mRNA_Ecto-sp13_S_contig13650.2880.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A6H5KLT5_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLT5_9PHAE) HSP 1 Score: 172 bits (437), Expect = 4.410e-52 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSVARPAEGDY 252
QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKS+TSV RPAEGDY
Sbjct: 199 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSATSVPRPAEGDY 282
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A1V5XKF9_9DELT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5XKF9_9DELT) HSP 1 Score: 120 bits (301), Expect = 5.670e-32 Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSST 222
Q+FINFGDN+ LD GFSP G+V+ GMDV D+LYKGYGEGAP G+GP QG++Q QGN+YLK SFPKL YIK++T
Sbjct: 173 QMFINFGDNSRLDSQGFSPFGKVITGMDVVDKLYKGYGEGAPVGDGPEQGRLQFQGNSYLKSSFPKLDYIKTAT 246
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A5C5X4P5_9PLAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X4P5_9PLAN) HSP 1 Score: 117 bits (294), Expect = 4.240e-31 Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSV 228
QLFINFGDN+FLD GFSP G VV GM+V D LY YGEGAP G GPNQG+IQ +GNAYL FPKL YIKS+T V
Sbjct: 156 QLFINFGDNSFLDNQGFSPFGEVVEGMEVVDSLYAEYGEGAPSGRGPNQGRIQQEGNAYLNEKFPKLDYIKSATIV 231
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A517QVD7_9PLAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QVD7_9PLAN) HSP 1 Score: 115 bits (288), Expect = 7.560e-31 Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSV 228
Q+FINFGDN+FLD GF+P G+V GM+V D LY GYGEGAPQG GP QG++QS+GN YLK FP+L YIK +T V
Sbjct: 98 QVFINFGDNSFLDNQGFAPFGKVTEGMEVVDALYAGYGEGAPQGRGPGQGQVQSKGNEYLKADFPELDYIKQATVV 173
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A3E1EN89_9BACT (Peptidylprolyl isomerase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EN89_9BACT) HSP 1 Score: 117 bits (292), Expect = 8.260e-31 Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSV 228
Q FINFGDNT LD GFSP G++ GMDV D++YKGYGEGAP+GNGP+Q + QS+GNAY K FPKL YIKS+T V
Sbjct: 155 QFFINFGDNTQLDTMGFSPFGKITEGMDVVDKIYKGYGEGAPRGNGPDQMRAQSEGNAYFKKEFPKLDYIKSATLV 230
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A7S2CBJ7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBJ7_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.950e-30 Identity = 51/74 (68.92%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSST 222
Q+F N+GDN FLD+ GFSP G V GMD+ ++LY GYGEGAP G GPNQGKIQ GNAYLK SFPKLSYIK ++
Sbjct: 194 QIFFNYGDNQFLDRQGFSPFGTVKSGMDIVEKLYSGYGEGAPSGKGPNQGKIQKDGNAYLKESFPKLSYIKKAS 267
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A522Z3T8_9BACT (Peptidylprolyl isomerase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A522Z3T8_9BACT) HSP 1 Score: 111 bits (277), Expect = 5.900e-30 Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSST 222
Q FINF DN+ LD GF+P G+VV GMDV D+L K YGEGAP+GNGP+QG+IQS+GN YLK FP+L YIKS++
Sbjct: 35 QFFINFKDNSMLDSMGFTPFGKVVAGMDVVDKLNKEYGEGAPRGNGPDQGRIQSEGNTYLKKDFPRLDYIKSAS 108
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A838IBD0_9DELT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IBD0_9DELT) HSP 1 Score: 113 bits (283), Expect = 6.120e-30 Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSV 228
QLFINFG N LD GF+P+G+VV GMDV + LY GYGEGAPQG GP+QG++Q++GN YLK SFP+L YIKS T V
Sbjct: 111 QLFINFGQNAGLDPQGFAPLGKVVEGMDVVNSLYAGYGEGAPQGRGPSQGRMQAEGNTYLKSSFPELDYIKSVTIV 186
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A7S2RJE7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJE7_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.710e-30 Identity = 52/76 (68.42%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKSSTSV 228
Q+FINF DN FLD+SGFSP V GMD+ ++LY GYGEGAP GNGPNQG IQS+GNAYL S+PKLS+IKS+ V
Sbjct: 209 QVFINFKDNKFLDRSGFSPFAEVTSGMDIVEKLYSGYGEGAPNGNGPNQGLIQSKGNAYLSASYPKLSFIKSAKVV 284
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Match: A0A539EH08_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A539EH08_9BACT) HSP 1 Score: 114 bits (286), Expect = 8.740e-30 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGKIQSQGNAYLKGSFPKLSYIKS 216
Q FINF DN LD GF+P G+VV+GMDV D+LYKGYGEGAPQG GP+QG++Q++GNAYLK FPKL YI S
Sbjct: 167 QFFINFKDNGMLDSMGFTPFGKVVLGMDVVDKLYKGYGEGAPQGGGPDQGRVQAEGNAYLKKDFPKLDYITS 238 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13650.2880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13650.2880.1 >prot_Ecto-sp13_S_contig13650.2880.1 ID=prot_Ecto-sp13_S_contig13650.2880.1|Name=mRNA_Ecto-sp13_S_contig13650.2880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp QLFINFGDNTFLDKSGFSPIGRVVVGMDVADRLYKGYGEGAPQGNGPNQGback to top mRNA from alignment at Ecto-sp13_S_contig13650:467..1344+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13650.2880.1 ID=mRNA_Ecto-sp13_S_contig13650.2880.1|Name=mRNA_Ecto-sp13_S_contig13650.2880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=878bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13650:467..1344+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13650:467..1344+ >mRNA_Ecto-sp13_S_contig13650.2880.1 ID=mRNA_Ecto-sp13_S_contig13650.2880.1|Name=mRNA_Ecto-sp13_S_contig13650.2880.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13650:467..1344+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |