR+ A +VLP+SSE++RYGSSD G VH + + L K+ +KLNL+ HRV
Sbjct: 288 ASNELKGLTSYYTAGVEGLNYPMMALIDYKGFRLIALSVLPISSETIRYGSSDSGTVVHYDIDELNNKMLETGRKLNLKPHRVGS 372
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: F0ZL85_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZL85_DICPU) HSP 1 Score: 87.4 bits (215), Expect = 4.220e-18 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRVND 276
A ++L+G Y ++GL Y L LIDYKGFR+ A +VLP+S+E+++YGSSD G VH+ L +K+K A KKLNL+ H V
Sbjct: 319 ASNELKGLISYYMAGVKGLNYPLMALIDYKGFRLIALSVLPISNETIKYGSSDSGSIVHSNIPDLNEKMKEAGKKLNLKAHHVGS 403
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: F4PYX7_CAVFA (Histidine kinase A n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PYX7_CAVFA) HSP 1 Score: 87.0 bits (214), Expect = 5.750e-18 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRV 270
AGH+L+G Y R+ L + L LIDY+G+R+ A ++LP++SE++ YGSSDGG TVH+ED +K+K +A+ LNL+ H V
Sbjct: 542 AGHELKGLMSYYNARVEDLHHPLMALIDYRGYRLVAMSLLPINSETIVYGSSDGGITVHSEDPGFNEKMKQSAQALNLKGHLV 624
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Match: UPI000644BD45 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BD45) HSP 1 Score: 86.7 bits (213), Expect = 7.850e-18 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 22 AGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSSESLRYGSSDGGKTVHNEDESLAKKLKAAAKKLNLRTHRV 270
AGH+L+G Y R+ GL + L LIDY+G+R+ A ++LP++ E++ YGSSDGG TVHN++E +K+K +A LN++ H V
Sbjct: 402 AGHELKGLMSYYNARVDGLHHPLMALIDYRGYRLVAMSLLPINGETIVYGSSDGGITVHNQNELFNEKMKKSASILNIKEHMV 484 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14070.3180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14070.3180.1 >prot_Ecto-sp13_S_contig14070.3180.1 ID=prot_Ecto-sp13_S_contig14070.3180.1|Name=mRNA_Ecto-sp13_S_contig14070.3180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp YLSLLVGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVSback to top mRNA from alignment at Ecto-sp13_S_contig14070:148..1154- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14070.3180.1 ID=mRNA_Ecto-sp13_S_contig14070.3180.1|Name=mRNA_Ecto-sp13_S_contig14070.3180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14070:148..1154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14070:148..1154- >mRNA_Ecto-sp13_S_contig14070.3180.1 ID=mRNA_Ecto-sp13_S_contig14070.3180.1|Name=mRNA_Ecto-sp13_S_contig14070.3180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=276bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14070:148..1154- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |