mRNA_Ecto-sp13_S_contig1386.3017.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: D8LC91_ECTSI (PRF3, plastid translation release factor RF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC91_ECTSI) HSP 1 Score: 794 bits (2050), Expect = 5.530e-286 Identity = 402/420 (95.71%), Postives = 404/420 (96.19%), Query Frame = 1
Query: 10 MNPLDGFGVGGRRAVTRRCIRPRSVLMLSCLVMTSHAFMAPGAQVRAPRQDSRCQSTSVELSEAEAEPGIEPLTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
MNPLDGFGVGGRRAV RRCIRPRSVLMLSCLVMTSH FMAPGAQVRAPRQ S CQSTSVELSEAEAEPG LAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGE+FKGVLDRDT TVHLFERAGRTKKATDMPELDLHDP LPELITEELHEQLLEDVEMLDELVEPLDMERVL GEQSPMFFGSAMTNFGVELFLKRFLTIGQKP+SRRMGNADVILP YNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK
Sbjct: 1 MNPLDGFGVGGRRAVARRCIRPRSVLMLSCLVMTSHGFMAPGAQVRAPRQGSPCQSTSVELSEAEAEPGTXXXXXXXLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTKTVHLFERAGRTKKATDMPELDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLTGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPSSRRMGNADVILPGYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 420
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A6H5KH59_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH59_9PHAE) HSP 1 Score: 622 bits (1605), Expect = 3.510e-221 Identity = 315/323 (97.52%), Postives = 317/323 (98.14%), Query Frame = 1
Query: 163 SRCQSTSVELSEAEAEPGIEPLTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG 1131
SRCQSTSVELSEAEA PG EP TEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEY GNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGE+FKGVLDRDTNTVHLFERA RTKKATDMPE+DLHDP LPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG
Sbjct: 8 SRCQSTSVELSEAEAGPGTEPKTEPKLAPVAPTTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYAGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEEFKGVLDRDTNTVHLFERAARTKKATDMPEIDLHDPKLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG 330
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A836C6V6_9STRA (PRF3, plastid translation release factor RF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V6_9STRA) HSP 1 Score: 523 bits (1347), Expect = 1.690e-179 Identity = 269/336 (80.06%), Postives = 292/336 (86.90%), Query Frame = 1
Query: 274 GGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRM---GNA-DVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
G QWAA EI RRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSR+DQRKATSDWMELEKQRGISITSTVLSFEY G INLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVC+LR LPIFTF NKLDRPSLSPFELLDQIE +FG++M PVLWPIGDG +F+GVLDRDTN VHLFER RT +A +M L+L DP LP I E L+ QL EDVE+L+ L+EPLDM +V GEQSPMFFGSAM NFGVELFLKRFLT+GQ PA R + GNA + + P+Y EFTGF FKLQANLDPRHRDRLAY+RVVSGR+EKGM+
Sbjct: 69 GAQWAAPAAEIARRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRADQRKATSDWMELEKQRGISITSTVLSFEYAGAQINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCRLRGLPIFTFCNKLDRPSLSPFELLDQIEGDFGLQMVPVLWPIGDGPNFQGVLDRDTNLVHLFERGDRTGRAKEMGTLELDDPELPIAIGETLYNQLREDVEVLEGLIEPLDMAKVHAGEQSPMFFGSAMVNFGVELFLKRFLTLGQGPAPRSISSGGNAAEQLTPEYPEFTGFCFKLQANLDPRHRDRLAYIRVVSGRFEKGMR 404
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A6S9HEF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HEF4_HETAK) HSP 1 Score: 481 bits (1237), Expect = 4.250e-163 Identity = 244/330 (73.94%), Postives = 286/330 (86.67%), Query Frame = 1
Query: 283 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELI-TEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
+AA E+ RRRNFAIISHPDAGKTT+TEKLLLYGGAIQ+AGAV++R+ QRKATSDWMELEKQRGISITSTVLSFEYDG+ INLLDTPGHQDFSEDTYRTLAAADN+VMLVDAAKGLEPQT+KLFEVC+LR LPIFTF NK+DRP+LSPF+L+DQIE EFG++M PV+WPIG+G+ FKGVL+RD+ ++LFE+ R KKA + + L DP L ++ ++L +QL+EDVEMLD L EPLDM RVL GEQSPMFFGSAMTNFGVE+FL+RFLT+GQ P +R A + P + EFTGFVFKLQANLDP+HRDRLAYVRV SG++EKGMK
Sbjct: 61 YAAPEKEVIRRRNFAIISHPDAGKTTMTEKLLLYGGAIQDAGAVKTRASQRKATSDWMELEKQRGISITSTVLSFEYDGHAINLLDTPGHQDFSEDTYRTLAAADNSVMLVDAAKGLEPQTKKLFEVCRLRGLPIFTFCNKMDRPALSPFDLVDQIEGEFGLQMCPVVWPIGNGDRFKGVLERDSGLIYLFEKGQRGKKAEETT-VRLDDPGLRGILGDDQLFDQLMEDVEMLDGLFEPLDMARVLAGEQSPMFFGSAMTNFGVEVFLRRFLTLGQAPPARTTA-AGPLAPTHPEFTGFVFKLQANLDPKHRDRLAYVRVCSGKFEKGMK 388
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A7S2WHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHP1_9STRA) HSP 1 Score: 471 bits (1213), Expect = 6.010e-160 Identity = 250/363 (68.87%), Postives = 286/363 (78.79%), Query Frame = 1
Query: 199 AEAEPGIEPLTEPKLAPVAPTTTSKGGQ--WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGN----HINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
AEA PG E K AP GG + A EI+RRRN AII+HPDAGKTTLTEKLLLYGGA+Q+AGAVR+R++QR ATSDWMELE+QRGISITSTVLSFEY+ H+NLLDTPGHQDFSEDTYRTLAA DNAVMLVDAAKGLEPQTRKL EVC+L LPIFTF NK+DRP+LSP EL+DQIE EFG+ PV+WPIGDG +F+GVLDR V+LFER RT KA D + L DP+L ELI E L+ QL+EDVE+LD L+EPLDM+RV G+QSPMFFGSAM NFGVELFLK+FL +G P + V+ DY EFTGFVFKLQANLDP+HRDRLAY+R+VSGR+EKGMK
Sbjct: 56 AEAPPGTEAK---KGAPAG------GGSSLFLAPRTEIERRRNLAIIAHPDAGKTTLTEKLLLYGGALQQAGAVRTRANQRAATSDWMELEQQRGISITSTVLSFEYEHGDRQLHVNLLDTPGHQDFSEDTYRTLAACDNAVMLVDAAKGLEPQTRKLLEVCRLSGLPIFTFCNKMDRPALSPLELIDQIEGEFGLNCHPVVWPIGDGPEFQGVLDRQEGLVYLFERGDRTGKAKDKATVSLDDPDLEELIGERLYSQLMEDVEVLDGLMEPLDMDRVRDGDQSPMFFGSAMNNFGVELFLKKFLDMGTTPQPMEVPGG-VLTADYGEFTGFVFKLQANLDPKHRDRLAYIRIVSGRFEKGMK 408
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A7S2FZH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZH2_9STRA) HSP 1 Score: 446 bits (1148), Expect = 1.720e-149 Identity = 229/338 (67.75%), Postives = 272/338 (80.47%), Query Frame = 1
Query: 301 EIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPN-LPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMG--------NADVILP------DYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
EI+RRRN AII+HPDAGKTTLTEKLLLYGGA+Q+AGAVR+R+DQR ATSDWMELEKQRGISITSTVLSF+Y G HINLLDTPGHQDFSEDTYRTLAA+DNAV L+DAAKGLEPQTRKL EV KL +P+FTF NK+DRP+LSPFEL+DQIE +F + PV+WPIG GE+F+G+L+R+T TVHLFE+ RT KA DM + L D L +L+ +++ QLLED EMLD L+EPLD++ V+ G Q+PMFFGSAM NFGVELFL+ FL G +P R + DVI+ D +EF+ FVFKLQAN+DP+HRDRLAY+RVVSGRY KGMK
Sbjct: 63 EIERRRNLAIIAHPDAGKTTLTEKLLLYGGAVQQAGAVRTRADQRAATSDWMELEKQRGISITSTVLSFDYLGKHINLLDTPGHQDFSEDTYRTLAASDNAVTLIDAAKGLEPQTRKLLEVTKLSGIPVFTFCNKMDRPALSPFELIDQIEADFKLTCVPVVWPIGMGEEFRGLLERETKTVHLFEKGIRTGKAVDMATVPLDDAETLEDLLGADVYAQLLEDAEMLDGLIEPLDLDEVMDGNQTPMFFGSAMNNFGVELFLRFFLQWGSRPQKRLISPPXXXPKATDDVIVEEEFIEADDSEFSAFVFKLQANIDPKHRDRLAYLRVVSGRYNKGMK 400
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: A0A1Z5KM76_FISSO (Peptide chain release factor 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM76_FISSO) HSP 1 Score: 445 bits (1144), Expect = 3.250e-149 Identity = 215/338 (63.61%), Postives = 276/338 (81.66%), Query Frame = 1
Query: 259 TTTSKGGQWAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITE-ELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
++ S + A EI +RRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +++QR SD++ +E++RGISI+STVL+F+Y I LLDTPGHQDFSEDTYR LAA D A+ML+DAAKGLEPQTRKLFEVC+LR +P+FTFVNK+DRP+LSP++++DQIE+EFG++ P+LWPIGDG+ FKGVLDR TNTVHL+++A + + E+ L D L +LI + EL+++L+ED E+L+E++ PLDMERV+IG+QSP+FFGSAMTNFGV+LFL F +G +P R +I PDY EFTGFVFK QANLDP+HRDRLAYVR+VSG+YEKGMK
Sbjct: 40 SSESSSSTYQAPLSEITKRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRHKAEQRATQSDFLAMEQERGISISSTVLNFDYQDYTIRLLDTPGHQDFSEDTYRALAATDQALMLMDAAKGLEPQTRKLFEVCQLRSIPLFTFVNKMDRPALSPYDIMDQIEQEFGLEPHPILWPIGDGDRFKGVLDRTTNTVHLYQKAEKRGAKAEATEVALDDEQLKDLIGDSELYDKLMEDAELLNEMIPPLDMERVMIGKQSPLFFGSAMTNFGVQLFLDHFCRMGTEPLGRETSKDILITPDYGEFTGFVFKTQANLDPKHRDRLAYVRIVSGKYEKGMK 377
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: B7G1B1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1B1_PHATC) HSP 1 Score: 441 bits (1133), Expect = 6.600e-147 Identity = 220/336 (65.48%), Postives = 272/336 (80.95%), Query Frame = 1
Query: 283 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDP-NLPELIT-EELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRM-----GNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
+ A EIDRRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR +++QR SD+ME+E++RGISI+STV++FEY I L+DTPGHQDFSEDTYR LAAADNA+ML+DAAKGLEPQTRKLFEVC++R LP+FTF NK+DRP+LSP+E++DQIE EFG++ P+LWPIGDG+ FKGVLDR TN VHL+++A + + E+ L D L I EEL +LLED E+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F ++G KP R ++I P++ EFTGF+FK QANLDP+HRDRLAYVRVVSGRYEKGMK
Sbjct: 87 YQAPQIEIDRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRQKAEQRATQSDFMEMEQERGISISSTVMNFEYQDFGIRLMDTPGHQDFSEDTYRALAAADNALMLLDAAKGLEPQTRKLFEVCRMRRLPLFTFCNKMDRPALSPYEIMDQIEDEFGLETHPILWPIGDGDRFKGVLDRTTNVVHLYQKAEKRGGKAGVQEVPLEDTVTLKATIDDEELFHKLLEDAELLEELINPLDMERVMKGEQSPLFFGSAMTNFGVQLFLDKFCSMGTKPMGRMADTKSENEEEMIGPNHEEFTGFIFKTQANLDPKHRDRLAYVRVVSGRYEKGMK 422
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: B5YM78_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YM78_THAPS) HSP 1 Score: 439 bits (1129), Expect = 1.520e-146 Identity = 223/355 (62.82%), Postives = 278/355 (78.31%), Query Frame = 1
Query: 283 WAATPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKA----TDMPELDLHDPNLPELITE-ELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNAD---------------------VILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
++A EI+RRRN AIISHPD+GKTT+TEKLLLYGGA+Q+AGAVR + +QR SD+ME+E+QRGISI++TV+SF+Y+ HIN+LDTPGHQDFSEDTYR LAAADNAVML+DAAKGLEPQTRKLFEVC++R+LP+FTFVNK+DRP+L+P+E++DQIE EFG++ P+LWPIGDGE FKGVLDR N VHLF+RA R K+ M +LD L E I + EL ++LLED E+L+EL+ PLDMERV+ GEQSP+FFGSAMTNFGV+LFL +F +G KP+ R D +I P+Y +FTGFVFK QANLDP+HRDRLAY+R+VSG ++KGMK
Sbjct: 55 YSAPLTEINRRRNLAIISHPDSGKTTMTEKLLLYGGALQQAGAVRMKGEQRGTQSDFMEMERQRGISISATVMSFDYNALHINILDTPGHQDFSEDTYRALAAADNAVMLLDAAKGLEPQTRKLFEVCRMRQLPLFTFVNKMDRPALTPYEIMDQIEAEFGLETHPILWPIGDGERFKGVLDRLENMVHLFDRAERGSKSEVRQVSMSDLD----TLKECINDDELFDKLLEDQELLEELINPLDMERVIAGEQSPLFFGSAMTNFGVQLFLDKFCAMGTKPSGRLAKRMDEVKGKKAKEAASSIDDDEGDELIGPEYEDFTGFVFKTQANLDPKHRDRLAYIRIVSGSFQKGMK 405
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Match: W7TN94_9STRA (Peptide chain release factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN94_9STRA) HSP 1 Score: 441 bits (1133), Expect = 3.060e-146 Identity = 221/326 (67.79%), Postives = 265/326 (81.29%), Query Frame = 1
Query: 292 TPFEIDRRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVRSRSDQRKATSDWMELEKQRGISITSTVLSFEYDGNHINLLDTPGHQDFSEDTYRTLAAADNAVMLVDAAKGLEPQTRKLFEVCKLRELPIFTFVNKLDRPSLSPFELLDQIEREFGMKMAPVLWPIGDGEDFKGVLDRDTNTVHLFERAGRTKKATDMPELDLHDPNLPELITEELHEQLLEDVEMLDELVEPLDMERVLIGEQSPMFFGSAMTNFGVELFLKRFLTIGQKPASRRMGNADVILPDYNEFTGFVFKLQANLDPRHRDRLAYVRVVSGRYEKGMK 1269
T ++ RR FAIISHPD+GKTTLTEKLLLYGGAI EAGAVRSR+ QRK SD+ME+EKQRGISI+STVL+F+Y G INLLDTPGH DF EDTYRTL+AADNA+MLVDA KGLE QTRKLFEVC+LR LPI+TFVNK+DRP+ P EL+D+IERE G+++ P++WPIGDGEDFKGV DR+ VHLFER GR +KA + L L DP LP+L+ L QL EDVE+LD L+ LD+ +V+ GEQ+PMFFGSAM+NFGV LFL +FL I + PA R A I P++ EFTGFVFKLQANL+P+HRDR+AYVR+ SG++EKGMK
Sbjct: 150 TKSKVLERRTFAIISHPDSGKTTLTEKLLLYGGAINEAGAVRSRASQRKTQSDFMEMEKQRGISISSTVLTFDYSGFQINLLDTPGHADFGEDTYRTLSAADNALMLVDAGKGLEAQTRKLFEVCRLRGLPIYTFVNKMDRPAKGPVELVDEIEREMGLEVVPMVWPIGDGEDFKGVYDREARVVHLFERQGRKEKAAALDALPLSDPGLPKLLGSTLFAQLEEDVELLDALMPSLDVAKVMRGEQTPMFFGSAMSNFGVALFLNKFLAISEPPAPRET-TAGSIGPEHPEFTGFVFKLQANLNPKHRDRVAYVRICSGKFEKGMK 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1386.3017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1386.3017.1 >prot_Ecto-sp13_S_contig1386.3017.1 ID=prot_Ecto-sp13_S_contig1386.3017.1|Name=mRNA_Ecto-sp13_S_contig1386.3017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp MNPLDGFGVGGRRAVTRRCIRPRSVLMLSCLVMTSHAFMAPGAQVRAPRQback to top mRNA from alignment at Ecto-sp13_S_contig1386:9835..14253+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1386.3017.1 ID=mRNA_Ecto-sp13_S_contig1386.3017.1|Name=mRNA_Ecto-sp13_S_contig1386.3017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4419bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1386:9835..14253+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1386:9835..14253+ >mRNA_Ecto-sp13_S_contig1386.3017.1 ID=mRNA_Ecto-sp13_S_contig1386.3017.1|Name=mRNA_Ecto-sp13_S_contig1386.3017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1386:9835..14253+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |