prot_Ecto-sp13_S_contig1028.288.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1028.288.1
Unique Nameprot_Ecto-sp13_S_contig1028.288.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: D8LIF1_ECTSI (NUO10 homolog, NADH dehydrogenase (Ubiquinone) subunit 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIF1_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 1.260e-149
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0
Query:    1 MQQTRSTAAVYRAPVALLHTTDKKQEQSSKVQDMRKPTSSELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            MQQTR+TAAVYRAPVALLHTTDKKQEQSSKVQDMRKPTSSELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK
Sbjct:   14 MQQTRATAAVYRAPVALLHTTDKKQEQSSKVQDMRKPTSSELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 225          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A7S2BKW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKW3_9STRA)

HSP 1 Score: 322 bits (824), Expect = 9.220e-110
Identity = 153/173 (88.44%), Postives = 165/173 (95.38%), Query Frame = 0
Query:   40 SELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            S+LT   +V+ LM+  +GGVE+VV+KVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+K NKSLLL+L+K
Sbjct:   29 SDLTARSSVNSLMEDPQGGVEYVVAKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKANKSLLLKLRK 201          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A7S2RSY8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSY8_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.370e-108
Identity = 150/174 (86.21%), Postives = 166/174 (95.40%), Query Frame = 0
Query:   39 SSELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            S+ELT+  NV+ LM+  +GG EFVV+KVDDLVNWAR+GSLWPMTFGLACCAVEMMH+AASRYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+K +K+LLL+++K
Sbjct:   45 STELTQHNNVNSLMENPRGGAEFVVAKVDDLVNWARRGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKSDKTLLLKVRK 218          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A835ZJG3_9STRA (NUO10-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJG3_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.470e-108
Identity = 152/170 (89.41%), Postives = 164/170 (96.47%), Query Frame = 0
Query:   43 TRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            ++ E  DQL+Q  KG VE+VVSKVD+LVNWARKGSLWPMTFGLACCAVEMMH+AASRYD+ERFG+VFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVV+GCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK+KGN+SLLLRL+K
Sbjct:   42 SKVETPDQLLQT-KGKVEYVVSKVDELVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGLVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVKGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKVKGNRSLLLRLRK 210          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: B8C955_THAPS (Oxidored_q6 domain-containing protein n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C955_THAPS)

HSP 1 Score: 319 bits (817), Expect = 1.810e-108
Identity = 158/186 (84.95%), Postives = 168/186 (90.32%), Query Frame = 0
Query:   33 DMRKPTSSELTRAENVDQLMQQGKGGV------EFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            D    T+S LTR + VD+L+  G GGV      E+ VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AASRYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLL+L+K
Sbjct:   32 DKASSTTSSLTRLDGVDELLT-GTGGVPTSNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 216          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A6V1PZF2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PZF2_HETAK)

HSP 1 Score: 318 bits (815), Expect = 3.070e-108
Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0
Query:   36 KPTSSELTRAENVDQLMQ-QGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            K   S+L +A++VD LM  + +  VEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKK+K NKSL LRLKK
Sbjct:   34 KRDESDLKQADSVDGLMNSKAQNSVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKVKTNKSLSLRLKK 211          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: K0S487_THAOC (Oxidored_q6 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S487_THAOC)

HSP 1 Score: 318 bits (816), Expect = 3.160e-108
Identity = 157/181 (86.74%), Postives = 167/181 (92.27%), Query Frame = 0
Query:   38 TSSELTRAENVDQLMQQGKGGV------EFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            T+S LTR E VD+++  G GGV      E+ VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AASRYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLL+L+K
Sbjct:   43 TTSSLTRLEGVDEVLT-GMGGVPVNNKVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLKLRK 222          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A482S463_9ARCH (NADH-quinone oxidoreductase subunit B n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482S463_9ARCH)

HSP 1 Score: 317 bits (811), Expect = 3.320e-108
Identity = 149/172 (86.63%), Postives = 161/172 (93.60%), Query Frame = 0
Query:   41 ELTRAENVDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            +L + ENV +LM Q    +E+VVSK+DD+VNWARKGS+WPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAE LLYG+LQLQKK+K NKSLLLRL+K
Sbjct:    2 QLVKKENVGELMGQAHSNLEYVVSKIDDVVNWARKGSMWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEGLLYGMLQLQKKVKSNKSLLLRLRK 173          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A7R9W5P5_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7R9W5P5_9STRA)

HSP 1 Score: 317 bits (813), Expect = 6.180e-108
Identity = 156/181 (86.19%), Postives = 167/181 (92.27%), Query Frame = 0
Query:   38 TSSELTRAENVDQLMQQGKGGV------EFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            T+S LTR + VD+++  G GGV      E+ VS+VDDLVNWARKGSLWPMTFGLACCAVEMMH+AASRYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALL+GLLQLQKKIKGNKSLLLRL+K
Sbjct:   32 TTSSLTRLDGVDEILT-GTGGVPVENNVEYAVSRVDDLVNWARKGSLWPMTFGLACCAVEMMHAAASRYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLFGLLQLQKKIKGNKSLLLRLRK 211          
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Match: A0A4D9DG66_9STRA (Oxidored_q6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG66_9STRA)

HSP 1 Score: 317 bits (812), Expect = 1.530e-107
Identity = 154/175 (88.00%), Postives = 167/175 (95.43%), Query Frame = 0
Query:   39 SSELTRAEN-VDQLMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKGNKSLLLRLKK 212
            S+E+T+A   VDQL++  K GVE+VVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAA+RYD+ERFGMVFRASPRQSDVMIVAGTL NKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+KGNK LLL+L+K
Sbjct:   54 STEVTKAAGGVDQLLKT-KNGVEYVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAAARYDMERFGMVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGMLQLQKKVKGNKGLLLKLRK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1028.288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIF1_ECTSI1.260e-14999.53NUO10 homolog, NADH dehydrogenase (Ubiquinone) sub... [more]
A0A7S2BKW3_9STRA9.220e-11088.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2RSY8_9STRA1.370e-10886.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZJG3_9STRA1.470e-10889.41NUO10-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
B8C955_THAPS1.810e-10884.95Oxidored_q6 domain-containing protein n=2 Tax=Thal... [more]
A0A6V1PZF2_HETAK3.070e-10888.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K0S487_THAOC3.160e-10886.74Oxidored_q6 domain-containing protein n=1 Tax=Thal... [more]
A0A482S463_9ARCH3.320e-10886.63NADH-quinone oxidoreductase subunit B n=2 Tax=cell... [more]
A0A7R9W5P5_9STRA6.180e-10886.19Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A4D9DG66_9STRA1.530e-10788.00Oxidored_q6 domain-containing protein n=2 Tax=Mono... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.12280coord: 44..210
e-value: 1.1E-80
score: 271.0
NoneNo IPR availablePANTHERPTHR11995:SF19NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIALcoord: 25..211
NoneNo IPR availablePANTHERPTHR11995NADH DEHYDROGENASEcoord: 25..211
NoneNo IPR availableSUPERFAMILY56770HydA/Nqo6-likecoord: 60..204
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitPFAMPF01058Oxidored_q6coord: 87..196
e-value: 6.7E-24
score: 84.2
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitTIGRFAMTIGR01957TIGR01957coord: 61..202
e-value: 9.7E-78
score: 257.0
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitPROSITEPS01150COMPLEX1_20Kcoord: 168..184
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitHAMAPMF_01356NDH1_NuoBcoord: 57..201
score: 42.233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1028contigEcto-sp13_S_contig1028:6772..12687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1028.288.1mRNA_Ecto-sp13_S_contig1028.288.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1028 5496..12711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1028.288.1 ID=prot_Ecto-sp13_S_contig1028.288.1|Name=mRNA_Ecto-sp13_S_contig1028.288.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
MQQTRSTAAVYRAPVALLHTTDKKQEQSSKVQDMRKPTSSELTRAENVDQ
LMQQGKGGVEFVVSKVDDLVNWARKGSLWPMTFGLACCAVEMMHSAASRY
DLERFGMVFRASPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVVSMG
SCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKI
KGNKSLLLRLKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006137NADH_UbQ_OxRdtase-like_20kDa
IPR006138NADH_UQ_OxRdtase_20Kd_su