mRNA_Ecto-sp13_S_contig13841.3004.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: D7FS17_ECTSI (PNP_UDP_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS17_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 6.030e-166 Identity = 283/309 (91.59%), Postives = 287/309 (92.88%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 927
+H+ L VANNIVTVGSEGRGEILASLLDGT XXXXXXXXXXXXXXXXXXXXXXXX RSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTA RGE QGEPYLFHG+APADEELSEALLKELKRSLDG+AG SDGGGGTAVVGCLNAS DSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAA IVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD
Sbjct: 23 LHLELRSGEVANNIVTVGSEGRGEILASLLDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTAARGETQGEPYLFHGVAPADEELSEALLKELKRSLDGKAGGSDGGGGTAVVGCLNASADSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAATIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 331
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S1RXB5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RXB5_ALECA) HSP 1 Score: 194 bits (494), Expect = 5.980e-54 Identity = 124/307 (40.39%), Postives = 175/307 (57.00%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQG--EPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKS-KVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
+H+ L ++ I+ VG R ++LA LL+ T G+ S RGF+T+TG + G VS+V I MG MDFFVRE RA GP+ +VRLG+ GL+ +PVGSVAVA+ GS+++++N A+ G GE PYL PAD ELS A+L+E+++SL G G AV G LN + DSFYSSQGRLDP F D N ++ ++ +HP A + EMETFQLLHLA+ C+ + ++ +AA +V+ANR + +A + ++ ER GEA LRA+
Sbjct: 39 LHLGLADGELSGRILAVGHPARADLLAKLLE---PEETGGS------------------------LFRLASDRGFLTYTGLFKGERVSVVAIGMGLSMMDFFVREARAAVRGPMAVVRLGTSGGLKASVPVGSVAVATGGSILVQRNYGAFAG----GEVHNGDSPYLISSPCPADTELSTAVLREVQQSL---------GEGMAVGG-LNVTADSFYSSQGRLDPCFADCNRSLVDDVVRQHPEAVTMEMETFQLLHLAKCCKPAGSLRGAAAVVVVANRPTGEVVAEEGLTSAERKGGEAILRAL 304
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A2P6NE40_9EUKA (PNP_UDP_1 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NE40_9EUKA) HSP 1 Score: 187 bits (475), Expect = 3.930e-51 Identity = 112/292 (38.36%), Postives = 161/292 (55.14%), Query Frame = 1
Query: 28 VANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAAL 903
VAN I++VG R ++ASL D + + S RGF HTGT+N VPV+++ MG+P MDF VRE RAV GP+ I+R G+C + +P+GSV VASEGS+ IR+NPDAWE + E + + Y+F + +D E+S+ L + +K+ + V L A+ DSFY+SQGR D SF+D N++++ +LE++ S + EMETF L LAR C K +++SAAAIVLA R ++ + RIE+ G A L
Sbjct: 50 VANRILSVGDHRRASVIASLFDNPSSNLVT------------------------------TSSRGFTVHTGTFNKVPVTVIATGMGFPMMDFLVRECRAVVEGPMVIMRFGTCGTPQTHIPIGSVVVASEGSIFIRRNPDAWEQDGSWDEKESK-YIFSKVVRSDPEISKRLAENMKKMV----------ADCQVYEGLGATADSFYASQGRTDDSFDDDNANLIDQMLEKYSSISALEMETFHLFDLAR-CSKGTIRSSAAAIVLAQRRSNAFLDKATTERIEKEGGRAVL 299
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S2HMB2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMB2_9STRA) HSP 1 Score: 185 bits (469), Expect = 5.230e-51 Identity = 109/236 (46.19%), Postives = 144/236 (61.02%), Query Frame = 1
Query: 211 SKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTS 918
S RGF T TGT GVP+SI+ I MG+P MDFFVREVRA+ GP+ +VR G+C GL+ D P GSV V SEG+V + ++PDA++ + Y AP+D LS A+ +EL +L E V +NAS DSFYSSQGR D F+D ILS L R+P+ S EMETF LL LAR C K+ ++A+AA+IV+ANR + +SR+E G A ++A+ S
Sbjct: 31 SSRGFTTFTGTLGGVPMSIISIGMGFPMMDFFVREVRAIVEGPMCVVRFGTCGGLKEDAPEGSVVVVSEGAVAVLRDPDAFQEEGNTQYYRISKYP----APSDPGLSGAVARELSSALGAEV----------VKLGMNASGDSFYSSQGRFDTQFDDNAHGILSELRSRYPAVASMEMETFHLLDLARCC-KTSIKATAASIVVANRSTGGVVDGPTLSRLESVGGGAVMKALAS 251
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S2SVQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVQ5_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.320e-50 Identity = 116/304 (38.16%), Postives = 165/304 (54.28%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
+H+ + P+ VA IVTVG+ R +LA DG P S RGF T+TGT +GVP+S++ I MG P MDF +RE+R++ GP+ +VR G+C GL+ +P G+V VA+ GSV + +NPD++ A+ G PY G+APAD LS A+ EL +L E G + +N + DSFY SQ R DP+F+DR +L SLL R+P + EMETFQL LAR + ++A+AAAIV+ANR + + +E G+A ++AV
Sbjct: 56 LHVDVGPQEVAPRIVTVGAASRARLLAGHFDGVNGQDPQRVP----------------------GVLYHESSRGFTTYTGTVDGVPLSVIAIGMGMPMMDFMIREIRSIVEGPMIMVRYGTCGGLQEQVPEGTVVVAALGSVSVTRNPDSFA-PASIGLPSPSPYNISGVAPADVLLSNAVGAELSSTLKREVG-------VQTMFGMNVTADSFYGSQARKDPNFDDRGDGLLESLLSRYPGLMTMEMETFQLFDLARSATQP-IKAAAAAIVVANRPTGAIMDGITLKSVESLGGKAIMKAV 328
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A4D9CWQ0_9STRA (PNP_UDP_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ0_9STRA) HSP 1 Score: 185 bits (470), Expect = 3.050e-50 Identity = 134/327 (40.98%), Postives = 169/327 (51.68%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAW------EGT--------ATRGEAQGEP-YLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 927
+H+ L +A+ I++VG GR ++A LD ++ HT S RGF T+TGT+ VSI+ I MG P MDF VRE R + + PL I R G+C L PD+ VGSV VAS GSV + +NPDA+ GT AT G P YL AD L++ALL ELK L E V +N S SFYSSQGR D F+DRN D+L L ERHPS S EME+FQLL LAR R S V+A+AA+IV+ANR D R++ +ER GEA +RA+ F D
Sbjct: 46 LHLGLKEGQIASRILSVGCPGRAALIAKALDKSSPIFSHT---------------------------------SPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTSSGTSADEINPIATGGAPHVRPPYLVFAPQLADPILTQALLGELKEQLGSEH----------VRRGMNVSACSFYSSQGRRDVFFDDRNEDLLDMLRERHPSLASMEMESFQLLALARASRGS-VRAAAASIVVANRPTGDVCDEARLAYLERTGGEAMVRALVRFED 328
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7R9Y8J0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y8J0_9VIRI) HSP 1 Score: 184 bits (468), Expect = 5.920e-50 Identity = 120/307 (39.09%), Postives = 163/307 (53.09%), Query Frame = 1
Query: 4 HICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVT 915
H+ VAN I++VG GR E L+++L+ +H S RGFVT+TG YN PVSI+ MG NMD VRE RAV G + +VRLG+C GL+PD PVG+V VAS+G+ +NPDA+ A G + Y F PAD E+S L++ L+ SLD T VV L+ + SFYSSQGR+D +F D N D+ L+ER+P A S EMETF LL L R C ++ +AAA+VLA R +++ I +R++ + AG A V+
Sbjct: 46 HLGFRRGDVANRIISVGDVGRAEFLSTMLEPAADGIVHKVM-------------------------------SSRGFVTYTGRYNDEPVSIIATLMGVANMDMVVREARAVIDGDMAVVRLGTCGGLQPDAPVGTVVVASKGAASCYRNPDAFGPDADAGVGK---YHFSKPVPADGEMSALLVENLRASLDDT---------TPVVEGLDVTACSFYSSQGRVDAAFIDHNEDLTERLVERYPDAMSLEMETFHLLDLCR-CSHGTIKGAAAALVLAARFSNEFIDSNRVAELMEGAGRAVFETVS 308
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S0AES0_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AES0_9DINO) HSP 1 Score: 183 bits (465), Expect = 1.990e-49 Identity = 118/311 (37.94%), Postives = 164/311 (52.73%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQ---GEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRK-SKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSF 921
+H+ L +A +V VG R E+LA L+ P+ S RGF+T TGTY G VSIV + MG MDFF RE RAV GP+ +VRLG+C L+ +PVGS+ VA+EGS+++++N A+ G+ E PYL +D LS A+L L+R L G G A+ G LN + DSFY SQGRLD F D N +++ +L RHP + EMETFQLLHLA+ CR ++A+AA +++ANR + ++ + + ER G A LRA+
Sbjct: 61 LHLGLADGELAARVVAVGHHARAELLAKFLE----------PEQPGGSVFRLA-----------------SDRGFLTFTGTYMGTRVSIVSVGMGLAMMDFFAREARAVVKGPMAVVRLGTCGCLKKSVPVGSICVATEGSILVQRNISAFAGSREPKEEDLNGDHPYLISEPCLSDRVLSAAVLDSLQRDL---------GAGMALGG-LNVTADSFYGSQGRLDHRFVDANRGLIAEVLRRHPGVVTMEMETFQLLHLAQSCRPMGDMRAAAAVVIVANRSTGEVVSEEALKAAERNGGSAILRALVGL 334
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S3BCG4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BCG4_9VIRI) HSP 1 Score: 182 bits (462), Expect = 7.740e-49 Identity = 119/309 (38.51%), Postives = 164/309 (53.07%), Query Frame = 1
Query: 4 HICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSF 921
H+ VAN I++VG GR E LAS+L+ +H S RGFVTHTG Y G PVS++ MG NMD VRE RAV G + IVR+G+C GL+P PVG++ +AS+G+ +NPDA+ A E E + F PAD+ LS AL +++ + GE T+VV +N + SFYSSQGR D +F+DRN D+ L+E +P A S EMETF LL + R R S ++ SAAA+VLA R +++ I +++ + AG AA V +
Sbjct: 67 HLQFRRGDVANRIISVGDVGRAEFLASMLEPALDGRVHKVV-------------------------------SSRGFVTHTGRYGGQPVSVIATLMGVSNMDMVVREARAVVDGEMVIVRVGTCGGLQPAAPVGTIVIASKGAASCYRNPDAFADDADSSE---ELFRFSKPIPADDALSTALAANMRKHV-GET--------TSVVEGMNVTACSFYSSQGRSDAAFDDRNDDLTDVLVEHYPEAMSLEMETFHLLDMCRASRGS-IRGSAAALVLAARFSNEFIDSSQVAEVMEKAGRAAFETVAAI 331
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: W2PHG5_PHYPN (PNP_UDP_1 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PHG5_PHYPN) HSP 1 Score: 179 bits (454), Expect = 2.460e-48 Identity = 120/306 (39.22%), Postives = 159/306 (51.96%), Query Frame = 1
Query: 1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTA--VVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
+H+ + VAN +V+VGS GR +LA LLD T S RGF T TG GV VSIV MG PNMDF VRE RAV GP+ I+R G+C +R ++ GSV V+ +GSVM+ +NPDA+ AT + Y + P+ LS AL+ + L GG V LNA+ SFYSSQGRLD SF+DRN ++ +L + H + EMETF LL LA+ R S VQA+AA +V+ANR++ IA D + R+E G+ L +
Sbjct: 18 LHLGVKAGQVANRVVSVGSIGRARLLAELLDDGQFETI-------------------------------ESARGFTTFTGKMKGVQVSIVATGMGVPNMDFVVRETRAVVEGPMNIIRFGTCGAVREEVTPGSVVVSGKGSVMVTRNPDAFFPDATGDDY----YRVSRVMPSSPALSNALVAAMNDKLSALPAEPTIGGNDVLNVFDGLNATACSFYSSQGRLDSSFDDRNEQLVENLTKTHQDLYTVEMETFHLLDLAQRSRGS-VQATAAVLVVANRLSGQVIASDLLKRLESLWGQVILGVI 287 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13841.3004.1 >prot_Ecto-sp13_S_contig13841.3004.1 ID=prot_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp MHTTAGTPKDDDNNNINDHDNNTKNSSSSSTSTTRRSKRGFVTHTGTYNGback to top mRNA from alignment at Ecto-sp13_S_contig13841:899..3115+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13841.3004.1 ID=mRNA_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2217bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13841:899..3115+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13841:899..3115+ >mRNA_Ecto-sp13_S_contig13841.3004.1 ID=mRNA_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13841:899..3115+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |