mRNA_Ecto-sp13_S_contig13657.2884.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: D7FGT7_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT7_ECTSI) HSP 1 Score: 800 bits (2067), Expect = 2.850e-283 Identity = 500/603 (82.92%), Postives = 507/603 (84.08%), Query Frame = 1
Query: 1 MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETAMVSSHRGHHGSSSFVAPRAGSPRLRRRWRPALVHRRFLVLEVTYVSARNGRGCLEKVLMALEQQGPQEDTDTAPAVAAAA---GEAATVDLPADDSGEGTGMAHQRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLG----MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXX-MASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1785
MEDFTKSMK GRGPQA+RGAP KGQGRLTKWAQ+QRAT DGALAGGEET MVSSH GHHGSSSFVAPRAGSP RRRWRPALVHRRFLVLEVTYVSARNGRGC EKVLMALEQQ QED GEAAT +LPADDSGEG GMA QRKITL+GDWYDCEVEPGDGVHVLFPMPAA MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLA XXXXXXXXXX LLTPQ+MAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXX XXXXX XXXXXXXXXXXXXXX MASL SDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEA VEPLVGG GGAPSLVMPVEVKTGKR GEANS+HRAQVMLYTLLLRMRYGHDAS GLLVYTAADGL TELVSPVAAEIRALILARNRLATGM EIGRVGLVGGDA+GXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD
Sbjct: 1 MEDFTKSMKIGRGPQADRGAPDKGQGRLTKWAQQQRATADGALAGGEETPMVSSHHGHHGSSSFVAPRAGSPSPRRRWRPALVHRRFLVLEVTYVSARNGRGCREKVLMALEQQDSQEDPXXXXXXXXXXXXXGEAATANLPADDSGEGAGMAQQRKITLLGDWYDCEVEPGDGVHVLFPMPAAXXXXXXXXXXXXMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAAXXXXXXXXXXGWQGQGRGGGAPP------------LLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXGLRRSPHSXXXXXXXXXXXXXXXXXXXXXXXGGMASLTSDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGG-----------GGAPSLVMPVEVKTGKRKGEANSTHRAQVMLYTLLLRMRYGHDASTSGLLVYTAADGLRTELVSPVAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 580
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE) HSP 1 Score: 771 bits (1992), Expect = 1.370e-255 Identity = 505/609 (82.92%), Postives = 515/609 (84.56%), Query Frame = 1
Query: 1 MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETAMVSSHRGHHGSSSFVAPRAGSPRLRRRWRPALVHRRFLVLEVTYVSARNGRGCLEKVLMALEQQGPQEDTDTAPAVAAAAG----EAATVDLPADDSGEGTGMAHQRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLG----MEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRN-GXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMAS-----LASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1785
MEDFTKSMKN RGPQA+RG P KGQGRLT+WAQ+QR DGALAG EE A++SS H GSSSFVAPRAGSP RRRWRPALVHRRFLVLEVTYVSARNGR C EKVLMALEQQGPQED DTAP EAATV+LPADD GEG GMA QRKITL+GDWYDCEVEPGD VHVLFPMPA MEEEA+RDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLTPQ+MAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRN GXXXXXXXXXXX R XXXXXXXXXXXXXXXX L SDGAMAATVAV RVLATEDDVWSPVLGLKGIMDATVEA VEPLVG GGAP LVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYG DAS RGLLVYTAADGLHTELVSP AAEIRALILARNRLATGM EIGRVGLVGGDA+GXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD
Sbjct: 520 MEDFTKSMKNDRGPQADRGVPDKGQGRLTEWAQQQRVMADGALAGSEEAAVISSDHDHRGSSSFVAPRAGSPSPRRRWRPALVHRRFLVLEVTYVSARNGRSCREKVLMALEQQGPQEDPDTAPXXXXXXXXXXXEAATVNLPADDHGEGAGMAQQRKITLLGDWYDCEVEPGDRVHVLFPMPAXXXXXXXXXXXXXMEEEATRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------LLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNDGXXXXXXXXXXXSGLRRFAHSGRXXXXXXXXXXXXXXXXXXXXXXXXXXLTSDGAMAATVAVYRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGRGGG--------GGAPLLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGQDASTRGLLVYTAADGLHTELVSPAAAEIRALILARNRLATGMAEIGRVGLVGGDADGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGGD 1112
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: D0NLR3_PHYIT (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NLR3_PHYIT) HSP 1 Score: 152 bits (384), Expect = 5.660e-35 Identity = 138/450 (30.67%), Postives = 192/450 (42.67%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEE---ASRD---VVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAV-EPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
Q + L DWYD VE GD ++++F EG ++ ASR ++VDNA +VVVHPDILVSPT+V + C R+AVLQ LA + SK A +G LKH+LFE +LL L + E RIV + L G +E+ A EL V W + ++ +G VSR+L+TE+ +WS GLKG DA+VE + +P G G A S+V+P+E+KTG + A H+ QV+LYTLLL RY + GLL+Y + T ++ +A +R LI+ RN A+ I +V +GG PP+IR R+C CFQ EC+L+H A E G
Sbjct: 386 QLEAKLSDDWYDVLVEAGDSINIVFTEQDR----EGFFTHDDETPASRQQSRILVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTSKKAFLGTLKHDLFERALL-----------------------------------DGLNDSVALLEEAKRIVDFNILGLVECGLNEEEALFELQRVVEDYRLWVNAAVMGSGTPLNDVPPKAGSKAH----------------------------------------VSRILSTEEMMWSIKWGLKGATDASVEGTIIDPGRGN----------TGPAGSVVLPLELKTGSK-QYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRIAAMATHVRGLIMTRNNFASA---IAKVKAIGGSTSAQ-------VFPPMIRNRRDCERCFQVDECVLHHAATENG 731
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A0W8DK77_PHYNI (DNA replication ATP-dependent helicase/nuclease n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DK77_PHYNI) HSP 1 Score: 148 bits (373), Expect = 1.310e-33 Identity = 136/447 (30.43%), Postives = 190/447 (42.51%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFP---MPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAA-VEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
Q + L DWYD VE GD ++++F + + SR +VVDNA +VVVHPDILVSPT+V + C R+AVLQ LA + +K A +G LKH+LFE +LL L + + E +IV S + L G +E+ EL V W + +G +G+ A V+R+L+TE+ +WS GLKG DA+VE V P GG S+V+P+E+KTG + A H+ QV+LYTLLL RY + GLL+Y + T ++ +A +R LI+ RN A+ I +V +GG PP+IR REC CFQ EC+L+H A E G
Sbjct: 181 QLEAQLSEDWYDVLVEAGDTINIVFTEQDRDGFFSQDNKTPVSRHLSR-IVVDNAHN-VVVVHPDILVSPTRVTTSFGCLRRAVLQETLAVNRPTNKKAFLGTLKHDLFEHALL-----------------------------------NGLNNAEALLEEAKQIVNSNILGLVECGLNEEETLFELQRVIEDYRSWVNGAMAGSGTPLNEIPP-------------------------------------KNGSKAR---VTRILSTEEMMWSIKWGLKGATDASVEGTIVNP--GGKNGERTG--------SVVLPLELKTGSK-KYAGVEHQGQVILYTLLLNERY-RQRCQDGLLIYVPP--IETNRITAMATHVRGLIMTRNNFASA---IAKVKSIGGSTSAQ-------VFPPMIRNRRECERCFQVDECVLHHAATENG 526
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A484E6F4_BRELC (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E6F4_BRELC) HSP 1 Score: 142 bits (357), Expect = 1.440e-31 Identity = 129/443 (29.12%), Postives = 189/443 (42.66%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
Q + L DWY+ V+ GD ++++F + EE + VD A LVVVHPDILVSPT+V + C R+AV+Q LA +K A +G LKHELFE +LL L + + E +IV + + L G +E+ A EL V W + + +G + + + ++ + VSRV++TE+ +WS GLKG DA++E + L G S++ P+E+KTG + A H+ QV+LYTLLL RY + GLLVY + T +S ++ +R L++ARN A+ M +V G A PP+IR+ REC CFQ EC+L+H A E G
Sbjct: 359 QLEAILQDDWYELTVDAGDTINLIFTEQFKEKS------EEGRQEQIWVDKAKN-LVVVHPDILVSPTRVTTSFGCLRRAVVQETLAVAGVMNKKAFLGTLKHELFEFALL-----------------------------------NGLDKTRGLYEAATQIVQTNILGLVECGINEEDAFFELERVIEDFRSWISAAMFGSGT---------------------------------------LLNETTLNNVSKKIHVSRVISTEEMMWSIKWGLKGATDASIEGNIVSL--GKRRSEETE-------SVIFPLELKTGSKKFAA-LEHQGQVILYTLLLNERY-RQRCQDGLLVYVPP--IETNRISVNSSHVRGLVMARNNFASAM---AKVKSFSGSASAQ-------VYPPMIRKRRECERCFQVDECVLHHAATENG 697
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A3PDE1_9STRA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3PDE1_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.720e-31 Identity = 127/447 (28.41%), Postives = 187/447 (41.83%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
Q + L DW+D VE GD ++++F + G + + +SR + VDN +VVVHPDILVSPT+V + C R+AV+Q LA + + A +G LKH+LFE ++ L + + + + RIV S + L G +E+ A EL V W + +G +G+ V VSRVLATE+ +WS GLKG DA+VE + G A S V+P+E+KTG + A H+ QV+LYTLLL RY GLL+Y + T ++ +A +R LI+ARN A+ + ++ +G PP+I+ +C CFQ EC+L+H A E G
Sbjct: 372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAMENG 718
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A4FXC4_9STRA (DNA replication ATP-dependent helicase/nuclease n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FXC4_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.940e-31 Identity = 127/447 (28.41%), Postives = 187/447 (41.83%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
Q + L DW+D VE GD ++++F + G + + +SR + VDN +VVVHPDILVSPT+V + C R+AV+Q LA + + A +G LKH+LFE ++ L + + + + RIV S + L G +E+ A EL V W + +G +G+ V VSRVLATE+ +WS GLKG DA+VE + G A S V+P+E+KTG + A H+ QV+LYTLLL RY GLL+Y + T ++ +A +R LI+ARN A+ + ++ +G PP+I+ +C CFQ EC+L+H A E G
Sbjct: 372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAMENG 718
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: A0A6A3NZH4_9STRA (DNA replication ATP-dependent helicase/nuclease n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NZH4_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.600e-31 Identity = 126/445 (28.31%), Postives = 186/445 (41.80%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAA----AAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAE 1776
Q + L DW+D VE GD ++++F + G + + +SR + VDN +VVVHPDILVSPT+V + C R+AV+Q LA + + A +G LKH+LFE ++ L + + + + RIV S + L G +E+ A EL V W + +G +G+ V VSRVLATE+ +WS GLKG DA+VE + G A S V+P+E+KTG + A H+ QV+LYTLLL RY GLL+Y + T ++ +A +R LI+ARN A+ + ++ +G PP+I+ +C CFQ EC+L+H A E
Sbjct: 372 QLEAVLTEDWFDVHVEAGDTINIVFTEQDRNGLFSQDGNNVLVVPHSSR-IQVDNMHN-VVVVHPDILVSPTRVTTSFGCLRRAVIQETLAVSGTTGEKAFLGTLKHDLFEYAV-----------------------------------RNGLYSAEGLFQEAKRIVHSNILGLVECGLNEEKALLELQRVIEDYRSWVGGAIAGSGTMLNEVPR-------------------------------------KNGSY---VRVSRVLATEEMMWSIKWGLKGATDASVEGTI---------IDPGNTNAGQAGSGVLPLELKTGSK-KYAGVEHQGQVILYTLLLSERYRQQCQD-GLLIYVPP--IETNRITAMATHVRGLIMARNHFASAIAKVKAIG----------SSTSAQVFPPMIQNRTDCERCFQLHECVLHHAAME 716
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: S8AHV7_DACHA (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AHV7_DACHA) HSP 1 Score: 133 bits (335), Expect = 8.600e-29 Identity = 114/443 (25.73%), Postives = 180/443 (40.63%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
+R++ L W DC+V GD V+V+ ++E ++DN L ++HPDIL+S T VA++ C R A L+ R+ + + S+ +V GN+ HELF+ +L A + F+ + ++RI+ +Q++ LY A L + + +W +SF+ R+P + +A+ +VL E+ +WSP GLKG MD TVE ++ L G +L P+E+KTG+ N +HRAQ MLYTLL+ RY + S G+L YT T + + E+R L++ RN LA LPP+++ R CG C+ + C +YHR E G
Sbjct: 613 ERRVLLRQSWMDCDVREGDVVNVIGAF------------DDETC---IIDNTQNML-ILHPDILLSATAVADSFDCIRLATLKERVKAISDASEWSVYGNILHELFQAALSAND-----------------------------------FSSAFLEKEINRILSAQMQNLYAVRVTPGTAMDHLRTKLPPLQEWAKSFVSAR------------PQHDAIAKGHRAPD--------------------------SNLAIRKVLDVEEHIWSPKFGLKGNMDVTVEIEIQDLKGSR--------------TLTAPLELKTGRNT--KNMTHRAQTMLYTLLMSDRYDIE-SLCGILYYTETS--ETLRIPNLTDELRGLMIGRNHLAR-------------------FIYSKLDLPPMLQDKRTCGRCYAKTSCFVYHRTMENG 928
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Match: W7HXZ1_9PEZI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HXZ1_9PEZI) HSP 1 Score: 130 bits (328), Expect = 6.380e-28 Identity = 116/450 (25.78%), Postives = 184/450 (40.89%), Query Frame = 1
Query: 454 QRKITLVGDWYDCEVEPGDGVHVLFPMPAAAAAGEGLGMEEEASRDVVVDNASGRLVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTPQFMAELVDRIVVSQLEALYGAGFDEDAARGELLSVSGSILDWHRSFLVRNGXXXXXXXXXXXXXXXXXXXXXRSPXXXXXXXXXXXXXXXXMASLASDGAMA-------ATVAVSRVLATEDDVWSPVLGLKGIMDATVEAAVEPLVGGXXXXXXXXXXVGGAPSLVMPVEVKTGKRIGEANSSHRAQVMLYTLLLRMRYGHDASKRGLLVYTAADGLHTELVSPVAAEIRALILARNRLATGMNEIGRVGLVGGDAEGXXXXXXXXTLPPVIRRPRECGMCFQNSECMLYHRAAEGG 1782
+R++ L W +C+V GD V+V+ + ++ ++DN L ++HPDIL+S T VA++ C R A L+ R+ + + ++ +V GN+ HELF+T+L A + F+ + V+RI+ +QL+ LY A L + + DW + F+ ++ DGA+A A +A+ +VL E+ +WSP GLKG +D TVE V+ V G +L +P+E+KTG+ SHRAQ MLYTLL+ RY + S G+L Y T + + E+R L++ RNRLA LPP++ R CG C+ + C ++H+A E G
Sbjct: 604 ERRVLLRQAWVECDVREGDVVNVIGSF--------------DGTQTCIIDNTQNML-ILHPDILLSATAVADSFDCVRLATLKERVKAISDGNQWSVYGNILHELFQTALSAND-----------------------------------FSSAFLEKDVNRILSAQLQNLYAIRVTPSMAVDHLRTKIPMLQDWTKKFV---------------------------------------------SAQPKDGAVATGHRGPDANIAIRKVLDVEEHIWSPKFGLKGNIDVTVEVGVQD--------------VKGKSTLTVPLELKTGRNTKVM--SHRAQTMLYTLLMSDRYDVE-SLCGVLYYLETS--ETIRIPNLMDELRDLMVGRNRLAR-------------------YIYSNIDLPPMLGDKRTCGKCYAKTSCFVFHKATENG 920 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13657.2884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13657.2884.1 >prot_Ecto-sp13_S_contig13657.2884.1 ID=prot_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=595bp MEDFTKSMKNGRGPQANRGAPVKGQGRLTKWAQKQRATVDGALAGGEETAback to top mRNA from alignment at Ecto-sp13_S_contig13657:2222..4658+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13657.2884.1 ID=mRNA_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13657:2222..4658+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13657:2222..4658+ >mRNA_Ecto-sp13_S_contig13657.2884.1 ID=mRNA_Ecto-sp13_S_contig13657.2884.1|Name=mRNA_Ecto-sp13_S_contig13657.2884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1785bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13657:2222..4658+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |