mRNA_Ecto-sp13_S_contig14063.3170.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.940e-77 Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 1
Query: 1 VMLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
+ML TDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSR+LCGLAR IMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP
Sbjct: 289 IMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 412
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.240e-65 Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 1
Query: 1 VMLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
+M T ESASFF AV LSGMG GVIDTFLFIRLEELGGS +LCGLAR IMC+AEVPFFYLSGPLIRR G RGVIAL Q+AYLTRF+YYSVLREPWWVLP+EVLHGLTFAAMWAATT+YAH IAP
Sbjct: 340 IMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 463
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI) HSP 1 Score: 214 bits (545), Expect = 4.600e-65 Identity = 104/124 (83.87%), Postives = 113/124 (91.13%), Query Frame = 1
Query: 1 VMLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
+M+ T ESASFF AV LSGMG GVIDTFLFIRLEELGGS +LCGLAR IMC+AEVPFFYLSGPLIRR G RGVIAL Q+AYLTRF+YYSVLR+PWWVLP+EVLHGLTFAAMWAATT+YAH IAP
Sbjct: 285 IMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 408
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.220e-52 Identity = 82/124 (66.13%), Postives = 99/124 (79.84%), Query Frame = 1
Query: 1 VMLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
+M ++ SFF V+LSGM +GVIDTFLFI L+ELGGS +L GLA +MC EVPFFY+SG IR+ G R V+AL+Q+ Y+ R VYYSVL +PWWVLP+E+LHGLTFAAMWAATTDYAH IAP
Sbjct: 177 IMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 300
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI) HSP 1 Score: 177 bits (450), Expect = 3.850e-52 Identity = 83/124 (66.94%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 1 VMLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
+M T ++ SFF V+LSGM +GVIDTFLFI L+ELGGS +L GLA +MC EVPFFY+SG IR+ G R V+AL+Q+ Y+ R VYYSVL +PWWVLP+E+LHGLTFAAMWAATTDYAH IAP
Sbjct: 236 IMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 359
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: D7G0X7_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI) HSP 1 Score: 129 bits (324), Expect = 7.240e-37 Identity = 56/75 (74.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 148 MCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
MC++EVPFFY+SGPLIR+ G R V+AL+Q+ Y+ R VYYSVL +PWWVLP+E+LHGLTFAAMWAATTDYAH IAP
Sbjct: 1 MCLSEVPFFYVSGPLIRKIGPRNVVALSQIGYIVRLVYYSVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD) HSP 1 Score: 126 bits (316), Expect = 5.680e-32 Identity = 55/114 (48.25%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 31 FFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
FF +++SG+G G+I+TFLF+RL ELG + + G++R +MC+ E+PFF+ + L+ R G GV+ + Q AY RF +YSVL+ PW V+ EVLHG+T+ A+W ++ +AHQIAP
Sbjct: 262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSVLQNPWNVVYVEVLHGITYGALWGTSSVFAHQIAP 375
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE) HSP 1 Score: 121 bits (303), Expect = 5.390e-30 Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 31 FFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
FF + LSG G G+ID +LFI +EELGG++ + G+AR +MC AEVP F+ SG + R G G + + A++ RF+ Y+ + PW V+ SE LHGLTFA MW A T A IAP
Sbjct: 262 FFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYAFMSNPWLVVASEPLHGLTFAVMWTAATRQAFAIAP 375
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5) HSP 1 Score: 121 bits (304), Expect = 1.350e-29 Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 31 FFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
FF +V++G G GVI+TFLFI +++LGGS + G R + CM+EVP F+ SG ++ + G G + L + Y+ RF YS++R PW V+ SE LHG+TFA MWA +T YA IAP
Sbjct: 514 FFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYSLMRSPWLVVASEPLHGVTFAIMWATSTKYAADIAP 627
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Match: A0A8K0EMS7_BRALA (MFSD6 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EMS7_BRALA) HSP 1 Score: 117 bits (294), Expect = 1.530e-28 Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 31 FFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 372
F + + + G GV++TF F L++LGGS+LL GL + C+AEVPFF+ SG LI + +GV +L+ + RF++ S+L PWW +P EVLHG T+ AM+AA+T YA QIAP
Sbjct: 296 FLSVLFVLGSSFGVLETFAFWFLKDLGGSQLLLGLCLTVNCIAEVPFFFFSGKLIEKISHKGVFSLSLFCFALRFLFLSLLVNPWWAIPVEVLHGTTYGAMFAASTTYASQIAP 409 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14063.3170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig14063.3170.1 >prot_Ecto-sp13_S_contig14063.3170.1 ID=prot_Ecto-sp13_S_contig14063.3170.1|Name=mRNA_Ecto-sp13_S_contig14063.3170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp MLGTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRLLCGLARPIMCback to top mRNA from alignment at Ecto-sp13_S_contig14063:292..1184+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig14063.3170.1 ID=mRNA_Ecto-sp13_S_contig14063.3170.1|Name=mRNA_Ecto-sp13_S_contig14063.3170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=893bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14063:292..1184+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14063:292..1184+ >mRNA_Ecto-sp13_S_contig14063.3170.1 ID=mRNA_Ecto-sp13_S_contig14063.3170.1|Name=mRNA_Ecto-sp13_S_contig14063.3170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14063:292..1184+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |