mRNA_Ecto-sp13_S_contig13924.3065.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI) HSP 1 Score: 273 bits (698), Expect = 1.810e-82 Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQ 399
GSDR+ALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTY+AVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQ
Sbjct: 705 GSDRIALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQ 837
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A4D9CZK3_9STRA (RIC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK3_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.520e-33 Identity = 63/135 (46.67%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASR--HKHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFMQ 399
G + +A ++ +PW+ ++L W + V P Y S N P+ V+ S +G +AVAG RG A+YSRP RWRLFGN+ QERE++VAGM WWGE A+VV ++ + G +L++SR HL + +L+ P+ LP G RPLF++
Sbjct: 521 GVNTLAFLEQRPWNPRLLSWAHVTVPPAY-SVNVPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQERELEVAGMTWWGEDAVVVVAKLWSRAGCDILVYSRHHLDNSSLLCDPVPLPPGTRPLFLE 654
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A1Y1I3Y9_KLENI (RIC1 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3Y9_KLENI) HSP 1 Score: 86.3 bits (212), Expect = 4.970e-17 Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 7 DRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHK---HGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFM 396
DRV LV S L V+P + YL++N P+ HV+ + G+Y+A+AG RG +Y+ RWR+FG+I QE++V G+ W G +VVA H+ + F L L+ R HL +L+ RLP+ RP+ M
Sbjct: 435 DRVLLVQSDDEEELKLQHLVVPRN--YLAANWPVLHVAANEDGSYLAIAGRRGLTLYNIRAKRWRVFGDIAQEKQVACVGLLWLGR--IVVACLHREATNSFELCLYPRYHLDESSLLC---RLPLPDRPIAM 560
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A388LK90_CHABU (RIC1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LK90_CHABU) HSP 1 Score: 83.6 bits (205), Expect = 4.410e-16 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 7 DRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHG-FILLLFSRKHLSSDALM 351
DRV L+ S + V+P Y++SN P+ HV+ + G+Y+A+AG RG +Y+ T RWR+FG+I QER V+ AG+ W G ++ + +G F L + R HL +L+
Sbjct: 466 DRVLLIKSDEKDELTMQHLVIP--HAYMASNWPVFHVAPNDDGSYLAIAGRRGIILYNLRTKRWRVFGDISQERRVRCAGILWMGSMVVICNDKESNGGFELNFYPRYHLDDSSLL 579
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A176WQE0_MARPO (RIC1 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WQE0_MARPO) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-15 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKH-GFILLLFSRKHLSSDALM 351
G DRV LV S + VLP+ Y+ N P+ HV+ + GTY+A+AG RG +Y +WR+FG++ QER+VQ G+ W G+ +V R + L L+ R HL +L+
Sbjct: 400 GEDRVLLVQSDEEDQLKIQHLVLPL--SYIGVNWPVLHVAANEDGTYLAIAGRRGVILYDMQLKKWRVFGDVTQERQVQCVGLLWVGKIVVVCNYRESSKSYELSLYPRYHLDETSLL 515
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A1Q3DCI7_CEPFO (RIC1 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3DCI7_CEPFO) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-15 Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRH---KHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFM 396
G DR+ +V S+ LL LPV Y+S N P++HVS S+ G Y+AVAG G +Y +WR+FG++ QE+++Q G+ W G+ +VV + + + LL + R HL +L+ R P+ +P+ M
Sbjct: 425 GEDRLLVVQSEDTDELKLLHLNLPV--SYISQNWPVQHVSASKDGMYLAVAGLHGLILYDIRLKKWRVFGDVSQEQKIQCKGLLWLGK--IVVVCNYIDSSNTYELLFYPRYHLDQSSLLC---RKPLLAKPMVM 552
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A7S0BSW3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSW3_9RHOD) HSP 1 Score: 80.9 bits (198), Expect = 3.680e-15 Identity = 40/120 (33.33%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLL-WRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRHKHG--FILLLFSRKHLSSDALM 351
GSD++ ++ + + L W+ +P H Y+ SN P++ V+ + T++AVAG RGFAV+ + RWRLFG+++QER +Q + W G+ +V + + +LLF R L +++
Sbjct: 63 GSDKLMMLGLNEDAVEELFEWQDIPFHKDYIQSNWPVQLVAVNSDLTFVAVAGQRGFAVFHLRSGRWRLFGDVKQERSIQCCALAWVGKLVVVCCEEEERPGEYEMLLFRRDFLDEASIV 182
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A022QXT0_ERYGU (RIC1 domain-containing protein n=3 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QXT0_ERYGU) HSP 1 Score: 80.9 bits (198), Expect = 3.790e-15 Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRH---KHGFILLLFSRKHLSSDALM 351
G DR+ +V S+ +L LPV Y+S N P+ HV+ SR G Y+AVAG G +Y RWR+FG++ QE+++Q G+ W G+ +VV + + + LL + R HL +L+
Sbjct: 397 GEDRLLIVQSEDTDELKILHLNLPV--SYISQNWPVLHVAASRDGMYLAVAGRHGLILYDIRLKRWRVFGDVTQEQQIQCQGLLWLGK--IVVVCNYVDSSNTYELLFYPRYHLDQSSLL 512
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: UPI000C1CCCA5 (RAB6A-GEF complex partner protein 1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCCA5) HSP 1 Score: 80.5 bits (197), Expect = 5.160e-15 Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRH---KHGFILLLFSRKHLSSDALM 351
G DR+ LV S+ +L LPV Y+S N P+ HV+ S+ G Y+AVAG G +Y RWR+FG++ QE+++Q G+ W G+ +VV + + + LL + R HL ++L+
Sbjct: 364 GEDRLLLVQSEDTDELKILHLNLPV--SYISQNWPVLHVAASKDGMYLAVAGLHGLILYDIRLKRWRVFGDVTQEQQIQCRGLLWLGK--IVVVCNYIDSSNTYELLFYPRYHLDQNSLL 479
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Match: A0A5A7RBJ7_STRAF (Quinoprotein amine dehydrogenase n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A5A7RBJ7_STRAF) HSP 1 Score: 80.5 bits (197), Expect = 5.180e-15 Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 1
Query: 1 GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVAGSRGFAVYSRPTNRWRLFGNIEQEREVQVAGMCWWGESALVVASRH---KHGFILLLFSRKHLSSDALMIPPIRLPVGMRPLFM 396
G DR+ +V ++ +L LPV Y+S N P+ HV+ SR G Y+AVAG G +Y RWR+FG++ QE+++Q G+ W G+ +VV + + + LL + R HL +L+ R P+ +P+ M
Sbjct: 425 GEDRLLIVHAEDTDELKILHLNLPV--SYISQNWPVLHVAASRDGMYLAVAGLHGLILYDIRLKRWRVFGDVTQEQQIQCRGLLWLGK--IVVICNYVDSSNAYELLFYPRYHLDQSSLLC---RKPLLAQPMVM 552 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13924.3065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13924.3065.1 >prot_Ecto-sp13_S_contig13924.3065.1 ID=prot_Ecto-sp13_S_contig13924.3065.1|Name=mRNA_Ecto-sp13_S_contig13924.3065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp GSDRVALVDSQPWSAQVLLWRVLPVHPGYLSSNAPLRHVSTSRAGTYIAVback to top mRNA from alignment at Ecto-sp13_S_contig13924:535..1841- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13924.3065.1 ID=mRNA_Ecto-sp13_S_contig13924.3065.1|Name=mRNA_Ecto-sp13_S_contig13924.3065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1307bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13924:535..1841- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13924:535..1841- >mRNA_Ecto-sp13_S_contig13924.3065.1 ID=mRNA_Ecto-sp13_S_contig13924.3065.1|Name=mRNA_Ecto-sp13_S_contig13924.3065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13924:535..1841- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |