prot_Ecto-sp13_S_contig13817.2988.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13817.2988.1
Unique Nameprot_Ecto-sp13_S_contig13817.2988.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13817.2988.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.750e-31
Identity = 66/78 (84.62%), Postives = 70/78 (89.74%), Query Frame = 0 
Query:    1 DANPPNVLAGDAASGSIRPRRASATRQVPEERQRSPPSLSVLPLRPHEVSGDASTDNGGSRGGDSRVGDDVPVSRERR 78
            DA PPNVLAG AASGSI PR+ASA  QVP ER RSPPSLS+LPLRPHEVSGDASTDNGGSRGGDS VGD++PVSRERR
Sbjct: 1096 DATPPNVLAGGAASGSIHPRQASAAGQVPAERPRSPPSLSLLPLRPHEVSGDASTDNGGSRGGDSSVGDNMPVSRERR 1173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13817.2988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB68_ECTSI2.750e-3184.62Cyclic nucleotide-binding domain-containing protei... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13817contigEcto-sp13_S_contig13817:777..1016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13817.2988.1mRNA_Ecto-sp13_S_contig13817.2988.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13817 777..1017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13817.2988.1 ID=prot_Ecto-sp13_S_contig13817.2988.1|Name=mRNA_Ecto-sp13_S_contig13817.2988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp
DANPPNVLAGDAASGSIRPRRASATRQVPEERQRSPPSLSVLPLRPHEVS
GDASTDNGGSRGGDSRVGDDVPVSRERRRM
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