mRNA_Ecto-sp13_S_contig13775.2963.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.070e-57 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 1
Query: 1 MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISDISK 264
MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNV+LGTWVYRISDISK
Sbjct: 132 MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVDLGTWVYRISDISK 219
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A835Z5V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V8_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.050e-33 Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 1 MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISDISK 264
MELSG GL+ K+V+ VEL WKTG+E GN+GF+VS+R KTDEW +IASYKD+ PLNSKG GG YT+ D + E GTWVYR+SD++
Sbjct: 128 MELSGLGLNIKQVNGNDVELEWKTGDEAGNLGFVVSKRRGKTDEWTQIASYKDWAPLNSKGEQGGRYTFVDPDCEQGTWVYRVSDVNS 215
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK) HSP 1 Score: 115 bits (289), Expect = 5.150e-30 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISDIS 261
MELSG GL K V DE E++W TG+E GN GFI+++R +D+WQ +ASY D+ PLNSKGP GG YTY D + E GTW+YR+SD++
Sbjct: 124 MELSGVGLKTKMVGDEC-EISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDWAPLNSKGPAGGQYTYMDSDTEQGTWIYRVSDVN 209
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A6U5EDM8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5EDM8_9EUKA) HSP 1 Score: 99.0 bits (245), Expect = 3.070e-23 Identity = 47/85 (55.29%), Postives = 58/85 (68.24%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNV-ELGTWVYRISD 255
EL G GL +K +S+E VEL W TGNE GN GF+V RRA ++ ++ IASY+ L SKGP GG+Y Y DD V GTWVYR+ D
Sbjct: 143 ELGGGGLRSKILSEEEVELRWSTGNEAGNEGFLVQRRAGGSNNFEVIASYEKVGALKSKGPQGGVYAYLDDTVPSTGTWVYRVLD 227
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A7S3ZJZ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJZ7_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.020e-22 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRI 249
EL+G GL AK +S++ VELTW T +EE N GF+V R+A +W E+ASY+ + PL SKG GG Y+Y D V G W+YRI
Sbjct: 146 ELTGLGLKAKVLSEDEVELTWSTDDEEANRGFLVERKAVGYSDWDEVASYQSWSPLKSKGTLGGAYSYIDATVSEGEWLYRI 227
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A7S0T6E7_9RHOD (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6E7_9RHOD) HSP 1 Score: 95.5 bits (236), Expect = 6.260e-22 Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPP-LNSKGPGGGIYTYADDNVELGTWVYRISDISK 264
EL+G+GL K + DE+ ELTW TG+E GN+GF++ +R K+D+++ + YK P SKGP GG+Y+Y E GTW+YR+SD+++
Sbjct: 148 ELAGSGLKWKLLGDEL-ELTWATGDETGNVGFMLQKRRGKSDKFELVDDYKSLPATFQSKGPAGGVYSYLGPKPEPGTWIYRVSDVAE 234
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A7R9W2U1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2U1_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 9.090e-22 Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISDISK 264
ELSG GL++K + E VEL W T E GFIV RR AKT+E++ +ASY+D+ PL SKG GG+Y Y D+ V G WVYRIS++
Sbjct: 198 ELSGTGLNSKIIDGE-VELEWATRTERDTKGFIVKRRPAKTNEFEPLASYEDWGPLQSKGAEGGVYRYLDNTVTPGGWVYRISEVDN 283
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A0M0JEB6_9EUKA (Peptidase s8 s53 subtilisin kexin sedolisin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEB6_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 1.030e-21 Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 10 SGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISD 255
+G GL +K +S+E VEL W T +E GN GFIV RR E+ +IASYK F PL +KG GG Y + DD V GTWVYRI D
Sbjct: 151 AGGGLKSKVLSEEEVELRWSTQDEVGNAGFIVQRRKGGQPEFADIASYKSFSPLKTKGVAGGEYVFLDDAVSPGTWVYRILD 232
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: A0A7S2ZH05_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH05_9RHOD) HSP 1 Score: 94.7 bits (234), Expect = 1.170e-21 Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPP-LNSKGPGGGIYTYADDNVELGTWVYRISDISK 264
EL+G GL K + DE++ LTW TG+E N GF++ +R KTDEW +IA + P L SKG GG Y++ D + E GTW+YR+SDI K
Sbjct: 145 ELAGVGLKYKSLGDELL-LTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKGAQGGDYSWLDKSPEPGTWIYRVSDIDK 231
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Match: B8BXV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV5_THAPS) HSP 1 Score: 93.6 bits (231), Expect = 1.740e-21 Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 4 ELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKGPGGGIYTYADDNVELGTWVYRISD 255
ELSG GLS K + E VEL W T +E GFIV RRAAKT+++ IASYKD+ PL SKG GGIY Y D G WVYR+S+
Sbjct: 111 ELSGTGLSYKIIDGE-VELEWATKSEMDTKGFIVKRRAAKTNDYDVIASYKDWGPLASKGKEGGIYRYLDSTATPGGWVYRVSE 193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13775.2963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13775.2963.1 >prot_Ecto-sp13_S_contig13775.2963.1 ID=prot_Ecto-sp13_S_contig13775.2963.1|Name=mRNA_Ecto-sp13_S_contig13775.2963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp MELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASback to top mRNA from alignment at Ecto-sp13_S_contig13775:3244..4183+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13775.2963.1 ID=mRNA_Ecto-sp13_S_contig13775.2963.1|Name=mRNA_Ecto-sp13_S_contig13775.2963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=940bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13775:3244..4183+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13775:3244..4183+ >mRNA_Ecto-sp13_S_contig13775.2963.1 ID=mRNA_Ecto-sp13_S_contig13775.2963.1|Name=mRNA_Ecto-sp13_S_contig13775.2963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13775:3244..4183+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |