prot_Ecto-sp13_S_contig13940.3079.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13940.3079.1
Unique Nameprot_Ecto-sp13_S_contig13940.3079.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length207
Homology
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.270e-143
Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELLK 206
            MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKP++YVPMIAYGRSKLAN+LDAKAFAG LSDRRINTYALHPGVVNTDLFRN TDGRLISRVFRV KSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQV+PSALASDPANPPRLWEITEELLETKLGKKIE LLK
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLLK 206          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 4.650e-92
Identity = 138/211 (65.40%), Postives = 162/211 (76.78%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGW------DWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELL 205
            MAIP    TVDGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+ H+          D+DNVNY KPD Y   +AYGRSKLANILDAK FA RL  R I+TYA HPG+VNT+L RN TD  L+SRV R+   L  F+LA+PLTG+LTT+RCA+DP+LAGPEFSGKYW +MK+  PS LA DPANPPRLWE+TE +LE KLGK +++LL
Sbjct:  125 MAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 2.630e-76
Identity = 120/209 (57.42%), Postives = 145/209 (69.38%), Query Frame = 0
Query:    3 IPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGG------WDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRV-VKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEEL 204
            +P    T DGLE  IGVNHFG HLLTRLME  I DGGRV+FLSS+ H          WDWDN+N+ KP  Y  + AY RSKLANI DAK FA RL+ R INTYA+ PG+V T++ R    G+LI  +      +LG   L  PL G+LTT+RCA+DP LAGPE SGKYW +MK+  PS LA DPANPPRLWEITE +LE KLGK+++++
Sbjct:  129 VPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDV 337          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.760e-75
Identity = 120/210 (57.14%), Postives = 149/210 (70.95%), Query Frame = 0
Query:    3 IPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGG------WDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRV-VKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELL 205
            +P    T DGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+AH          WDWDNVN+ KP  Y  + AY RSKLANI DAK FA RL+ R INTYA+ PG+V T++ R    G+L+  +      +LG   L  PL G+LTT+RCA+DP+LAGPE SGKYW +MK+  PS LA DPANPPRLWE+TE +LE KLGK++++++
Sbjct:  276 VPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 2.270e-74
Identity = 112/127 (88.19%), Postives = 120/127 (94.49%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVV 127
            MAIPTE+R+VDGLEKQIGVNHF THLL+RLM KQIIDGGRVVF SSVAHKHGG DWDNVNYTKP+E+ PMIAYGRSKLAN+LDAK FAG LSDRRINTYALHPGVVNTDLFRNATDGRLISR+F+VV
Sbjct:   78 MAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKHGGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRMFQVV 204          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 141 bits (356), Expect = 1.940e-37
Identity = 83/200 (41.50%), Postives = 113/200 (56.50%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQI--IDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLG 198
            MA P +  T DGLE QIG NHFG  LLT L+  ++      R+V LSS+AH      WD++N  K  +Y    AYG+SKLANIL     + RL    +   ++HPG VNTDL R+   G     +F+++K L      +P+ G+ TTL CA+ P L   E SGKY+   K+  PS      A+  RLWE+TEE+++ KL 
Sbjct:  103 MACP-KTLTKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHAFASIKWDDINSDK--KYGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRG-----IFKLLKPLSKLFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKLS 292          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A8K0JWE7_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0JWE7_LADFU)

HSP 1 Score: 140 bits (352), Expect = 9.230e-37
Identity = 87/198 (43.94%), Postives = 119/198 (60.10%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETK 196
            MA P + +T DG E Q+GVNH G  LLT L+  +I      R+V +SS+AHK G +++D++NY K   Y   +AY RSKLANIL  K  A RL    + TYALHPGVV T+L R+  D  L+  +  + +++G  V  SP+ GS TT+ CA+D   A    +G Y+S  +   PSA A DPA   RLWE + + +E K
Sbjct:  133 MACP-QGKTKDGHELQLGVNHLGHFLLTCLLINRICASREPRIVNVSSMAHKWGDFNFDDINYEKTP-YSATMAYSRSKLANILFTKELAKRLQGTGVRTYALHPGVVATELGRHL-DSTLLPGMSWIFRNVGKVVAKSPVQGSQTTIYCAVDEKTANE--TGLYYSDCRVKTPSAKAKDPALASRLWEESLKWVELK 325          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A1B6KSJ8_9HEMI (Uncharacterized protein n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KSJ8_9HEMI)

HSP 1 Score: 133 bits (334), Expect = 2.680e-34
Identity = 80/186 (43.01%), Postives = 107/186 (57.53%), Query Frame = 0
Query:    9 TVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEEL 192
            T DG E Q G NH G  L T L+  +II     R++ LSSVAH  G  D+D++N+ K   Y PM AYG+SKLAN+L +K  A RL DR++ TYALHPGV+ T+L R+  D        ++  +LG F   +   G+ TTL CA+D  L     +G Y+S     +PSA+A D     RLWE +  L
Sbjct:  119 TEDGFEMQFGTNHLGHFLFTCLLLPRIISSAPSRIITLSSVAHARGQIDFDDLNWKKRS-YSPMAAYGQSKLANVLFSKELARRLGDRKVTTYALHPGVIRTELGRHM-DSVYFKGSRQLAATLGYFFYKTLDQGAQTTLHCALDQDLGSQ--TGLYYSDCITKEPSAVAKDEEVARRLWEESARL 300          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: UPI0015AD23C8 (retinol dehydrogenase 12-like isoform X1 n=3 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AD23C8)

HSP 1 Score: 129 bits (324), Expect = 1.160e-32
Identity = 79/191 (41.36%), Postives = 113/191 (59.16%), Query Frame = 0
Query:    6 EERTVDGLEKQIGVNHFGTHLLTRLMEKQI--IDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVV-KSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELL 193
            + +T DG E Q GVNH G  LLT L+ ++I      R+V +SS+AH  G  +++++N      Y P++AY RSKLANIL  +  A RL    INTY LHPGVV+T L R+   G  ISR+  V+ +        SP  G+ TT+ CA++ +LA    SG Y+S   +V+PS  A+D     +LWE++E L+
Sbjct:  148 KSKTEDGFEMQFGVNHLGHFLLTNLLLERIKVSSPARIVNVSSLAHIFGKINFNDINLDHG--YHPLLAYARSKLANILFTRELAKRLKGTGINTYCLHPGVVHTGLGRHL--GHSISRIIGVIYQGCSRMFFLSPYKGAQTTIYCAVEESLAYD--SGYYYSDCTKVQPSTRATDDDLAKKLWEVSENLV 332          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: UPI000C760266 (LOW QUALITY PROTEIN: retinol dehydrogenase 12-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C760266)

HSP 1 Score: 131 bits (329), Expect = 1.340e-32
Identity = 82/204 (40.20%), Postives = 118/204 (57.84%), Query Frame = 0
Query:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG---RVVFLSSVAHKHGGWDWDNVNYT-KPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATD--------GRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEEL 192
            MA P   RT DGLE QIG NHFG  LLT L+   +  GG   RVV +SS+AH  G  +W+++NY  K   Y+PM+AY +SKLANIL +     R ++  INTY+LHPGV+ TDL+R+  D          LI+  F+ V+S           G+ T+L C +D ++     +G+Y+S  ++   +  A   A+  RLWE++E+L
Sbjct:  247 MACPLS-RTEDGLEMQIGTNHFGHFLLTNLLLPLLRKGGPGTRVVTVSSIAHTSGMINWEDINYEDKKTTYLPMLAYRQSKLANILFSNELGIREAEHGINTYSLHPGVIATDLWRHLGDKPIIGTLLNNLITPFFKTVES-----------GAQTSLFCCLDESIEN--HTGRYYSDCREKIAAPQALSRADGKRLWELSEKL 436          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL4_ECTSI1.270e-14396.12Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
D8LPM3_ECTSI4.650e-9265.40Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
A0A6H5JP92_9PHAE2.630e-7657.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP30_ECTSI2.760e-7557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGN4_9PHAE2.270e-7488.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433SZU2_ELYCH1.940e-3741.50Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A8K0JWE7_LADFU9.230e-3743.94Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1B6KSJ8_9HEMI2.680e-3443.01Uncharacterized protein n=5 Tax=Cicadellinae TaxID... [more]
UPI0015AD23C81.160e-3241.36retinol dehydrogenase 12-like isoform X1 n=3 Tax=S... [more]
UPI000C7602661.340e-3240.20LOW QUALITY PROTEIN: retinol dehydrogenase 12-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..198
e-value: 6.7E-38
score: 132.4
NoneNo IPR availablePANTHERPTHR43157:SF2DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 13coord: 4..195
NoneNo IPR availablePANTHERPTHR43157FAMILY NOT NAMEDcoord: 4..195
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 6..116
e-value: 9.6E-6
score: 25.2
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13940contigEcto-sp13_S_contig13940:236..856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13940.3079.1mRNA_Ecto-sp13_S_contig13940.3079.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13940 87..1324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13940.3079.1 ID=prot_Ecto-sp13_S_contig13940.3079.1|Name=mRNA_Ecto-sp13_S_contig13940.3079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHK
HGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYA
LHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAI
DPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKK
IEELLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf