mRNA_Ecto-sp13_S_contig13649.2878.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: D8LG95_ECTSI (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI) HSP 1 Score: 635 bits (1639), Expect = 2.490e-221 Identity = 310/316 (98.10%), Postives = 311/316 (98.42%), Query Frame = 1
Query: 1 QDNWRDNVMTLTLLEGAWATVPEGGVTPIKIMSIDTGAGTVSFPSGVQIANVREDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVADGTCTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA 948
QDNWRDNVMTL+LLEGAWATVPEG VTPIKIMSIDTGAGTVS PSGVQIANVREDS TNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFV DGTCTNTCQHARDGYCDDPRASGVC XXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA
Sbjct: 582 QDNWRDNVMTLSLLEGAWATVPEGEVTPIKIMSIDTGAGTVSLPSGVQIANVREDSSTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVDDGTCTNTCQHARDGYCDDPRASGVCPXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA 897
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: A0A835YLV2_9STRA (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.480e-55 Identity = 137/313 (43.77%), Postives = 175/313 (55.91%), Query Frame = 1
Query: 7 NWRDNVMTLTLLEG-AWATVPEGGVTPIKIMSIDTGAGTVSFPSG-VQIANVREDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGY-DDDANSFLG--TNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVADGTCTNTC-QHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTL------TTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAG 909
NW + L L EG +WA + +K+ IDTGAG V+ P+G V + V DS +CED+C + ADG CDEP S+ G +G+ + WGY DDDAN ++ Y+G + Y YG DD GF G++PCD GTDCTDCGV DG CTNTC + ARDG+CDD R G C XXXXXXX P G + NFT + + +W+ DD L +DD L GQ NA+ Y+R + DHE H E G G IF+DVLWA+V+LVG ++SLG CMVAYR K+G
Sbjct: 589 NWTPTSIQLLLNEGKSWAKLSGAETASLKVSKIDTGAGLVTLPNGGVHVVTVHADSNEVICEDTCVYPADGTCDEP-------SAKTGGVLGTNHGK----------WGYSDDDANFHSAGYSSSYAGQHGYLA-----SSYGS--DDLGF--GIAPCDPGTDCTDCGVHLPDDGFCTNTCLKMARDGWCDDTRGGGTCLLXXXXXXXGPVG--HDNFTNGAWGAGSAYGSGENWYTDDSSNFLLDDDWALEGQAANAKPIYQRTFQDHESRHNEMEGEGGIFMDVLWAIVILVGGTVSLGFCMVAYRRLKSG 873
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: A0A6H5JWG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG4_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.730e-42 Identity = 111/298 (37.25%), Postives = 111/298 (37.25%), Query Frame = 1
Query: 616 PWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA 948
PWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHK EAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA
Sbjct: 556 PWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKNATTMKGISSWERNNKTXIPGIDFHHSSSACPSAASIRTMIAVATEKGKKLSHWDVKHAYIHAKLKEEIPQVPGRLWVDPFVFRKVVEGEVVGLIVIYVDDILVAADEGAREELFASLNKKFPAKNLGECTWYDGRAIAMDVEIVNTKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPVQAA 853
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI) HSP 1 Score: 148 bits (374), Expect = 2.850e-36 Identity = 121/300 (40.33%), Postives = 154/300 (51.33%), Query Frame = 1
Query: 1 QDNWRDNVMTLTLLE--GA-WATVPEGGVT-PIKIMSIDTGAGTVSFPSG-VQIANVREDSLTNLCEDSCSFAADGQCDEP--GVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVADGTCTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDD--DDWEMLWNDDG--VLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMS 867
+ W D +T++L GA WA V T +K++S+DTG G V P G + IA VR+D T CEDSC +A DGQCDE GV + +N++ G D S T+ SG Y G G DD N S C +GTDCTDCG++ DG CTNTC+ ARDG CDD RA G+C XXXXXX PW SNFT Y +S F D DD L ND +L GQ N +KR + H + KE+ A +F++ LWA +VLVGCS++
Sbjct: 550 EQGWTDETVTISLSTDPGAMWANVRADDKTVEVKVVSVDTGGGEVFMPGGGIVIAEVRKDDATFNCEDSCVYANDGQCDEDRDGV------------------EAVNWS----GAMTDSIGESESFTSQASGSRGYLGSSAMP---GEDSDDLVLVNSPS-CPLGTDCTDCGLELAEDGRCTNTCRFARDGVCDDRRAVGLCADGXXXXXXGPWDQ--SNFTEVVEYATS--FSDAYDDDGFLANDANHPILDGQTGNGIGRFKRVFVKHNSIRKESDKAEGVFMETLWAAIVLVGCSVT 819
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: A0A6U1PF74_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PF74_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.180e-28 Identity = 114/327 (34.86%), Postives = 165/327 (50.46%), Query Frame = 1
Query: 16 DNVMTLTLLEGA-WATVPEGGVTPIKIMSIDTGAGTVSFPSGVQIANVR------EDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYR------YAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVADGT-CTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAP----YKRDWNDHEVLHKEAPGAG-TIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGGGGAPMYLPV 939
+ ++ L L EG WA VP G PIK++SID+GAG + VQIA + ED+ C+DSC +A DG+CD+P +D +++ G WG DDD + D S +Y YAG Y YYG N ++ CD GTDCTDCG V + T C NTC+ +RD YCDDPR + + XXXXXXXXXX NFT + ++WFDDDD D Y ++++A+A K D L + G+G + F+ ++ A+ ++G + + G ++ +R ++G + YLPV
Sbjct: 63 EKLVLLGLKEGKKWADVPAGETVPIKVVSIDSGAGEEQYNPPVQIAVAQADPSEDEDAHPGQCDDSCIYAFDGECDDPE------------------NDHVDH---GFEWGEDDD---YFYDYDDSDLYXXXXXFYYAG--GGYGYYGYDT-----LNYIAACDPGTDCTDCGGFGVTEATECDNTCRFSRDDYCDDPRGNDLXXXXXXXXXXXXXXX--DNFTA---HWDTTWFDDDDDYFYMPGDYEPY-EDLDAEAASAAVVKSVQPDSSELPADDVGSGGSSFMSIITAVACVIGAGVIVAGAVLGFRQLRSGQ--SLPYLPV 350
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: A0A835YHY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHY7_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.880e-20 Identity = 98/299 (32.78%), Postives = 127/299 (42.47%), Query Frame = 1
Query: 109 GAGTVSFPSG-VQIANVREDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCGVKFVADGTCTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTL----------------------------TTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRD--WNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFKAGG 912
GAG V P G V +A V+ D+ C+DSC+FA D C E G+A G + D + A G ++ + C+VGTDCTDC + V DGTC NTC+HARD CDD R G XXXXXXXXX G SNFT + S SW +D + + VL GQE NA P+ R H+ L +EA GA +F D LW +V+LVG + S +AYR+++ GG
Sbjct: 841 GAGEVVLPDGGVLVACVQPDNPNVRCDDSCTFANDNICHEEGLA------------GKLFYDAWH-------------AAKHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXAWYKA-AVCEVGTDCTDCNIPVVVDGTCANTCKHARDDQCDDEREGGQGLXXXXXXXXXXGPVGASNFTADSRKGGVFDGLSSGQWGRDSASMSQLQGVSAASSQSWQED---STFFRGNDVLKGQEGNAAPPFFRHAFTKRHKQLTREAEGAEVLFEDALWGVVLLVGGTASALILYLAYRNYRRGG 1110
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: F0XWD0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWD0_AURAN) HSP 1 Score: 88.6 bits (218), Expect = 8.580e-16 Identity = 96/311 (30.87%), Postives = 134/311 (43.09%), Query Frame = 1
Query: 25 MTLTLLEG-AWATVPEGGVTPIKIM--SIDTGAGTVSFPS-GVQIANVREDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFFNGMSPCDVGTDCTDCG---VKFVADGTCTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGDGNSNFTLTTFYQSSSWFDD-----------DDWEMLWNDDGVLYGQEMNAQAPYKRDWNDHEVLHKEAPGAGTIFVDVLWAMVVLVGCSMSLGGCMVAYRHFK 903
M L L +G +WA + E +P+ + +DTGAG V G IA V D +C+DSC +A DG CD+ GS G + D +DY G Y Y F + C+ GTDCTDCG + + C+N CQ A DGYCDD R SG XXXXXXXXXXP +GN T + W+DD ++++ L ++ V + + K D +E+ G G IF+ +L +VV +GC M G A++ +K
Sbjct: 402 MVLLLKDGKSWAPLGESS-SPVSVYVTKVDTGAGEVVMEDDGAVIARVYPDPSGAVCDDSCEWALDGVCDD------------GSSQGRTWFD-----------------------DDYGGFYAYDXXXXXXXXXXXXXXXXXFLAPV--CEAGTDCTDCGGLDPEAPSGVDCSNACQWANDGYCDDTRTSGXXXXXXXXXXXXPASEGNF-----TTWDDDGWWDDXXXXXXXXYDFENYDALDDEPHVAFIKSTPNPKTKKSDM-------QESKGVGGIFMMLLEGVVVGIGCVMCAVGSWFAHKFYK 662
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Match: A0A7S3NKQ2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.620e-12 Identity = 88/260 (33.85%), Postives = 112/260 (43.08%), Query Frame = 1
Query: 85 IKIMSIDTGAGTVSFPSGVQIANVREDSLTNLCEDSCSFAADGQCDEPGVAFGTSSSYGGSYMGSYYSDMLNYNPYGLGWGYDDDANSFLGTNDYSGMYRYAGYDTTYQYYGMTLDDDGFF-------------------NGMSP--CDVGTDCTDCGVKFVADGT--------CTNTCQHARDGYCDDPRASGVCXXXXXXXXXXPWGD-GNSNFTLTTFYQSSSWFDDDDWEMLWNDDGVLYGQEMNAQAPYKRDWND 774
+K++ IDTGAG V F IA V + + C+DSC +A DG CD+ GT Y+G D P +AN + +DY G+YR D YG DD G++ GM+ C GTDCTDC + DG C+NTC+ ARDGYCDD R G+ XXXXXX G G SNFT FDD+ W+DDG Y + +W D
Sbjct: 653 LKVIEIDTGAGGVIFEKNNVIATVVNEPDGDFCDDSCEWANDGVCDD-----GTQ-----PYIGDT-DDSTPRRP---------NANRY--DDDYGGLYR----DDDDDIYGYGEDDYGYYADRGXXXXXXXXXXXXXXXTGMNTAACAPGTDCTDCQPR-AGDGRLDEPKEEMCSNTCEFARDGYCDDGR-DGLPMYCPXXXXXXXXGPVGASNFTK---------FDDE----FWDDDGDNYYFTXXXXXXXEENWKD 871 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13649.2878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13649.2878.1 >prot_Ecto-sp13_S_contig13649.2878.1 ID=prot_Ecto-sp13_S_contig13649.2878.1|Name=mRNA_Ecto-sp13_S_contig13649.2878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp MTLTLLEGAWATVPEGGVTPIKIMSIDTGAGTVSFPSGVQIANVREDSLTback to top mRNA from alignment at Ecto-sp13_S_contig13649:437..4618+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13649.2878.1 ID=mRNA_Ecto-sp13_S_contig13649.2878.1|Name=mRNA_Ecto-sp13_S_contig13649.2878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13649:437..4618+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13649:437..4618+ >mRNA_Ecto-sp13_S_contig13649.2878.1 ID=mRNA_Ecto-sp13_S_contig13649.2878.1|Name=mRNA_Ecto-sp13_S_contig13649.2878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13649:437..4618+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |