mRNA_Ecto-sp13_S_contig13657.2884.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13657.2884.1
Unique NamemRNA_Ecto-sp13_S_contig13657.2884.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: D7FGT7_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT7_ECTSI)

HSP 1 Score: 800 bits (2067), Expect = 2.850e-283
Identity = 500/603 (82.92%), Postives = 507/603 (84.08%), Query Frame = 1
Query:    1 MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETAMVSSHRGHHGSSSFVAPRAGSPRLRRRWRPALVHRRFLVLEVTYVSARNGRGCLEKVLMALEQQGPQEDTDTAPAVAAAA---GEAATVDLPADDSGEGTGMAHQRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLG----MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXX-MASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1785
            MEDFTKSMK GRGPQA+RGAP KGQGRLTKWAQ+QRAT DGALAGGEET MVSSH GHHGSSSFVAPRAGSP  RRRWRPALVHRRFLVLEVTYVSARNGRGC EKVLMALEQQ  QED              GEAAT +LPADDSGEG GMA QRKITL+GDWYDCEVEPGDGVHVLFPMPAA            MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLA XXXXXXXXXX                         LLTPQ+MAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXX        XXXXX   XXXXXXXXXXXXXXX  MASL SDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEA VEPLVGG           GGAPSLVMPVEVKTGKR GEANS+HRAQVMLYTLLLRMRYGHDAS  GLLVYTAADGL TELVSPVAAEIRALILARNRLATGM EIGRVGLVGGDA+GXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD
Sbjct:    1 MEDFTKSMKIGRGPQADRGAPDKGQGRLTKWAQQQRATADGALAGGEETPMVSSHHGHHGSSSFVAPRAGSPSPRRRWRPALVHRRFLVLEVTYVSARNGRGCREKVLMALEQQDSQEDPXXXXXXXXXXXXXGEAATANLPADDSGEGAGMAQQRKITLLGDWYDCEVEPGDGVHVLFPMPAAXXXXXXXXXXXXMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAAXXXXXXXXXXGWQGQGRGGGAPP------------LLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXGLRRSPHSXXXXXXXXXXXXXXXXXXXXXXXGGMASLTSDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGG-----------GGAPSLVMPVEVKTGKRKGEANSTHRAQVMLYTLLLRMRYGHDASTSGLLVYTAADGLRTELVSPVAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 580          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE)

HSP 1 Score: 771 bits (1992), Expect = 1.370e-255
Identity = 505/609 (82.92%), Postives = 515/609 (84.56%), Query Frame = 1
Query:    1 MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETAMVSSHRGHHGSSSFVAPRAGSPRLRRRWRPALVHRRFLVLEVTYVSARNGRGCLEKVLMALEQQGPQEDTDTAPAVAAAAG----EAATVDLPADDSGEGTGMAHQRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLG----MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRN-GXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMAS-----LASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1785
            MEDFTKSMKN RGPQA+RG P KGQGRLT+WAQ+QR   DGALAG EE A++SS   H GSSSFVAPRAGSP  RRRWRPALVHRRFLVLEVTYVSARNGR C EKVLMALEQQGPQED DTAP           EAATV+LPADD GEG GMA QRKITL+GDWYDCEVEPGD VHVLFPMPA             MEEEA+RDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LLTPQ+MAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRN GXXXXXXXXXXX          R  XXXXXXXXXXXXXXXX        L SDGAMAATVAV RVLATEDDVWSPVLGLKGIMDATVEA VEPLVG            GGAP LVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYG DAS RGLLVYTAADGLHTELVSP AAEIRALILARNRLATGM EIGRVGLVGGDA+GXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD
Sbjct:  520 MEDFTKSMKNDRGPQADRGVPDKGQGRLTEWAQQQRVMADGALAGSEEAAVISSDHDHRGSSSFVAPRAGSPSPRRRWRPALVHRRFLVLEVTYVSARNGRSCREKVLMALEQQGPQEDPDTAPXXXXXXXXXXXEAATVNLPADDHGEGAGMAQQRKITLLGDWYDCEVEPGDRVHVLFPMPAXXXXXXXXXXXXXMEEEATRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------LLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNDGXXXXXXXXXXXSGLRRFAHSGRXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDGAMAATVAVYRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGRGGG--------GGAPLLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGQDASTRGLLVYTAADGLHTELVSPAAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1112          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: D0NLR3_PHYIT (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NLR3_PHYIT)

HSP 1 Score: 152 bits (384), Expect = 5.660e-35
Identity = 138/450 (30.67%), Postives = 192/450 (42.67%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEE---ASRD---VVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAV-EPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            Q +  L  DWYD  VE GD ++++F         EG    ++   ASR    ++VDNA   +VVVHPDILVSPT+V  +  C R+AVLQ  LA +   SK A +G LKH+LFE +LL                                     L     + E   RIV   +  L   G +E+ A  EL  V      W  + ++ +G                                                       VSR+L+TE+ +WS   GLKG  DA+VE  + +P  G            G A S+V+P+E+KTG +   A   H+ QV+LYTLLL  RY     + GLL+Y     + T  ++ +A  +R LI+ RN  A+    I +V  +GG              PP+IR  R+C  CFQ  EC+L+H A E G
Sbjct:  386 QLEAKLSDDWYDVLVEAGDSINIVFTEQDR----EGFFTHDDETPASRQQSRILVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTSKKAFLGTLKHDLFERALL-----------------------------------DGLNDSVALLEEAKRIVDFNILGLVECGLNEEEALFELQRVVEDYRLWVNAAVMGSGTPLNDVPPKAGSKAH----------------------------------------VSRILSTEEMMWSIKWGLKGATDASVEGTIIDPGRGN----------TGPAGSVVLPLELKTGSK-QYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRIAAMATHVRGLIMTRNNFASA---IAKVKAIGGSTSAQ-------VFPPMIRNRRDCERCFQVDECVLHHAATENG 731          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A0W8DK77_PHYNI (DNA replication ATP-dependent helicase/nuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DK77_PHYNI)

HSP 1 Score: 148 bits (373), Expect = 1.310e-33
Identity = 136/447 (30.43%), Postives = 190/447 (42.51%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFP---MPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAA-VEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            Q +  L  DWYD  VE GD ++++F         +      +    SR +VVDNA   +VVVHPDILVSPT+V  +  C R+AVLQ  LA +   +K A +G LKH+LFE +LL                                     L   + + E   +IV S +  L   G +E+    EL  V      W    +  +G                                              +G+ A    V+R+L+TE+ +WS   GLKG  DA+VE   V P  GG               S+V+P+E+KTG +   A   H+ QV+LYTLLL  RY     + GLL+Y     + T  ++ +A  +R LI+ RN  A+    I +V  +GG              PP+IR  REC  CFQ  EC+L+H A E G
Sbjct:  181 QLEAQLSEDWYDVLVEAGDTINIVFTEQDRDGFFSQDNKTPVSRHLSR-IVVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTNKKAFLGTLKHDLFEHALL-----------------------------------NGLNNAEALLEEAKQIVNSNILGLVECGLNEEETLFELQRVIEDYRSWVNGAMAGSGTPLNEIPP-------------------------------------KNGSKAR---VTRILSTEEMMWSIKWGLKGATDASVEGTIVNP--GGKNGERTG--------SVVLPLELKTGSK-KYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRITAMATHVRGLIMTRNNFASA---IAKVKSIGGSTSAQ-------VFPPMIRNRRECERCFQVDECVLHHAATENG 526          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A484E6F4_BRELC (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6F4_BRELC)

HSP 1 Score: 142 bits (357), Expect = 1.440e-31
Identity = 129/443 (29.12%), Postives = 189/443 (42.66%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            Q +  L  DWY+  V+ GD ++++F       +      EE     + VD A   LVVVHPDILVSPT+V  +  C R+AV+Q  LA     +K A +G LKHELFE +LL                                     L   + + E   +IV + +  L   G +E+ A  EL  V      W  + +  +G                                        + +  +   ++  + VSRV++TE+ +WS   GLKG  DA++E  +  L  G               S++ P+E+KTG +   A   H+ QV+LYTLLL  RY     + GLLVY     + T  +S  ++ +R L++ARN  A+ M    +V    G A            PP+IR+ REC  CFQ  EC+L+H A E G
Sbjct:  359 QLEAILQDDWYELTVDAGDTINLIFTEQFKEKS------EEGRQEQIWVDKAKN-LVVVHPDILVSPTRVTTSFGCLRRAVVQETLAVAGVMNKKAFLGTLKHELFEFALL-----------------------------------NGLDKTRGLYEAATQIVQTNILGLVECGINEEDAFFELERVIEDFRSWISAAMFGSGT---------------------------------------LLNETTLNNVSKKIHVSRVISTEEMMWSIKWGLKGATDASIEGNIVSL--GKRRSEETE-------SVIFPLELKTGSKKFAA-LEHQGQVILYTLLLNERY-RQRCQDGLLVYVPP--IETNRISVNSSHVRGLVMARNNFASAM---AKVKSFSGSASAQ-------VYPPMIRKRRECERCFQVDECVLHHAATENG 697          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A3PDE1_9STRA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3PDE1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.720e-31
Identity = 127/447 (28.41%), Postives = 187/447 (41.83%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            Q +  L  DW+D  VE GD ++++F         +  G  + +   +SR + VDN    +VVVHPDILVSPT+V  +  C R+AV+Q  LA   +  + A +G LKH+LFE ++                                      L + + + +   RIV S +  L   G +E+ A  EL  V      W    +  +G                                              +G+    V VSRVLATE+ +WS   GLKG  DA+VE  +                 G A S V+P+E+KTG +   A   H+ QV+LYTLLL  RY       GLL+Y     + T  ++ +A  +R LI+ARN  A+ + ++  +G                  PP+I+   +C  CFQ  EC+L+H A E G
Sbjct:  372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAMENG 718          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A4FXC4_9STRA (DNA replication ATP-dependent helicase/nuclease n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FXC4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.940e-31
Identity = 127/447 (28.41%), Postives = 187/447 (41.83%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            Q +  L  DW+D  VE GD ++++F         +  G  + +   +SR + VDN    +VVVHPDILVSPT+V  +  C R+AV+Q  LA   +  + A +G LKH+LFE ++                                      L + + + +   RIV S +  L   G +E+ A  EL  V      W    +  +G                                              +G+    V VSRVLATE+ +WS   GLKG  DA+VE  +                 G A S V+P+E+KTG +   A   H+ QV+LYTLLL  RY       GLL+Y     + T  ++ +A  +R LI+ARN  A+ + ++  +G                  PP+I+   +C  CFQ  EC+L+H A E G
Sbjct:  372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAMENG 718          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A3NZH4_9STRA (DNA replication ATP-dependent helicase/nuclease n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NZH4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.600e-31
Identity = 126/445 (28.31%), Postives = 186/445 (41.80%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAE 1776
            Q +  L  DW+D  VE GD ++++F         +  G  + +   +SR + VDN    +VVVHPDILVSPT+V  +  C R+AV+Q  LA   +  + A +G LKH+LFE ++                                      L + + + +   RIV S +  L   G +E+ A  EL  V      W    +  +G                                              +G+    V VSRVLATE+ +WS   GLKG  DA+VE  +                 G A S V+P+E+KTG +   A   H+ QV+LYTLLL  RY       GLL+Y     + T  ++ +A  +R LI+ARN  A+ + ++  +G                  PP+I+   +C  CFQ  EC+L+H A E
Sbjct:  372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAME 716          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: S8AHV7_DACHA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AHV7_DACHA)

HSP 1 Score: 133 bits (335), Expect = 8.600e-29
Identity = 114/443 (25.73%), Postives = 180/443 (40.63%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            +R++ L   W DC+V  GD V+V+               ++E     ++DN    L ++HPDIL+S T VA++  C R A L+ R+ + +  S+ +V GN+ HELF+ +L A                                      +  F+ + ++RI+ +Q++ LY        A   L +    + +W +SF+                         R+P                           + +A+ +VL  E+ +WSP  GLKG MD TVE  ++ L G                +L  P+E+KTG+     N +HRAQ MLYTLL+  RY  + S  G+L YT      T  +  +  E+R L++ RN LA                           LPP+++  R CG C+  + C +YHR  E G
Sbjct:  613 ERRVLLRQSWMDCDVREGDVVNVIGAF------------DDETC---IIDNTQNML-ILHPDILLSATAVADSFDCIRLATLKERVKAISDASEWSVYGNILHELFQAALSAND-----------------------------------FSSAFLEKEINRILSAQMQNLYAVRVTPGTAMDHLRTKLPPLQEWAKSFVSAR------------PQHDAIAKGHRAPD--------------------------SNLAIRKVLDVEEHIWSPKFGLKGNMDVTVEIEIQDLKGSR--------------TLTAPLELKTGRNT--KNMTHRAQTMLYTLLMSDRYDIE-SLCGILYYTETS--ETLRIPNLTDELRGLMIGRNHLAR-------------------FIYSKLDLPPMLQDKRTCGRCYAKTSCFVYHRTMENG 928          
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: W7HXZ1_9PEZI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HXZ1_9PEZI)

HSP 1 Score: 130 bits (328), Expect = 6.380e-28
Identity = 116/450 (25.78%), Postives = 184/450 (40.89%), Query Frame = 1
Query:  454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMA-------ATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
            +R++ L   W +C+V  GD V+V+                 + ++  ++DN    L ++HPDIL+S T VA++  C R A L+ R+ + +  ++ +V GN+ HELF+T+L A                                      +  F+ + V+RI+ +QL+ LY        A   L +    + DW + F+                                             ++   DGA+A       A +A+ +VL  E+ +WSP  GLKG +D TVE  V+               V G  +L +P+E+KTG+       SHRAQ MLYTLL+  RY  + S  G+L Y       T  +  +  E+R L++ RNRLA                           LPP++   R CG C+  + C ++H+A E G
Sbjct:  604 ERRVLLRQAWVECDVREGDVVNVIGSF--------------DGTQTCIIDNTQNML-ILHPDILLSATAVADSFDCVRLATLKERVKAISDGNQWSVYGNILHELFQTALSAND-----------------------------------FSSAFLEKDVNRILSAQLQNLYAIRVTPSMAVDHLRTKIPMLQDWTKKFV---------------------------------------------SAQPKDGAVATGHRGPDANIAIRKVLDVEEHIWSPKFGLKGNIDVTVEVGVQD--------------VKGKSTLTVPLELKTGRNTKVM--SHRAQTMLYTLLMSDRYDVE-SLCGVLYYLETS--ETIRIPNLMDELRDLMVGRNRLAR-------------------YIYSNIDLPPMLGDKRTCGKCYAKTSCFVFHKATENG 920          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGT7_ECTSI2.850e-28382.92DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A6H5KHP8_9PHAE1.370e-25582.92DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D0NLR3_PHYIT5.660e-3530.67DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A0W8DK77_PHYNI1.310e-3330.43DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A484E6F4_BRELC1.440e-3129.12DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A6A3PDE1_9STRA1.720e-3128.41DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A6A4FXC4_9STRA1.940e-3128.41DNA replication ATP-dependent helicase/nuclease n=... [more]
A0A6A3NZH4_9STRA5.600e-3128.31DNA replication ATP-dependent helicase/nuclease n=... [more]
S8AHV7_DACHA8.600e-2925.73DNA replication ATP-dependent helicase/nuclease n=... [more]
W7HXZ1_9PEZI6.380e-2825.78DNA replication ATP-dependent helicase/nuclease n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13657contigEcto-sp13_S_contig13657:2222..4658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score805.8
Seed ortholog evalue1.3e-230
Seed eggNOG ortholog2880.D7FGT7
Model size1785
KEGG koko:K10742
KEGG Pathwayko03030,map03030
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.single-stranded DNA-dependent ATPase activity
EggNOG OGsCOG1112@1,KOG1805@2759
EC3.6.4.12
Cds size1785
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462729.076065-CDS-Ecto-sp13_S_contig13657:2221..36731681462729.076065-CDS-Ecto-sp13_S_contig13657:2221..3673Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13657 2222..3673 +
1681462729.0865803-CDS-Ecto-sp13_S_contig13657:3992..40891681462729.0865803-CDS-Ecto-sp13_S_contig13657:3992..4089Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13657 3993..4089 +
1681462729.0953872-CDS-Ecto-sp13_S_contig13657:4422..46581681462729.0953872-CDS-Ecto-sp13_S_contig13657:4422..4658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13657 4423..4658 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13657.2884.1prot_Ecto-sp13_S_contig13657.2884.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13657 2222..4658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13657.2884.1

>prot_Ecto-sp13_S_contig13657.2884.1 ID=prot_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bp
MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETA
MVSSHRGHHGSSSFVAPRAGSPRLRRRWRPALVHRRFLVLEVTYVSARNG
RGCLEKVLMALEQQGPQEDTDTAPAVAAAAGEAATVDLPADDSGEGTGMA
HQRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVV
DNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMG
NLKHELFETSLLAAAAAAVAPGWQGQEGGGGRRGGGRQGGGGGGGGAPPL
LTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFL
VRNGGGGGGSSGLRGPPHSGGGGGGRSPGGGRSNASAAGGNSGGMASLAS
DGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGGGGGG
GGGGGVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDA
SKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVG
GDAEGGGGGGGGATLPPVIRRPRECGMCFQNSECMLYHRAAEGGD
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mRNA from alignment at Ecto-sp13_S_contig13657:2222..4658+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13657.2884.1 ID=mRNA_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13657:2222..4658+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGACTTCACGAAGTCGATGAAGAACGGTCGGGGCCCGCAAGCAAA CCGCGGGGCCCCCGTCAAGGGGCAGGGGCGTCTCACCAAGTGGGCGCAAA AGCAGCGGGCGACGGTGGACGGGGCACTGGCGGGGGGGGAGGAAACCGCT ATGGTTTCGAGCCATCGTGGTCACCATGGTTCTTCGTCTTTTGTTGCTCC GAGGGCGGGCTCTCCTCGTCTTCGGCGGCGGTGGCGGCCCGCCCTCGTCC ATCGCCGCTTCCTGGTCCTCGAGGTGACCTACGTGTCTGCGAGGAACGGC CGCGGCTGCCTGGAGAAGGTGCTCATGGCTCTCGAGCAGCAGGGCCCCCA AGAGGATACCGATACCGCCCCAGCGGTGGCGGCGGCGGCTGGAGAGGCGG CGACGGTGGACCTCCCGGCGGATGACAGTGGAGAGGGCACCGGTATGGCT CATCAGAGGAAGATCACCCTGGTCGGGGACTGGTACGACTGCGAGGTGGA GCCCGGCGACGGCGTGCACGTTCTTTTCCCGATGCCGGCGGCGGCGGCGG CGGGAGAGGGCTTGGGCATGGAAGAGGAGGCATCGCGGGACGTAGTCGTG GACAACGCTTCCGGGAGGCTCGTGGTCGTCCATCCGGACATCCTGGTGTC GCCGACCAAGGTCGCCGAAACGGTCGCGTGCGCCCGGAAGGCCGTCCTGC AGTCGCGGCTAGCCTCCGACGCTAGCAAGAGCAAGGCTGCCGTCATGGGC AACCTCAAGCACGAGCTCTTCGAGACGTCTCTCCTTGCCGCGGCGGCGGC AGCGGTGGCGCCGGGGTGGCAGGGGCAGGAGGGGGGCGGGGGACGGCGGG GCGGGGGGCGGCAGGGCGGCGGCGGCGGCGGCGGCGGGGCGCCGCCGCTG CTGACGCCCCAGTTCATGGCGGAGCTGGTGGACCGCATCGTGGTGTCGCA GCTGGAGGCCCTGTACGGGGCGGGCTTCGACGAGGACGCAGCGCGCGGCG AGCTGCTGAGCGTGAGCGGGTCGATCCTGGATTGGCACCGGTCGTTCCTC GTGCGGAACGGCGGCGGCGGCGGCGGCAGTAGCGGGCTTCGAGGCCCCCC TCATAGCGGCGGCGGTGGGGGCGGTCGTAGCCCCGGCGGCGGTCGCAGCA ACGCCTCCGCGGCCGGCGGGAACAGCGGTGGAATGGCGAGTCTTGCGTCG GACGGCGCCATGGCGGCGACCGTAGCTGTTTCCCGCGTGCTTGCCACCGA AGATGACGTGTGGAGTCCGGTCCTGGGGCTCAAGGGTATCATGGACGCCA CGGTGGAGGCTGCCGTTGAGCCCCTAGTGGGTGGGGGTGGGGGTGGGGGT GGGGGTGGGGGTGGTGTTGGGGGCGCTCCGTCGTTGGTGATGCCCGTGGA GGTGAAGACTGGGAAGCGGATAGGGGAGGCCAACAGTAGCCATCGTGCCC AGGTATCTCTCAGCTCTGTAGATAGCATCTACCTGTTTTCCGAAGCGCCA TCGAAACGTTTTCAAAACCGCTCTCAGCTAGTCTTTGTGCTTTTGCGCTT CACTTGGTGATGAGATCTCTGGAAACCTAGCAGGTGTGGATATGGAGGGT TTTGCACGTTTTGTTTTTGTCTTCGTCTCAAGTGTGCATATACATCGTTT GTACGACCAAGCTACACCGAGAAGAGGGGTGAAGCCCACACCCTCCGTGA AGGCCGAAAACATTTCCTCGATGGCATCGTCTGCTGTGTTCTGTGCATGC CTCGTGTGGGGGGATGGGCAGGTGATGCTGTACACGCTGCTTCTCCGCAT GAGGTATGGGCACGACGCCTCCAAGAGGGGACTCCTGGTTTACACCGCAG CCGACGGACTGCACACGGGTAAGCTATCCCGCAAAGAAAGTAACGTAACG TATGAACGTACACATACATGAATGGCCTTTTGGAAGCGATTTTTGTGTAC TTCGCCTGAGGTATTTTCATGTGCCACCCACCGTCCATGCTTGCCGTGCA TTCCACCATGCCAAGCATGCTGAACATGCACACCTGGGTGACTTGAAAGA GCGTGTCAGCCAGCGGTGCGTCTGTCTGCGGCAAGACAGTCAATACTACA ATACAAGCACACGCCATGCACGTACACTTCATCCACCCTCTCCCCGTGGC CTTCGCCCCTTCCCCCTCCCCGTTTTCATGCCGCCGTCGGCCTAACCTCA GAGCTCGTATCGCCCGTTGCGGCCGAAATCCGAGCCCTTATCCTCGCACG CAACCGCCTTGCCACGGGCATGAACGAGATCGGACGCGTCGGCCTGGTAG GAGGAGACGCGGAAGGGGGCGGCGGCGGAGGGGGGGGTGCGACCCTGCCC CCCGTGATACGGAGGCCGAGGGAGTGCGGGATGTGCTTCCAGAACTCGGA GTGTATGTTGTACCACCGTGCGGCGGAAGGGGGCGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13657:2222..4658+

>mRNA_Ecto-sp13_S_contig13657.2884.1 ID=mRNA_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1785bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13657:2222..4658+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAAGACTTCACGAAGTCGATGAAGAACGGTCGGGGCCCGCAAGCAAA
CCGCGGGGCCCCCGTCAAGGGGCAGGGGCGTCTCACCAAGTGGGCGCAAA
AGCAGCGGGCGACGGTGGACGGGGCACTGGCGGGGGGGGAGGAAACCGCT
ATGGTTTCGAGCCATCGTGGTCACCATGGTTCTTCGTCTTTTGTTGCTCC
GAGGGCGGGCTCTCCTCGTCTTCGGCGGCGGTGGCGGCCCGCCCTCGTCC
ATCGCCGCTTCCTGGTCCTCGAGGTGACCTACGTGTCTGCGAGGAACGGC
CGCGGCTGCCTGGAGAAGGTGCTCATGGCTCTCGAGCAGCAGGGCCCCCA
AGAGGATACCGATACCGCCCCAGCGGTGGCGGCGGCGGCTGGAGAGGCGG
CGACGGTGGACCTCCCGGCGGATGACAGTGGAGAGGGCACCGGTATGGCT
CATCAGAGGAAGATCACCCTGGTCGGGGACTGGTACGACTGCGAGGTGGA
GCCCGGCGACGGCGTGCACGTTCTTTTCCCGATGCCGGCGGCGGCGGCGG
CGGGAGAGGGCTTGGGCATGGAAGAGGAGGCATCGCGGGACGTAGTCGTG
GACAACGCTTCCGGGAGGCTCGTGGTCGTCCATCCGGACATCCTGGTGTC
GCCGACCAAGGTCGCCGAAACGGTCGCGTGCGCCCGGAAGGCCGTCCTGC
AGTCGCGGCTAGCCTCCGACGCTAGCAAGAGCAAGGCTGCCGTCATGGGC
AACCTCAAGCACGAGCTCTTCGAGACGTCTCTCCTTGCCGCGGCGGCGGC
AGCGGTGGCGCCGGGGTGGCAGGGGCAGGAGGGGGGCGGGGGACGGCGGG
GCGGGGGGCGGCAGGGCGGCGGCGGCGGCGGCGGCGGGGCGCCGCCGCTG
CTGACGCCCCAGTTCATGGCGGAGCTGGTGGACCGCATCGTGGTGTCGCA
GCTGGAGGCCCTGTACGGGGCGGGCTTCGACGAGGACGCAGCGCGCGGCG
AGCTGCTGAGCGTGAGCGGGTCGATCCTGGATTGGCACCGGTCGTTCCTC
GTGCGGAACGGCGGCGGCGGCGGCGGCAGTAGCGGGCTTCGAGGCCCCCC
TCATAGCGGCGGCGGTGGGGGCGGTCGTAGCCCCGGCGGCGGTCGCAGCA
ACGCCTCCGCGGCCGGCGGGAACAGCGGTGGAATGGCGAGTCTTGCGTCG
GACGGCGCCATGGCGGCGACCGTAGCTGTTTCCCGCGTGCTTGCCACCGA
AGATGACGTGTGGAGTCCGGTCCTGGGGCTCAAGGGTATCATGGACGCCA
CGGTGGAGGCTGCCGTTGAGCCCCTAGTGGGTGGGGGTGGGGGTGGGGGT
GGGGGTGGGGGTGGTGTTGGGGGCGCTCCGTCGTTGGTGATGCCCGTGGA
GGTGAAGACTGGGAAGCGGATAGGGGAGGCCAACAGTAGCCATCGTGCCC
AGGTGATGCTGTACACGCTGCTTCTCCGCATGAGGTATGGGCACGACGCC
TCCAAGAGGGGACTCCTGGTTTACACCGCAGCCGACGGACTGCACACGGA
GCTCGTATCGCCCGTTGCGGCCGAAATCCGAGCCCTTATCCTCGCACGCA
ACCGCCTTGCCACGGGCATGAACGAGATCGGACGCGTCGGCCTGGTAGGA
GGAGACGCGGAAGGGGGCGGCGGCGGAGGGGGGGGTGCGACCCTGCCCCC
CGTGATACGGAGGCCGAGGGAGTGCGGGATGTGCTTCCAGAACTCGGAGT
GTATGTTGTACCACCGTGCGGCGGAAGGGGGCGAT
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