mRNA_Ecto-sp13_S_contig13940.3079.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13940.3079.1
Unique NamemRNA_Ecto-sp13_S_contig13940.3079.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D7FTL4_ECTSI (Similar to Retinol dehydrogenase 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL4_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 8.230e-141
Identity = 198/206 (96.12%), Postives = 202/206 (98.06%), Query Frame = 3
Query:  150 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELLK 767
            MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKP++YVPMIAYGRSKLAN+LDAKAFAG LSDRRINTYALHPGVVNTDLFRN TDGRLISRVFRV KSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQV+PSALASDPANPPRLWEITEELLETKLGKKIE LLK
Sbjct:    1 MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPNKYVPMIAYGRSKLANVLDAKAFAGHLSDRRINTYALHPGVVNTDLFRNVTDGRLISRVFRVAKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVQPSALASDPANPPRLWEITEELLETKLGKKIENLLK 206          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 5.110e-118
Identity = 176/260 (67.69%), Postives = 208/260 (80.00%), Query Frame = 3
Query:    3 GVDLLEGLSDVDVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGW------DWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELL 764
            GVDLLEGL+DVDV++EVLDLG L+SV++FAQR K+SG K+DVLINNAGIMAIP    TVDGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+ H+          D+DNVNY KPD Y   +AYGRSKLANILDAK FA RL  R I+TYA HPG+VNT+L RN TD  L+SRV R+   L  F+LA+PLTG+LTT+RCA+DP+LAGPEFSGKYW +MK+  PS LA DPANPPRLWE+TE +LE KLGK +++LL
Sbjct:   76 GVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEMQIGVNHFGGHLLTRLMEPLMNDGGRVIFLSSLGHRQPPGQAKVTLDFDNVNYEKPDTYNSWMAYGRSKLANILDAKEFAKRLEARGISTYACHPGIVNTELMRNMTDSSLMSRVTRLTAPLSRFILATPLTGALTTIRCAVDPSLAGPEFSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEAKLGKNVDDLL 335          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A6H5JGN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGN4_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 1.990e-104
Identity = 159/176 (90.34%), Postives = 169/176 (96.02%), Query Frame = 3
Query:    3 GVDLLEGLSDVDVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVV 530
            GVDLLEGLSDVDVQVEVLDLGVL+SVVSFAQRLKSSGQKIDVLI+NAGIMAIPTE+R+VDGLEKQIGVNHF THLL+RLM KQIIDGGRVVF SSVAHKHGG DWDNVNYTKP+E+ PMIAYGRSKLAN+LDAK FAG LSDRRINTYALHPGVVNTDLFRNATDGRLISR+F+VV
Sbjct:   29 GVDLLEGLSDVDVQVEVLDLGVLQSVVSFAQRLKSSGQKIDVLIDNAGIMAIPTEKRSVDGLEKQIGVNHFVTHLLSRLMGKQIIDGGRVVFFSSVAHKHGGCDWDNVNYTKPNEHGPMIAYGRSKLANVLDAKGFAGHLSDRRINTYALHPGVVNTDLFRNATDGRLISRMFQVV 204          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 3.570e-100
Identity = 154/260 (59.23%), Postives = 190/260 (73.08%), Query Frame = 3
Query:    3 GVDLLEGLSDVDVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGG------WDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRV-VKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEEL 761
            GVDLL+GL++VDV++EVLDLG L+SV++FAQ  K+SG K+DVL+NNAGI  +P    T DGLE  IGVNHFG HLLTRLME  I DGGRV+FLSS+ H          WDWDN+N+ KP  Y  + AY RSKLANI DAK FA RL+ R INTYA+ PG+V T++ R    G+LI  +      +LG   L  PL G+LTT+RCA+DP LAGPE SGKYW +MK+  PS LA DPANPPRLWEITE +LE KLGK+++++
Sbjct:   78 GVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEMHIGVNHFGGHLLTRLMEPSINDGGRVLFLSSLTHSRPPGMPKTTWDWDNMNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLIMPIVNAGYAALGWVWLKGPLDGALTTIRCAVDPCLAGPELSGKYWGNMKEETPSELALDPANPPRLWEITESVLEDKLGKRVDDV 337          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 5.360e-100
Identity = 156/261 (59.77%), Postives = 195/261 (74.71%), Query Frame = 3
Query:    3 GVDLLEGLSDVDVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHKHGG------WDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRV-VKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKKIEELL 764
            GVDLL+GL++VDV++EVLDLG L+SVV+FAQR K+SG K+DVL+NNAGI  +P    T DGLE QIGVNHFG HLLTRLME  + DGGRV+FLSS+AH          WDWDNVN+ KP  Y  + AY RSKLANI DAK FA RL+ R INTYA+ PG+V T++ R    G+L+  +      +LG   L  PL G+LTT+RCA+DP+LAGPE SGKYW +MK+  PS LA DPANPPRLWE+TE +LE KLGK++++++
Sbjct:  225 GVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEMQIGVNHFGGHLLTRLMEPSMNDGGRVLFLSSLAHSRPPGMPKTTWDWDNVNFDKPKTYDRLSAYCRSKLANIWDAKEFAKRLAARSINTYAVQPGLVKTEIHRGIGGGKLMMPIVNAGYVALGWVWLKGPLDGALTTVRCAVDPSLAGPELSGKYWGNMKEETPSELALDPANPPRLWEVTESVLEEKLGKRVDDVV 485          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A433SZU2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SZU2_ELYCH)

HSP 1 Score: 177 bits (448), Expect = 1.830e-48
Identity = 100/247 (40.49%), Postives = 145/247 (58.70%), Query Frame = 3
Query:    9 DLLEGLSDVDVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQI--IDGGRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLG 743
            +++E   + DV V+ LDL   +S+ +FA++   +  ++D+LINNAG+MA P +  T DGLE QIG NHFG  LLT L+  ++      R+V LSS+AH      WD++N  K  +Y    AYG+SKLANIL     + RL    +   ++HPG VNTDL R+   G     +F+++K L      +P+ G+ TTL CA+ P L   E SGKY+   K+  PS      A+  RLWE+TEE+++ KL 
Sbjct:   56 EIVEETKNEDVVVQELDLASFESIQNFAKKFNETETRLDILINNAGVMACP-KTLTKDGLEMQIGTNHFGHFLLTNLLLDKLKACSPSRIVILSSMAHAFASIKWDDINSDK--KYGDWAAYGQSKLANILHCLELSNRLKGTGVTVNSVHPGGVNTDLQRHTNRG-----IFKLLKPLSKLFFKTPVDGAQTTLYCALSPDLE--EVSGKYFVDCKEKAPSRRGQSEADAKRLWELTEEIIQQKLS 292          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A8K0JWE7_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0JWE7_LADFU)

HSP 1 Score: 165 bits (418), Expect = 5.710e-44
Identity = 106/238 (44.54%), Postives = 146/238 (61.34%), Query Frame = 3
Query:   39 VQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAG---IMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETK 737
            V+V  LDL  L SV  FAQ++ ++  +I++LINNAG   IMA P + +T DG E Q+GVNH G  LLT L+  +I      R+V +SS+AHK G +++D++NY K   Y   +AY RSKLANIL  K  A RL    + TYALHPGVV T+L R+  D  L+  +  + +++G  V  SP+ GS TT+ CA+D   A    +G Y+S  +   PSA A DPA   RLWE + + +E K
Sbjct:   93 VEVYHLDLTSLDSVRQFAQKILATESEINLLINNAGEEGIMACP-QGKTKDGHELQLGVNHLGHFLLTCLLINRICASREPRIVNVSSMAHKWGDFNFDDINYEKTP-YSATMAYSRSKLANILFTKELAKRLQGTGVRTYALHPGVVATELGRHL-DSTLLPGMSWIFRNVGKVVAKSPVQGSQTTIYCAVDEKTANE--TGLYYSDCRVKTPSAKAKDPALASRLWEESLKWVELK 325          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A6A4VL08_AMPAM (Retinol dehydrogenase 12 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VL08_AMPAM)

HSP 1 Score: 161 bits (407), Expect = 3.600e-42
Identity = 102/246 (41.46%), Postives = 148/246 (60.16%), Query Frame = 3
Query:   54 LDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRN-ATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKL-GKKIEELLK*SAS 779
            LDL  L+SV  FAQ + +   KI++LINNAG+MA P  E T +G E Q+GVNH G  LLT L+ +++++    R+V LSS+AH  G   +D++   +   Y    AY +SKLAN+L  +  A RL   R+ TYA+HPG+V TDL+R+     RL+  +F+           +P  G+ TTL CA+ P LA    SG+Y+S  K+ +PSA A +  +  RLWEI+EEL+   L G  + +L + SA+
Sbjct:   78 LDLASLQSVRDFAQEVLAQADKINLLINNAGVMACPRAE-TKEGFEMQLGVNHLGHFLLTLLLLERLVNSAPSRIVNLSSLAHTRGKMHFDDLMLKRG--YGDWKAYYQSKLANVLFTRELARRLLGTRVTTYAVHPGIVRTDLWRHQGCFDRLLQPMFK-----------TPEQGAQTTLYCALAPELA--TLSGRYYSDCKEKQPSARARNDEDAARLWEISEELVGVGLQGNSVTQLRQGSAT 307          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A553N7Y6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N7Y6_TIGCA)

HSP 1 Score: 160 bits (405), Expect = 3.690e-42
Identity = 97/239 (40.59%), Postives = 143/239 (59.83%), Query Frame = 3
Query:   39 VQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTR----LMEKQIIDG--GRVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETK 737
            V+V  LDL  LKSV   A+ L +S  KID+LINNAG+M  P   +T DG + Q G NH G  LLT     L+ K    G   R++ LSS+AHK    +WD++NY K   Y  + AY +SKLAN+L AK  A RLSD  I+ YA+HPG V+T+L R+  + +  +++F   K   + +   P+ G+ TTL CA+D ++A    SGKY++  ++ +P + A    +  RLW+++E+ +  K
Sbjct:   99 VEVRRLDLASLKSVRECAEALVASEDKIDILINNAGVMLCP-HWKTEDGFDMQFGTNHLGHFLLTEMLMPLIRKSEASGFHPRIIILSSLAHKGAPINWDDINYEK--SYSAIAAYAQSKLANVLHAKELAERLSDTEISVYAVHPGAVDTELGRHFYN-KWWAKLF---KPCASRLFKQPIHGAQTTLYCALDDSVAND--SGKYYADCRETRPHSRALRKEDQKRLWDLSEKFVGLK 328          
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Match: A0A1B6KSJ8_9HEMI (Uncharacterized protein n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KSJ8_9HEMI)

HSP 1 Score: 159 bits (403), Expect = 5.230e-42
Identity = 100/232 (43.10%), Postives = 134/232 (57.76%), Query Frame = 3
Query:   36 DVQVEVLDLGVLKSVVSFAQRLKSSGQKIDVLINNAGIMAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGG--RVVFLSSVAHKHGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYALHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAIDPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEEL 725
            +V V+ LDL  L SV   A+ L  + + ID+LINNAG+M  P    T DG E Q G NH G  L T L+  +II     R++ LSSVAH  G  D+D++N+ K   Y PM AYG+SKLAN+L +K  A RL DR++ TYALHPGV+ T+L R+  D        ++  +LG F   +   G+ TTL CA+D  L     +G Y+S     +PSA+A D     RLWE +  L
Sbjct:   74 EVVVQKLDLSSLTSVRECAKILLETERHIDILINNAGVMMCPYAS-TEDGFEMQFGTNHLGHFLFTCLLLPRIISSAPSRIITLSSVAHARGQIDFDDLNWKKRS-YSPMAAYGQSKLANVLFSKELARRLGDRKVTTYALHPGVIRTELGRHM-DSVYFKGSRQLAATLGYFFYKTLDQGAQTTLHCALDQDLGSQ--TGLYYSDCITKEPSAVAKDEEVARRLWEESARL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13940.3079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL4_ECTSI8.230e-14196.12Similar to Retinol dehydrogenase 12 n=1 Tax=Ectoca... [more]
D8LPM3_ECTSI5.110e-11867.69Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
A0A6H5JGN4_9PHAE1.990e-10490.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP92_9PHAE3.570e-10059.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP30_ECTSI5.360e-10059.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A433SZU2_ELYCH1.830e-4840.49Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A8K0JWE7_LADFU5.710e-4444.54Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A6A4VL08_AMPAM3.600e-4241.46Retinol dehydrogenase 12 n=2 Tax=Amphibalanus amph... [more]
A0A553N7Y6_TIGCA3.690e-4240.59Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A1B6KSJ8_9HEMI5.230e-4243.10Uncharacterized protein n=5 Tax=Cicadellinae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13940contigEcto-sp13_S_contig13940:87..1324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score406.0
Seed ortholog evalue1.1e-110
Seed eggNOG ortholog2880.D7FTL4
Model size1238
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-06_008680.1
Cds size621
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462744.1938026-UTR-Ecto-sp13_S_contig13940:86..2351681462744.1938026-UTR-Ecto-sp13_S_contig13940:86..235Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13940 87..235 +
1681462744.2142284-UTR-Ecto-sp13_S_contig13940:856..13241681462744.2142284-UTR-Ecto-sp13_S_contig13940:856..1324Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13940 857..1324 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462744.2041216-CDS-Ecto-sp13_S_contig13940:235..8561681462744.2041216-CDS-Ecto-sp13_S_contig13940:235..856Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13940 236..856 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13940.3079.1prot_Ecto-sp13_S_contig13940.3079.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13940 236..856 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13940.3079.1

>prot_Ecto-sp13_S_contig13940.3079.1 ID=prot_Ecto-sp13_S_contig13940.3079.1|Name=mRNA_Ecto-sp13_S_contig13940.3079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp
MAIPTEERTVDGLEKQIGVNHFGTHLLTRLMEKQIIDGGRVVFLSSVAHK
HGGWDWDNVNYTKPDEYVPMIAYGRSKLANILDAKAFAGRLSDRRINTYA
LHPGVVNTDLFRNATDGRLISRVFRVVKSLGAFVLASPLTGSLTTLRCAI
DPALAGPEFSGKYWSHMKQVKPSALASDPANPPRLWEITEELLETKLGKK
IEELLK*
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mRNA from alignment at Ecto-sp13_S_contig13940:87..1324+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13940.3079.1 ID=mRNA_Ecto-sp13_S_contig13940.3079.1|Name=mRNA_Ecto-sp13_S_contig13940.3079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1238bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13940:87..1324+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGGGAGTTGATCTGCTCGAGGGACTCAGCGATGTCGATGTGCAAGTGGAG GTCCTAGACTTGGGAGTGCTGAAGTCCGTGGTCTCCTTCGCGCAGAGACT GAAGTCGTCCGGCCAGAAAATCGACGTCCTCATTAACAACGCCGGGATCA TGGCCATCCCCACCGAGGAGCGTACTGTAGACGGCCTCGAGAAACAGATC GGGGTGAATCACTTCGGCACGCACCTTCTAACCAGATTGATGGAAAAGCA GATCATCGATGGAGGTCGCGTGGTGTTCCTCTCTTCCGTGGCGCACAAAC ATGGCGGTTGGGACTGGGACAACGTGAACTACACCAAGCCCGACGAGTAC GTGCCCATGATTGCGTACGGTCGGTCCAAGCTCGCAAACATCCTGGACGC GAAGGCGTTCGCCGGCCGCCTGAGCGATCGCAGGATCAACACGTACGCGC TACATCCAGGGGTGGTCAACACGGACCTCTTTCGGAACGCTACCGACGGC CGCTTAATCTCTCGCGTGTTTCGGGTGGTTAAGTCTCTCGGTGCTTTTGT GCTGGCGTCCCCCCTCACGGGGTCGTTGACCACCCTGCGATGTGCGATTG ATCCAGCACTCGCCGGTCCCGAGTTTTCGGGAAAATATTGGTCCCACATG AAGCAAGTCAAGCCGTCGGCGCTGGCGTCGGACCCTGCCAACCCGCCTCG CCTTTGGGAAATCACGGAGGAACTGCTGGAGACGAAGCTGGGAAAGAAGA TCGAAGAACTCCTGAAGTAGTCAGCTAGTTTATGAAGGTAGCCGAGACAA GACAGCCAGTTGCTTGCAACAAAGTCCATGCCTTGTAACAATAACCTTGT GCAGTTCATGCTAATCAGCATGCTTTTTTCAAACGATTCACTCGGGAACT GTCTTGACGCGGACTTATTTTCGGCGGCTGTGCCCAAAGGGGGTGGTTGT TTAGGCGGTAGGTGATACTGCGATCATTGGCGGTGTCGACTTTGACGGAC GCGGTAAAACCTATGGCGGTGAGTTTTTGGCAGTAATGTCATGTGGCAGA AGTTGTTTGGGCGGTAGGAGGTATTGGGGCAGCAGAATCGCTTTGAGTTG GCCCCAGGATTATTTTATTTCGTTTTTTACACCCCTCTGCCTTTGCGTTA GCCCCGGGGTGTCCGTGTTCCGACAAGTTACTGGGGTGCCACACGTGGCG TCGCACACAAACCCACGGACGGCATTCCAGGCAGCATT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13940:87..1324+

>mRNA_Ecto-sp13_S_contig13940.3079.1 ID=mRNA_Ecto-sp13_S_contig13940.3079.1|Name=mRNA_Ecto-sp13_S_contig13940.3079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13940:87..1324+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCATCCCCACCGAGGAGCGTACTGTAGACGGCCTCGAGAAACAGAT
CGGGGTGAATCACTTCGGCACGCACCTTCTAACCAGATTGATGGAAAAGC
AGATCATCGATGGAGGTCGCGTGGTGTTCCTCTCTTCCGTGGCGCACAAA
CATGGCGGTTGGGACTGGGACAACGTGAACTACACCAAGCCCGACGAGTA
CGTGCCCATGATTGCGTACGGTCGGTCCAAGCTCGCAAACATCCTGGACG
CGAAGGCGTTCGCCGGCCGCCTGAGCGATCGCAGGATCAACACGTACGCG
CTACATCCAGGGGTGGTCAACACGGACCTCTTTCGGAACGCTACCGACGG
CCGCTTAATCTCTCGCGTGTTTCGGGTGGTTAAGTCTCTCGGTGCTTTTG
TGCTGGCGTCCCCCCTCACGGGGTCGTTGACCACCCTGCGATGTGCGATT
GATCCAGCACTCGCCGGTCCCGAGTTTTCGGGAAAATATTGGTCCCACAT
GAAGCAAGTCAAGCCGTCGGCGCTGGCGTCGGACCCTGCCAACCCGCCTC
GCCTTTGGGAAATCACGGAGGAACTGCTGGAGACGAAGCTGGGAAAGAAG
ATCGAAGAACTCCTGAAGTAG
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