mRNA_Ecto-sp13_S_contig13835.2999.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: D7FKA0_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKA0_ECTSI) HSP 1 Score: 249 bits (635), Expect = 5.080e-75 Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 1
Query: 37 QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQ IFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK
Sbjct: 332 QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQ---IFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 451
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A6H5JYD5_9PHAE (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD5_9PHAE) HSP 1 Score: 234 bits (597), Expect = 2.420e-70 Identity = 117/131 (89.31%), Postives = 117/131 (89.31%), Query Frame = 1
Query: 37 QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARG--------IFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARG IFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSAS TNK
Sbjct: 221 QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGANQSSIEEIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASDDATAVTNK 351
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A835YQF5_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF5_9STRA) HSP 1 Score: 234 bits (598), Expect = 5.960e-70 Identity = 109/127 (85.83%), Postives = 119/127 (93.70%), Query Frame = 1
Query: 25 STISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
S + Q +IFVVHGGLFPHDGVT +HI+GMSRKREPPIHG +FEDQ +FEAMLWSDPRPIQGRQ+SARGAGVEFGQD+THEFLRTNHAAL+IRSHECVREGFELLHSGRLITLFSASRYCG+QTNK
Sbjct: 326 SALIQGKIFVVHGGLFPHDGVTFDHIRGMSRKREPPIHGEAFEDQ---LFEAMLWSDPRPIQGRQLSARGAGVEFGQDVTHEFLRTNHAALVIRSHECVREGFELLHSGRLITLFSASRYCGLQTNK 449
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: W7TZP1_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZP1_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.340e-52 Identity = 84/124 (67.74%), Postives = 108/124 (87.10%), Query Frame = 1
Query: 37 QERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRP-IQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
QE+IFVVHGGLF +D V+L+H++G+SRKREPP+H + FED+ ++E MLWSDPR + G+Q+S RGAG+EFGQD+T EFLRTN ALI+RSHECV EG++L+H+GRL+TLFSASRYCG+QTNK
Sbjct: 351 QEKIFVVHGGLFSNDAVSLDHLRGISRKREPPVHSDVFEDR---LYEEMLWSDPRAHLAGKQISTRGAGIEFGQDVTFEFLRTNQLALIVRSHECVAEGYDLVHNGRLMTLFSASRYCGLQTNK 471
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: M4BRF7_HYAAE (Serine/threonine-protein phosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRF7_HYAAE) HSP 1 Score: 179 bits (454), Expect = 2.130e-50 Identity = 85/125 (68.00%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
+ Q++IFVVHGGLF D VTL H++G+SRKREPP+H +FED+ IFE MLWSDPRPIQ RQ S RGAGVEFG +T+ F N ALIIRSHECV +G+E+LH GRLITLFSASRYCG Q NK
Sbjct: 70 VLQQKIFVVHGGLFSRDNVTLAHLRGISRKREPPLHETNFEDK---IFEDMLWSDPRPIQSRQPSERGAGVEFGIHVTNNFCLVNKIALIIRSHECVLDGYEILHGGRLITLFSASRYCGTQMNK 191
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: H3GLM9_PHYRM (Serine/threonine-protein phosphatase n=22 Tax=Phytophthora TaxID=4783 RepID=H3GLM9_PHYRM) HSP 1 Score: 180 bits (457), Expect = 4.260e-50 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
+ Q++IFVVHGGLF D VTL H++G++RKREPP+H +FED+ IFE MLWSDPRPIQ RQ S RGAGVEFG ++T+ F N ALIIRSHECV EGFE+LH GRLITLFSASRYCG Q NK
Sbjct: 335 VLQQKIFVVHGGLFSRDNVTLAHLRGIARKREPPLHQTNFEDK---IFEDMLWSDPRPIQTRQPSERGAGVEFGVNVTNNFCLVNKIALIIRSHECVIEGFEILHGGRLITLFSASRYCGTQMNK 456
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A3F2RNE9_9STRA (Serine/threonine-protein phosphatase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RNE9_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.040e-49 Identity = 86/125 (68.80%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
+ Q++IFVVHGGLF D VTL H++G++RKREPP+H +FED+ IFE MLWSDPRPIQ RQ S RGAGVEFG +T+ F N ALIIRSHECV EGFE+LH GRLITLFSASRYCG Q NK
Sbjct: 313 VLQQKIFVVHGGLFSRDNVTLAHLRGITRKREPPLHQMNFEDK---IFEDMLWSDPRPIQTRQPSERGAGVEFGVSVTNNFCLVNKIALIIRSHECVVEGFEILHGGRLITLFSASRYCGTQMNK 434
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A662XRH0_9STRA (Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRH0_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.710e-49 Identity = 85/125 (68.00%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
+ Q +IFVVHGGLF D VTL H++G++RKREPP+H FED+ IFE MLWSDPR IQ RQ S RGAGVEFG ++T+ F N ALIIRSHECV EGFE+LH GRLITLFSASRYCG Q NK
Sbjct: 418 VLQSKIFVVHGGLFSRDNVTLAHLRGIARKREPPLHQLGFEDK---IFEDMLWSDPRAIQSRQPSERGAGVEFGVNVTNNFCLVNKIALIIRSHECVPEGFEILHGGRLITLFSASRYCGTQMNK 539
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A3R7XX99_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7XX99_9STRA) HSP 1 Score: 177 bits (450), Expect = 4.750e-49 Identity = 86/125 (68.80%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
I Q++IFVVHGGLF D VTL H++G+SRKREPP+H +F+D+ IFE +LWSDPRPIQ RQ S RGAGVEFG +T+ F N ALIIRSHECV EGFE+LH GRLITLFSASRYCG Q NK
Sbjct: 1119 IIQDKIFVVHGGLFSRDNVTLAHLRGISRKREPPLHQLNFQDK---IFEDLLWSDPRPIQSRQPSERGAGVEFGITVTNNFCFVNKIALIIRSHECVIEGFEILHGGRLITLFSASRYCGTQMNK 1240
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Match: A0A8K1C608_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C608_PYTOL) HSP 1 Score: 177 bits (448), Expect = 7.010e-49 Identity = 83/125 (66.40%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 31 ISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFEDQARGIFEAMLWSDPRPIQGRQMSARGAGVEFGQDITHEFLRTNHAALIIRSHECVREGFELLHSGRLITLFSASRYCGMQTNK 405
+ Q++IFVVHGGLF D VTL H+K +SRKREPP+H +ED+ I+E MLWSDPR IQ RQ S RGAGVEFG ++T+ F N AL+IRSHECV+EGFE+LH GRLITLFSASRYCG Q NK
Sbjct: 339 VIQQKIFVVHGGLFSRDNVTLAHLKAISRKREPPLHQTGYEDK---IYEDMLWSDPRSIQSRQPSERGAGVEFGVEVTNNFCLVNKIALVIRSHECVQEGFEILHGGRLITLFSASRYCGTQMNK 460 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13835.2999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13835.2999.1 >prot_Ecto-sp13_S_contig13835.2999.1 ID=prot_Ecto-sp13_S_contig13835.2999.1|Name=mRNA_Ecto-sp13_S_contig13835.2999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp MHPTDRRHSTISQERIFVVHGGLFPHDGVTLNHIKGMSRKREPPIHGNSFback to top mRNA from alignment at Ecto-sp13_S_contig13835:2820..4595+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13835.2999.1 ID=mRNA_Ecto-sp13_S_contig13835.2999.1|Name=mRNA_Ecto-sp13_S_contig13835.2999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1776bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13835:2820..4595+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13835:2820..4595+ >mRNA_Ecto-sp13_S_contig13835.2999.1 ID=mRNA_Ecto-sp13_S_contig13835.2999.1|Name=mRNA_Ecto-sp13_S_contig13835.2999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13835:2820..4595+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |