mRNA_Ecto-sp13_S_contig13991.3109.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI) HSP 1 Score: 942 bits (2434), Expect = 0.000e+0 Identity = 466/478 (97.49%), Postives = 472/478 (98.74%), Query Frame = 1
Query: 1 MSGSALFFECGSDVDLARFLPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKLPTESFPSPPPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAEVGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGGAIPGLVPPDEGGTNDTSSDHEMDDSSERA 1434
MSGSALFF+CGSDVDLARF+PLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPE VTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLK SMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGK+ADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERC+KLFIGKQPGTTAGVEGAFTPDGVMYANVFQI AESAADAVDV+AHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVK PTESFPSPPPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAEVGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGGAIPGLVPPDEGGTNDTSSDHEMDDS + A
Sbjct: 1 MSGSALFFKCGSDVDLARFVPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAEVGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGGAIPGLVPPDEGGTNDTSSDHEMDDSHQSA 478
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE) HSP 1 Score: 287 bits (735), Expect = 5.890e-90 Identity = 156/275 (56.73%), Postives = 189/275 (68.73%), Query Frame = 1
Query: 43 DLARFLPLVPPVTCPL----------AGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAG-VEGAFTPDGVMYANVFQITAESAADAVDVAAHFLV 834
D LP+ P +T P+ SRSI DHNF +K+ Y+AFEAL Q P+ F S+ GR+ E IDGCAKI TD+ QF IAR ER VD D +++LK S+ISKM F R+R+VLEAAP FG NR+SN+M+RTARG++A GSP+ GD GEL++ALGD AITDLS K +DL+NIY LCF KGIS + K+ LVQC Q+LW S G GERC+KLFIGK G+TAG VEG FT D VM A+VFQITAES ADAVD+ H LV
Sbjct: 31 DAQNLLPVYPSLTLPIDSLLPRLPRVPSSRSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLV 304
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.340e-79 Identity = 140/241 (58.09%), Postives = 161/241 (66.80%), Query Frame = 1
Query: 103 SIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAH 825
SI DH F +KE Y+AFEAL QHP+ F S+ GR+PE IDGCAKI TD+ QF IAR ER VD + +++LK SMISKMVF +R+VLEAAP FG GSP+ GD GEL++ALGD AITDLS KSF DLKNIY LCF KGIS + K+ L QC Q+LW DG GERC KLFIGK G+TAGVEG FT DGVM A+VFQITAES ADAVD+ H
Sbjct: 14 SIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFG----------------PTPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELADG--EGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVH 236
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.210e-77 Identity = 165/371 (44.47%), Postives = 214/371 (57.68%), Query Frame = 1
Query: 340 MISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAG---------------RKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLVPPSLMITDIPCMLA-PIAERLH-----PWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKLPTESFPSPPPS-SATDV----VVDNIYAVYADANFSLPAQPHVNFGALLQRS-----------ARSATAEVGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADD 1341
MISKMVF +R+R+V+EAAPT NRISN+M RTARGK+A G+P+ GD G+L++ALGD AITDLS+K+ DL+NIY LC+ R + RF + L+QC W S G G ERC+++FIGK G T GVEG F DGV+YA VFQ+ ESAAD VD+ +H T +P P+ + H P G LPR+A+ V L LQH+GA A+EFPD + V++P FPSP + SA+D V +YA YA QPH++F ALLQR+ A A D SS +KR LAE+ L SLH+QG +AMTLFEVV ++ W A +A +D
Sbjct: 1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESA-GIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISH-----RQSSTTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTTTASASDAHPAQSVPTVYAAYAVGQPMPGVQPHLDFRALLQRACDVVERNREVHATEGNASGVDWSSSAKRIADLAESTLKSLHKQGWHAMTLFEVVLMYMLWFQAAAHAAPED 365
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE) HSP 1 Score: 247 bits (630), Expect = 1.410e-75 Identity = 127/238 (53.36%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 46 LARFLPLVPPVTCPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGV 759
+A L P + PL SI DHNFI +++ Y+AFE LTQHP++F SY +G PE ++IDGCAK+ +D+ + F AR ER VD D HQLLK SMISKMVF R+R+V EA PTFG NRISN+M RTARGK GS +TGD GEL++AL + DL+ K+ DLKNIY LCF G +GIS + K+ + CFQ+LW G +RC+K+FI + G TAGVEG FTPDGV
Sbjct: 1 MATTAVLSPAASVPL----SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE) HSP 1 Score: 238 bits (608), Expect = 6.830e-68 Identity = 157/440 (35.68%), Postives = 212/440 (48.18%), Query Frame = 1
Query: 97 SRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKLPTE--SFPSPPPSSAT---DVVVDNIYAVYADANFSLPAQPHVNFGALLQRSA----RSATAE-VGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKAD----DGGAIPGLVPPD 1374
++ I DHNFI +++ Y+AFE LTQHP++F SY +G PE ++IDGCAK+ +D+ + F AR ER VD D HQLLK SMISKM + + CFQ+LW G +RC+K+FI + G TAGVEG FTPDGV+ +++ Q+ + PS+++TDIPCM+AP AE+ P LL+N G LPR+A G VSLP LQH+GA +++PD H V++P +F S SS D + N+Y +A A S P QPH++F ALL+ + R+ + D SS KR LAE L LHQQGCYA+ LFEVV ++ W A A GG G PP+
Sbjct: 4 AKLIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKM----------------------------------------------------------------------------------------EDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATA-LSGPVQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKRISELAETSLRYLHQQGCYALNLFEVVLAYALWFQEASVADPHVHLLQGGRESGGDPPE 354
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.100e-56 Identity = 132/289 (45.67%), Postives = 166/289 (57.44%), Query Frame = 1
Query: 670 GAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKLPTESFPSP-------PPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSA--RSATAEVGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGGAIPGLVPPDEG----GTNDTSSDHEMDDSSERAMDDLSLSELCSISQFSEKVLR 1497
G GERC+KLF+GK GTTAGVEG FT DGV FQ+T ESAAD VD+ AH LV P L+ITDIPC + PIAERL P LL++ G LPRDA+G V L LQH+GAHA+EFPDEH VK+P FP+ P A + QPHV+F +LL+R+A + V D SS R LAE+ L LH++G YAMTL+EVV ++ W A + G PG V EG G ++T E+ + LS SEL +I+ + + VLR
Sbjct: 5 GEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRRAADAQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLLYYLWFQATGWATPE--GEAPGAVAGAEGEGGRGGDNTPPLREISE--------LSRSELATITSYLKGVLR 283
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE) HSP 1 Score: 189 bits (480), Expect = 2.380e-54 Identity = 95/155 (61.29%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 103 SIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEFVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKFSMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNI 567
SI DHNF +K+ Y+AFEAL QHP+ F S+ GR+PE IDGCAKI TD+ QF AR ER VD D +++LK SMISKMVF R+R+VLEAAP G NR+SN+M RTARG++A GSP+ GD GEL++ALGD AITDLS KS +DLKNI
Sbjct: 14 SIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.860e-50 Identity = 91/166 (54.82%), Postives = 115/166 (69.28%), Query Frame = 1
Query: 337 SMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLV 834
SMISKMVF R+R+V EA PTFG NRISN+M RTARGK GSP+TGD GEL++AL + DL+ K+ DLKNIY LCF G +GIS + K+ + CFQ+LW G +RC+K+FI + G TAGVEG FTPDGV+ +++ Q+T+ES AD VD H V
Sbjct: 2 SMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAV 167
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.920e-47 Identity = 95/166 (57.23%), Postives = 112/166 (67.47%), Query Frame = 1
Query: 337 SMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKVADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCAKLFIGKQPGTTAGVEGAFTPDGVMYANVFQITAESAADAVDVAAHFLV 834
SMI KM+F R+R+VLEAAPTFG NR+SN+M RTARG++A GSP+ GD GEL++ALGD A+TDLS KS + LVQC Q+LW S G ERC+KLFIGK G+TAGVEG FT DGVM A+VFQITAES ADAVD+ H LV
Sbjct: 2 SMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLV 143 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13991.3109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13991.3109.1 >prot_Ecto-sp13_S_contig13991.3109.1 ID=prot_Ecto-sp13_S_contig13991.3109.1|Name=mRNA_Ecto-sp13_S_contig13991.3109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=499bp MSGSALFFECGSDVDLARFLPLVPPVTCPLAGSRSIADHNFIETLKECYYback to top mRNA from alignment at Ecto-sp13_S_contig13991:587..3091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13991.3109.1 ID=mRNA_Ecto-sp13_S_contig13991.3109.1|Name=mRNA_Ecto-sp13_S_contig13991.3109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2505bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13991:587..3091- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13991:587..3091- >mRNA_Ecto-sp13_S_contig13991.3109.1 ID=mRNA_Ecto-sp13_S_contig13991.3109.1|Name=mRNA_Ecto-sp13_S_contig13991.3109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1497bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13991:587..3091- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |