prot_Ecto-sp13_S_contig13960.3089.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13960.3089.1
Unique Nameprot_Ecto-sp13_S_contig13960.3089.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length467
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13960.3089.1 vs. uniprot
Match: D7FKM0_ECTSI (HECT-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM0_ECTSI)

HSP 1 Score: 671 bits (1730), Expect = 1.350e-226
Identity = 390/471 (82.80%), Postives = 402/471 (85.35%), Query Frame = 0 
Query:    2 AQREGRARERLHVSSATTIQKIWRGRSCVGKWRQDERDAWDRKMHDVGRVKAMLAAAGKALQLPPAVLQTLLSELVHFHAFPCDAGRFRAAIDLVLAAAPASDSPATPEGAGLFAAQPASSGGSDSDRLLMDNTWSLLVTRLGAVSLQYMSQVSATAAAAGGRSRKNGAESRDNGGGRR-CKGDAMEDAEGVEVAVVAGEGSAEVGDAAAVAMRGFALLASPAAWRHRWPLSEPAVVQRRCRVFLASLALGRVLLGTRSKTGAEAGPGEALTKSSPRGRERG----GVRLLLRTERERVGGEGSRAPTLFGVLRVAWDAAAAEAGVGEGRATQTVRLLCASSFQVLGIGVAEDGESTARGETRPMSSSAVAXXXXXXXXXXXXXXXXXXXXXDRRRLLEAFAAAVLPAPRLLEHPLRAALMDPMLGGDGAAWWELVSVAGEAVGAGGTXXXXXXXXXXRDVAWAVANILEV 467
            AQREGRARERLHVSSATTIQK+WRGRSCVGKWRQDERDAWDRKMHDVGRVKAMLAAAGKALQLPPAVLQ+LLS+LVHFHAFP DAGRFRAA+DLVLAAAPASD+  TP GAGLFAAQPASS GSD+DRLL DNTWSLLVTRLGAV LQYMSQVSATAAAAGGRSRKNGAESRD GGG   C+GDAM+DAE           SAEV DAA VAMRGFALLASPAAWRHRW LSEP  V+RRCRVFLASLALGRVL+ TRSKTG EAGPGEAL K SP          G+RL LRTERERVGGEGSRAPTLFGVLRVAWDAA AEAG GEGRATQ VRLLCASSFQ+LGIGVAEDGESTAR ETRPMSSSAVA                     DRRRLLEAFAAAVLPAPRLLEHPLRAALMDPMLGGDG AWWELVSVAGEAVGAGGT XXXXXXXXXRDVAWAVANILEV
Sbjct:   32 AQREGRARERLHVSSATTIQKVWRGRSCVGKWRQDERDAWDRKMHDVGRVKAMLAAAGKALQLPPAVLQSLLSQLVHFHAFPSDAGRFRAAMDLVLAAAPASDNATTPGGAGLFAAQPASSSGSDNDRLLGDNTWSLLVTRLGAVCLQYMSQVSATAAAAGGRSRKNGAESRDIGGGXXXCEGDAMDDAEXXXXXXXXXXXSAEVVDAAEVAMRGFALLASPAAWRHRWSLSEPVAVKRRCRVFLASLALGRVLMRTRSKTGEEAGPGEALRKPSPTXXXXXXXXEGLRLSLRTERERVGGEGSRAPTLFGVLRVAWDAAVAEAGGGEGRATQAVRLLCASSFQILGIGVAEDGESTARIETRPMSSSAVAGGGARAAAGPGGAHETAVP--DRRRLLEAFAAAVLPAPRLLEHPLRAALMDPMLGGDGVAWWELVSVAGEAVGAGGTGXXXXXXXXXRDVAWAVANILEV 500
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13960.3089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKM0_ECTSI1.350e-22682.80HECT-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13960contigEcto-sp13_S_contig13960:1698..4061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13960.3089.1mRNA_Ecto-sp13_S_contig13960.3089.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13960 1698..4061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13960.3089.1 ID=prot_Ecto-sp13_S_contig13960.3089.1|Name=mRNA_Ecto-sp13_S_contig13960.3089.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=467bp
QAQREGRARERLHVSSATTIQKIWRGRSCVGKWRQDERDAWDRKMHDVGR
VKAMLAAAGKALQLPPAVLQTLLSELVHFHAFPCDAGRFRAAIDLVLAAA
PASDSPATPEGAGLFAAQPASSGGSDSDRLLMDNTWSLLVTRLGAVSLQY
MSQVSATAAAAGGRSRKNGAESRDNGGGRRCKGDAMEDAEGVEVAVVAGE
GSAEVGDAAAVAMRGFALLASPAAWRHRWPLSEPAVVQRRCRVFLASLAL
GRVLLGTRSKTGAEAGPGEALTKSSPRGRERGGVRLLLRTERERVGGEGS
RAPTLFGVLRVAWDAAAAEAGVGEGRATQTVRLLCASSFQVLGIGVAEDG
ESTARGETRPMSSSAVAEGGGGGGAVAVPGGAHETTAPDRRRLLEAFAAA
VLPAPRLLEHPLRAALMDPMLGGDGAAWWELVSVAGEAVGAGGTGGGGGA
AARRRDVAWAVANILEV
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