mRNA_Ecto-sp13_S_contig13841.3004.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13841.3004.1
Unique NamemRNA_Ecto-sp13_S_contig13841.3004.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: D7FS17_ECTSI (PNP_UDP_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS17_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 6.030e-166
Identity = 283/309 (91.59%), Postives = 287/309 (92.88%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 927
            +H+ L    VANNIVTVGSEGRGEILASLLDGT           XXXXXXXXXXXXXXXXXXXXXXXX RSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTA RGE QGEPYLFHG+APADEELSEALLKELKRSLDG+AG SDGGGGTAVVGCLNAS DSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAA IVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD
Sbjct:   23 LHLELRSGEVANNIVTVGSEGRGEILASLLDGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTAARGETQGEPYLFHGVAPADEELSEALLKELKRSLDGKAGGSDGGGGTAVVGCLNASADSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAATIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 331          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S1RXB5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RXB5_ALECA)

HSP 1 Score: 194 bits (494), Expect = 5.980e-54
Identity = 124/307 (40.39%), Postives = 175/307 (57.00%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQG--EPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKS-KVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
            +H+ L    ++  I+ VG   R ++LA LL+      T G+                             S RGF+T+TG + G  VS+V I MG   MDFFVRE RA   GP+ +VRLG+  GL+  +PVGSVAVA+ GS+++++N  A+ G    GE      PYL     PAD ELS A+L+E+++SL         G G AV G LN + DSFYSSQGRLDP F D N  ++  ++ +HP A + EMETFQLLHLA+ C+ +  ++ +AA +V+ANR   + +A + ++  ER  GEA LRA+
Sbjct:   39 LHLGLADGELSGRILAVGHPARADLLAKLLE---PEETGGS------------------------LFRLASDRGFLTYTGLFKGERVSVVAIGMGLSMMDFFVREARAAVRGPMAVVRLGTSGGLKASVPVGSVAVATGGSILVQRNYGAFAG----GEVHNGDSPYLISSPCPADTELSTAVLREVQQSL---------GEGMAVGG-LNVTADSFYSSQGRLDPCFADCNRSLVDDVVRQHPEAVTMEMETFQLLHLAKCCKPAGSLRGAAAVVVVANRPTGEVVAEEGLTSAERKGGEAILRAL 304          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A2P6NE40_9EUKA (PNP_UDP_1 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NE40_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 3.930e-51
Identity = 112/292 (38.36%), Postives = 161/292 (55.14%), Query Frame = 1
Query:   28 VANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAAL 903
            VAN I++VG   R  ++ASL D  + +                                  S RGF  HTGT+N VPV+++   MG+P MDF VRE RAV  GP+ I+R G+C   +  +P+GSV VASEGS+ IR+NPDAWE   +  E + + Y+F  +  +D E+S+ L + +K+ +              V   L A+ DSFY+SQGR D SF+D N++++  +LE++ S  + EMETF L  LAR C K  +++SAAAIVLA R ++  +      RIE+  G A L
Sbjct:   50 VANRILSVGDHRRASVIASLFDNPSSNLVT------------------------------TSSRGFTVHTGTFNKVPVTVIATGMGFPMMDFLVRECRAVVEGPMVIMRFGTCGTPQTHIPIGSVVVASEGSIFIRRNPDAWEQDGSWDEKESK-YIFSKVVRSDPEISKRLAENMKKMV----------ADCQVYEGLGATADSFYASQGRTDDSFDDDNANLIDQMLEKYSSISALEMETFHLFDLAR-CSKGTIRSSAAAIVLAQRRSNAFLDKATTERIEKEGGRAVL 299          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S2HMB2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMB2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.230e-51
Identity = 109/236 (46.19%), Postives = 144/236 (61.02%), Query Frame = 1
Query:  211 SKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTS 918
            S RGF T TGT  GVP+SI+ I MG+P MDFFVREVRA+  GP+ +VR G+C GL+ D P GSV V SEG+V + ++PDA++        +   Y     AP+D  LS A+ +EL  +L  E           V   +NAS DSFYSSQGR D  F+D    ILS L  R+P+  S EMETF LL LAR C K+ ++A+AA+IV+ANR     +    +SR+E   G A ++A+ S
Sbjct:   31 SSRGFTTFTGTLGGVPMSIISIGMGFPMMDFFVREVRAIVEGPMCVVRFGTCGGLKEDAPEGSVVVVSEGAVAVLRDPDAFQEEGNTQYYRISKYP----APSDPGLSGAVARELSSALGAEV----------VKLGMNASGDSFYSSQGRFDTQFDDNAHGILSELRSRYPAVASMEMETFHLLDLARCC-KTSIKATAASIVVANRSTGGVVDGPTLSRLESVGGGAVMKALAS 251          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S2SVQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVQ5_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.320e-50
Identity = 116/304 (38.16%), Postives = 165/304 (54.28%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
            +H+ + P+ VA  IVTVG+  R  +LA   DG         P                            S RGF T+TGT +GVP+S++ I MG P MDF +RE+R++  GP+ +VR G+C GL+  +P G+V VA+ GSV + +NPD++   A+ G     PY   G+APAD  LS A+  EL  +L  E G          +  +N + DSFY SQ R DP+F+DR   +L SLL R+P   + EMETFQL  LAR   +  ++A+AAAIV+ANR     +    +  +E   G+A ++AV
Sbjct:   56 LHVDVGPQEVAPRIVTVGAASRARLLAGHFDGVNGQDPQRVP----------------------GVLYHESSRGFTTYTGTVDGVPLSVIAIGMGMPMMDFMIREIRSIVEGPMIMVRYGTCGGLQEQVPEGTVVVAALGSVSVTRNPDSFA-PASIGLPSPSPYNISGVAPADVLLSNAVGAELSSTLKREVG-------VQTMFGMNVTADSFYGSQARKDPNFDDRGDGLLESLLSRYPGLMTMEMETFQLFDLARSATQP-IKAAAAAIVVANRPTGAIMDGITLKSVESLGGKAIMKAV 328          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A4D9CWQ0_9STRA (PNP_UDP_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWQ0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.050e-50
Identity = 134/327 (40.98%), Postives = 169/327 (51.68%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAW------EGT--------ATRGEAQGEP-YLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSFGD 927
            +H+ L    +A+ I++VG  GR  ++A  LD ++    HT                                 S RGF T+TGT+    VSI+ I MG P MDF VRE R + + PL I R G+C  L PD+ VGSV VAS GSV + +NPDA+       GT        AT G     P YL      AD  L++ALL ELK  L  E           V   +N S  SFYSSQGR D  F+DRN D+L  L ERHPS  S EME+FQLL LAR  R S V+A+AA+IV+ANR   D     R++ +ER  GEA +RA+  F D
Sbjct:   46 LHLGLKEGQIASRILSVGCPGRAALIAKALDKSSPIFSHT---------------------------------SPRGFTTYTGTFERTRVSIIAIGMGMPMMDFLVREARQLVSKPLLITRFGTCGALCPDVAVGSVVVASPGSVSVMRNPDAFLPLPTSSGTSADEINPIATGGAPHVRPPYLVFAPQLADPILTQALLGELKEQLGSEH----------VRRGMNVSACSFYSSQGRRDVFFDDRNEDLLDMLRERHPSLASMEMESFQLLALARASRGS-VRAAAASIVVANRPTGDVCDEARLAYLERTGGEAMVRALVRFED 328          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7R9Y8J0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y8J0_9VIRI)

HSP 1 Score: 184 bits (468), Expect = 5.920e-50
Identity = 120/307 (39.09%), Postives = 163/307 (53.09%), Query Frame = 1
Query:    4 HICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVT 915
            H+      VAN I++VG  GR E L+++L+      +H                                  S RGFVT+TG YN  PVSI+   MG  NMD  VRE RAV  G + +VRLG+C GL+PD PVG+V VAS+G+    +NPDA+   A  G  +   Y F    PAD E+S  L++ L+ SLD           T VV  L+ +  SFYSSQGR+D +F D N D+   L+ER+P A S EMETF LL L R C    ++ +AAA+VLA R +++ I  +R++ +   AG A    V+
Sbjct:   46 HLGFRRGDVANRIISVGDVGRAEFLSTMLEPAADGIVHKVM-------------------------------SSRGFVTYTGRYNDEPVSIIATLMGVANMDMVVREARAVIDGDMAVVRLGTCGGLQPDAPVGTVVVASKGAASCYRNPDAFGPDADAGVGK---YHFSKPVPADGEMSALLVENLRASLDDT---------TPVVEGLDVTACSFYSSQGRVDAAFIDHNEDLTERLVERYPDAMSLEMETFHLLDLCR-CSHGTIKGAAAALVLAARFSNEFIDSNRVAELMEGAGRAVFETVS 308          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S0AES0_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AES0_9DINO)

HSP 1 Score: 183 bits (465), Expect = 1.990e-49
Identity = 118/311 (37.94%), Postives = 164/311 (52.73%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQ---GEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRK-SKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSF 921
            +H+ L    +A  +V VG   R E+LA  L+          P+                           S RGF+T TGTY G  VSIV + MG   MDFF RE RAV  GP+ +VRLG+C  L+  +PVGS+ VA+EGS+++++N  A+ G+    E       PYL      +D  LS A+L  L+R L         G G A+ G LN + DSFY SQGRLD  F D N  +++ +L RHP   + EMETFQLLHLA+ CR    ++A+AA +++ANR   + ++ + +   ER  G A LRA+   
Sbjct:   61 LHLGLADGELAARVVAVGHHARAELLAKFLE----------PEQPGGSVFRLA-----------------SDRGFLTFTGTYMGTRVSIVSVGMGLAMMDFFAREARAVVKGPMAVVRLGTCGCLKKSVPVGSICVATEGSILVQRNISAFAGSREPKEEDLNGDHPYLISEPCLSDRVLSAAVLDSLQRDL---------GAGMALGG-LNVTADSFYGSQGRLDHRFVDANRGLIAEVLRRHPGVVTMEMETFQLLHLAQSCRPMGDMRAAAAVVIVANRSTGEVVSEEALKAAERNGGSAILRALVGL 334          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: A0A7S3BCG4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BCG4_9VIRI)

HSP 1 Score: 182 bits (462), Expect = 7.740e-49
Identity = 119/309 (38.51%), Postives = 164/309 (53.07%), Query Frame = 1
Query:    4 HICLHPRAVANNIVTVGSEGRGEILASLLDGTT---MHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAVTSF 921
            H+      VAN I++VG  GR E LAS+L+      +H                                  S RGFVTHTG Y G PVS++   MG  NMD  VRE RAV  G + IVR+G+C GL+P  PVG++ +AS+G+    +NPDA+   A   E   E + F    PAD+ LS AL   +++ + GE         T+VV  +N +  SFYSSQGR D +F+DRN D+   L+E +P A S EMETF LL + R  R S ++ SAAA+VLA R +++ I   +++ +   AG AA   V + 
Sbjct:   67 HLQFRRGDVANRIISVGDVGRAEFLASMLEPALDGRVHKVV-------------------------------SSRGFVTHTGRYGGQPVSVIATLMGVSNMDMVVREARAVVDGEMVIVRVGTCGGLQPAAPVGTIVIASKGAASCYRNPDAFADDADSSE---ELFRFSKPIPADDALSTALAANMRKHV-GET--------TSVVEGMNVTACSFYSSQGRSDAAFDDRNDDLTDVLVEHYPEAMSLEMETFHLLDMCRASRGS-IRGSAAALVLAARFSNEFIDSSQVAEVMEKAGRAAFETVAAI 331          
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Match: W2PHG5_PHYPN (PNP_UDP_1 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PHG5_PHYPN)

HSP 1 Score: 179 bits (454), Expect = 2.460e-48
Identity = 120/306 (39.22%), Postives = 159/306 (51.96%), Query Frame = 1
Query:    1 VHICLHPRAVANNIVTVGSEGRGEILASLLDGTTMHTTAGTPKDXXXXXXXXXXXXXXXXXXXXXXXXRRSKRGFVTHTGTYNGVPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSVAVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKELKRSLDGEAGSSDGGGGTA--VVGCLNASTDSFYSSQGRLDPSFEDRNSDILSSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAIAIDRISRIERAAGEAALRAV 912
            +H+ +    VAN +V+VGS GR  +LA LLD     T                                 S RGF T TG   GV VSIV   MG PNMDF VRE RAV  GP+ I+R G+C  +R ++  GSV V+ +GSVM+ +NPDA+   AT  +     Y    + P+   LS AL+  +   L         GG     V   LNA+  SFYSSQGRLD SF+DRN  ++ +L + H    + EMETF LL LA+  R S VQA+AA +V+ANR++   IA D + R+E   G+  L  +
Sbjct:   18 LHLGVKAGQVANRVVSVGSIGRARLLAELLDDGQFETI-------------------------------ESARGFTTFTGKMKGVQVSIVATGMGVPNMDFVVRETRAVVEGPMNIIRFGTCGAVREEVTPGSVVVSGKGSVMVTRNPDAFFPDATGDDY----YRVSRVMPSSPALSNALVAAMNDKLSALPAEPTIGGNDVLNVFDGLNATACSFYSSQGRLDSSFDDRNEQLVENLTKTHQDLYTVEMETFHLLDLAQRSRGS-VQATAAVLVVANRLSGQVIASDLLKRLESLWGQVILGVI 287          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13841.3004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS17_ECTSI6.030e-16691.59PNP_UDP_1 domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S1RXB5_ALECA5.980e-5440.39Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A2P6NE40_9EUKA3.930e-5138.36PNP_UDP_1 domain-containing protein n=1 Tax=Planop... [more]
A0A7S2HMB2_9STRA5.230e-5146.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SVQ5_9STRA1.320e-5038.16Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A4D9CWQ0_9STRA3.050e-5040.98PNP_UDP_1 domain-containing protein n=2 Tax=Monodo... [more]
A0A7R9Y8J0_9VIRI5.920e-5039.09Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S0AES0_9DINO1.990e-4937.94Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S3BCG4_9VIRI7.740e-4938.51Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
W2PHG5_PHYPN2.460e-4839.22PNP_UDP_1 domain-containing protein n=8 Tax=Phytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13841contigEcto-sp13_S_contig13841:899..3115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score452.2
Seed ortholog evalue1.7e-124
Seed eggNOG ortholog2880.D7FS17
Model size1693
KEGG rclassRC00063
KEGG koko:K00757
KEGG ReactionR01876,R02484,R08229
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.Phosphorylase superfamily
EggNOG OGs2RXRP@2759,COG2820@1
Ec32 ortholog descriptionNucleoside phosphorylase
Ec32 orthologEc-12_006840.1
EC2.4.2.3
Cds size831
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462738.4044719-UTR-Ecto-sp13_S_contig13841:898..10001681462738.4044719-UTR-Ecto-sp13_S_contig13841:898..1000Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13841 899..1000 +
1681462738.445348-UTR-Ecto-sp13_S_contig13841:2355..31151681462738.445348-UTR-Ecto-sp13_S_contig13841:2355..3115Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig13841 2356..3115 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462738.416882-CDS-Ecto-sp13_S_contig13841:1000..15561681462738.416882-CDS-Ecto-sp13_S_contig13841:1000..1556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13841 1001..1556 +
1681462738.4293392-CDS-Ecto-sp13_S_contig13841:1793..19571681462738.4293392-CDS-Ecto-sp13_S_contig13841:1793..1957Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13841 1794..1957 +
1681462738.437406-CDS-Ecto-sp13_S_contig13841:2244..23551681462738.437406-CDS-Ecto-sp13_S_contig13841:2244..2355Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13841 2245..2355 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13841.3004.1prot_Ecto-sp13_S_contig13841.3004.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13841 1001..2355 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13841.3004.1

>prot_Ecto-sp13_S_contig13841.3004.1 ID=prot_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=277bp
MHTTAGTPKDDDNNNINDHDNNTKNSSSSSTSTTRRSKRGFVTHTGTYNG
VPVSIVLINMGYPNMDFFVREVRAVTTGPLRIVRLGSCAGLRPDLPVGSV
AVASEGSVMIRQNPDAWEGTATRGEAQGEPYLFHGMAPADEELSEALLKE
LKRSLDGEAGSSDGGGGTAVVGCLNASTDSFYSSQGRLDPSFEDRNSDIL
SSLLERHPSAGSFEMETFQLLHLARLCRKSKVQASAAAIVLANRIADDAI
AIDRISRIERAAGEAALRAVTSFGDA*
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mRNA from alignment at Ecto-sp13_S_contig13841:899..3115+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13841.3004.1 ID=mRNA_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2217bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13841:899..3115+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTACACATCTGTCTGCATCCGCGAGCAGTGGCCAACAACATCGTCACGGT CGGAAGCGAGGGGCGCGGAGAGATCCTTGCGTCACTCTTGGACGGCACCA CCATGCACACTACCGCCGGCACCCCGAAGGATGACGACAACAACAACATC AACGACCACGACAACAACACCAAAAACAGCAGCAGCAGTAGCACATCAAC CACCAGGCGAAGCAAGCGGGGCTTCGTTACCCACACGGGGACCTACAACG GAGTGCCCGTGTCGATCGTGCTGATAAACATGGGCTACCCAAACATGGAC TTCTTCGTGCGGGAGGTGAGGGCGGTGACGACGGGACCGCTCCGCATCGT CCGCCTCGGGTCTTGCGCCGGACTGCGCCCCGACCTGCCCGTCGGCAGCG TGGCAGTTGCGAGCGAGGGCTCCGTTATGATTCGCCAAAATCCGGACGCT TGGGAAGGGACGGCCACGAGAGGAGAAGCTCAAGGCGAGCCGTACCTGTT CCACGGGATGGCCCCCGCAGACGAAGAGCTGTCCGAAGCGCTGCTGAAGG AGCTCAAGCGCTCGCTGGATGGCGAGGCGGGCAGCAGCGACGGCGGTGGC GGGACGGCCGTGGTGGGATGCTTGAATGCCTCGACGGACAGCTTCTACAG CAGCCAAGGTGTGGGAAGCGTCGAAACGAGTTGGTCCCGTGGACGATGCT CTTTCGATGGAGAGGTAGTCACAAAATAATTGTTGCAAACATAGGTAAGG CGTAGCTTCGCAACCCTACCCGAGGGTCACGCGATGGGTCCCGCACACAG ACGGGTGTGACACAGACAGGCCGAGGGACGAGCTCAGAGCAACCTTTCGA TTCCTTTCCATCCGACACCCTTCTCTCGTTCGTTTGTCGCCTCAGGCCGT CTCGACCCAAGCTTTGAAGACCGCAACAGCGATATCTTGTCGAGTTTGCT TGAGCGACACCCCTCGGCGGGGAGCTTCGAGATGGAGACGTTTCAGCTGC TGCACCTCGCTCGCCTCTGTCGAAAGAGCAAGGTGCAGGCGTCGGCCGCA GCCATAGTGGTGAGAGAAGCCGAGAGGTTGAGGGAGAGCAGCTCGGCGAC GACAAGTATCGCCCAGTGTTGAAGTGGAGGAAATGGGCACACACTCGTGT GTCGTGGTTGTCGGTGTTTTGTCCAGCACGAGACTTCTGGCAACAAAGCT CGTCTTGGTTCCGGAGCTTATGTTAAGACAATAAGAAAAAAACACGGCTG GCGAAAGGGAGATTGTTTCTCCTTGCGCTCTGTACCTCACACGTGCTCAC CCCTCCCCCCCCCCCCCGAACCCTCTGCTCTTCCCCTGGCACCCAGCTTG CCAACCGGATCGCGGACGACGCCATCGCAATCGACAGGATCTCACGGATC GAGCGCGCAGCGGGGGAGGCCGCCTTGCGAGCCGTCACGTCCTTCGGCGA CGCCTGAGAGACGCTACGGCGGGAGTTACGCATTTTCATGCGTTCTGGGG ACTGTACGCGTGCCGCATCCTCCTCGCTCCCCGTGGCTTCTGTATTGGGT CGCCGTGTGCTATTTTCTCGCCGCTGGTAGAAGGTCGGCTAGCTTGACGA CATGATGGCGGGCATGGGAGGTCATGACAACGGCAAAAAAAACTCCTGAA GATTTTCAATTCTTCTGCCGTCGCGTGGTCGTGCGCGGCTACTCCGTCCG GGAGCTTTGTCCAGCTGGTGGCGGGTTCGGTACACTACACGCCGCCACCG CTATTATTACTAGTTAATCGTGCGAATTGGGCACGAGGTACATGCTACCA CCTTCTTGTGGCTACAACAGCTCTACGTTGTTCGAAAATTATTGGTTCGA TGTTTATTGGCAGACAGCCTGTCCGCCCATTCATGTGCCCCTCCCTCTGG CTGCCTCTGGCCGTCGTTTGATCGCCTGTTGGCTCCGTTGTGTAGGCTAT GCTATGCTAGTGGACCCGATGTGATCAACATGTTTTCTACATGTTCAACC TTTAACTGTGACACTTTTCGTTGTCCCGTAGAAGAGGAGCGGAGAACGTA GTTGCTGTTTCCGCGACAGCGCCGCAAGGTAACCTTTTATTTTTCCTACT TTTCGGACCACCTGTTCTCACCAGTCTATACTGCGTATTGACATATTGTG TTGGTAATTTGTCAGCGACGCTGGCGGGAGGGTTGCTTGATATATCGGGG AATTTCGGGGCTGGGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13841:899..3115+

>mRNA_Ecto-sp13_S_contig13841.3004.1 ID=mRNA_Ecto-sp13_S_contig13841.3004.1|Name=mRNA_Ecto-sp13_S_contig13841.3004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=831bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13841:899..3115+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACACTACCGCCGGCACCCCGAAGGATGACGACAACAACAACATCAA
CGACCACGACAACAACACCAAAAACAGCAGCAGCAGTAGCACATCAACCA
CCAGGCGAAGCAAGCGGGGCTTCGTTACCCACACGGGGACCTACAACGGA
GTGCCCGTGTCGATCGTGCTGATAAACATGGGCTACCCAAACATGGACTT
CTTCGTGCGGGAGGTGAGGGCGGTGACGACGGGACCGCTCCGCATCGTCC
GCCTCGGGTCTTGCGCCGGACTGCGCCCCGACCTGCCCGTCGGCAGCGTG
GCAGTTGCGAGCGAGGGCTCCGTTATGATTCGCCAAAATCCGGACGCTTG
GGAAGGGACGGCCACGAGAGGAGAAGCTCAAGGCGAGCCGTACCTGTTCC
ACGGGATGGCCCCCGCAGACGAAGAGCTGTCCGAAGCGCTGCTGAAGGAG
CTCAAGCGCTCGCTGGATGGCGAGGCGGGCAGCAGCGACGGCGGTGGCGG
GACGGCCGTGGTGGGATGCTTGAATGCCTCGACGGACAGCTTCTACAGCA
GCCAAGGCCGTCTCGACCCAAGCTTTGAAGACCGCAACAGCGATATCTTG
TCGAGTTTGCTTGAGCGACACCCCTCGGCGGGGAGCTTCGAGATGGAGAC
GTTTCAGCTGCTGCACCTCGCTCGCCTCTGTCGAAAGAGCAAGGTGCAGG
CGTCGGCCGCAGCCATAGTGCTTGCCAACCGGATCGCGGACGACGCCATC
GCAATCGACAGGATCTCACGGATCGAGCGCGCAGCGGGGGAGGCCGCCTT
GCGAGCCGTCACGTCCTTCGGCGACGCCTGA
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