Homology
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match:
A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)
HSP 1 Score: 657 bits (1696), Expect = 7.980e-226
Identity = 438/482 (90.87%), Postives = 446/482 (92.53%), Query Frame = 1
Query: 319 MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGARLRPGRWLLSAWRKTADQFRSNMRWGSLSYIARAWEEQSTTTDICSAAEGSAKADSSTCSNNNEAIHGPENAGGTNATNSATVASFLRRRAPRGLAFALVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRDVAERADDTRPGLAKRSGEDADGEHAVGGESVGGKEEEMDGRMDVGEEGTRKGTSERDEPGPTACPSPEHDREGNDGGKATHAIVRTDGRQQGDVSSDRTIQGGGQPGHSAEEQDSAIARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRATTTPTKPRAEKLRATSKATGPTQAARRKSKDSPRGTSSLKLTPTRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 1764
MQWSKRATPAT ASASKPSSAGKRE W RVLESAKWELGSEPR QQTG RLR GRWLLSAWRKTA QFRSNMRWGSLSYIARAWEEQSTTTDICSAA+G AKADSSTCSNNNEAI GPENAGGT+ATN A VASFLRRRAP+GLAFALVVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DTRDVAERA+DTRPGLAKRS ED DGEHAVGG+SVGGKEEEMDGRMDVGEEGTRKGTSE DEPGPTACPSPEHDREGND GK THA VRTDG+QQ DVSSD IQGGGQP HSAEEQDSA+ARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRA TTPTKPRA KLRATSKATGP QAARRKSKDSPRGT SLKLT +RMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLT RALERDPSALSEIAKDASLQQG DK
Sbjct: 1 MQWSKRATPATTASASKPSSAGKREGWSRVLESAKWELGSEPRDQQTGTRLRSGRWLLSAWRKTAHQFRSNMRWGSLSYIARAWEEQSTTTDICSAADGRAKADSSTCSNNNEAIQGPENAGGTDATNPAVVASFLRRRAPQGLAFALVVATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DTRDVAERANDTRPGLAKRSDEDVDGEHAVGGKSVGGKEEEMDGRMDVGEEGTRKGTSEHDEPGPTACPSPEHDREGNDVGKVTHAGVRTDGQQQDDVSSDGAIQGGGQPSHSAEEQDSALARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGGDK 480
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match:
D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)
HSP 1 Score: 107 bits (266), Expect = 2.300e-24
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 1
Query: 1585 MTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 1764
MTS SRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQG DK
Sbjct: 1 MTSVSRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 7.98e-226 / Id = 90.87 Expect = 2.30e-24 / Id = 96.67 Sequence A0A6H5JAH0_9PHAE D8LIF2_ECTSI
Match Name E-value Identity Description
A0A6H5JAH0_9PHAE 7.980e-226 90.87 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D8LIF2_ECTSI 2.300e-24 96.67 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 2980 Hectar predicted targeting category other localisation Exons 3 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-18_003880.1 Cds size 1449
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462520.1265185-UTR-Ecto-sp13_S_contig1028:137..1350 1681462520.1265185-UTR-Ecto-sp13_S_contig1028:137..1350 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig1028 138..1350 - 1681462520.1580422-UTR-Ecto-sp13_S_contig1028:4910..5228 1681462520.1580422-UTR-Ecto-sp13_S_contig1028:4910..5228 Ectocarpus species13 EcNAP12_S_4_19m UTR Ecto-sp13_S_contig1028 4911..5228 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462520.1354263-CDS-Ecto-sp13_S_contig1028:1350..2500 1681462520.1354263-CDS-Ecto-sp13_S_contig1028:1350..2500 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1028 1351..2500 - 1681462520.143122-CDS-Ecto-sp13_S_contig1028:3982..4080 1681462520.143122-CDS-Ecto-sp13_S_contig1028:3982..4080 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1028 3983..4080 - 1681462520.150666-CDS-Ecto-sp13_S_contig1028:4709..4910 1681462520.150666-CDS-Ecto-sp13_S_contig1028:4709..4910 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig1028 4710..4910 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1028.287.1
>prot_Ecto-sp13_S_contig1028.287.1 ID=prot_Ecto-sp13_S_contig1028.287.1|Name=mRNA_Ecto-sp13_S_contig1028.287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp
MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGAR back to top mRNA from alignment at Ecto-sp13_S_contig1028:138..5228-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1028.287.1 ID=mRNA_Ecto-sp13_S_contig1028.287.1|Name=mRNA_Ecto-sp13_S_contig1028.287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5091bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1028:138..5228- (Ectocarpus species13 EcNAP12_S_4_19m)CATCGAAGTTCAAGTCTGCGACGTTGTACAGAAGAAGTGTAGTAAAAATT
CCGAAGTAGTCTTGTGTTACAGGACGACAGCAGGTATCGCCGGAAGGGTG
TTTACACAAGACACCCTAACGATCGATCACGGAGAGAGAGGCAAAACACC
GAAGGCTGTAGCGTGAGTTGGATCTCCCTGTTCTTGATCGAGTGAGTGCG
TGAAGGGTCACTGCTTTCTGCTGTGGATCATTTCATCACCTACTGCTATA
CTACCGCTGTCGCTCCTAAGGTAATGAGCGAGCCGAGATCTTCCTCCGAT
TGATTACGGTGGTGCCGT ATGCAATGGAGCAAGCGAGCAACCCCGGCAAC
ACCAGCGTCCGCATCAAAGCCGAGCTCTGCTGGAAAGAGGGAGCGCTGGT
GGCGGGTGCTAGAGTCAGCCAAGTGGGAATTAGGGAGCGAGCCGCGTCAC
CAACAAACAGGGGCGAGGCTCAGGCCTGGCAGGTGGCTGTTGTCGGCGTG
GAGAAAAACTGCCGATCAG GTCAGGTGATGATGCAAGAAGAGCGAGTTTT
TAGAGAGGATGTACCGCCGTTGCACAGAGGTGCTGTGCAACGGGCGCTTT
CCTGACGAAGATTGATAAAAGATAGAGGCAGATGCACGTACAGCAGGTGC
GTAGCATGTGCTTCCCGGTTGCGCATCACACAGCACGCCCATCGAGGTAG
ACAGCTCACCAACAAGGCATTTTGAGGCGGGTGGCACTATTTCCTACACA
CGCCCATATCAGCGGCCGTTTTTTTTTTTTTGAAGGTAGACTCGTGTAAC
AGCTATATGCACGTTTTTTTCACTCAGAGATAACCAGCCGGTAAAGATAC
GATGCGCGGCGCGTCGCAACTTGTGTTGTCATCAGAGGTTGGCTCCCGAC
CTCGAGACGCAGCACACCACTTTCAACATATACTATGGAATCGCCAACCT
CCTACGTATTCAACCTCATCAGGGGCACAGCCACGGTGCGAAATGACCAA
CCTGTGTCCCTCTTTTCATTCTATAATGCATGCATGCTACGTATGTGCAT
GTTACTTCTTGAACTAATTGTTGGTCCGTTACCGCAGTCTGATTGGATGG
TTGCGGTCCCCCTTTGACTTCCGTGACGACCAATGACAACGATTGTAGTT
CCGGTCGAACATGAGATGGGGGAGCTTGAGCTACATTGCACGGGCATGGG
AGGAGCAGTCGACAACGACAGACATCTGCAGTGCGGCAGAGGGCAG GTAT
GCATTGCTTTGTTTTTGTACTGTAGCTTGGAGCATCTTCTTTGTGCGGCT
CCGGACAAGCATATCAATCTTTCCTGGATCTTTGCTGTTCATGCAACAGA
GCTAGTCAGTTGGTCTGTGGTAAATATGTACCTGAGAGCGATGTTTTACT
TGTATTTTGTTTCCGCGTTTACATCCCTACATGCGCGGGGCTATATAGCA
GTAGAGGCCGTCAAGTTTGGCCGAGGGTTGTTTTATTTCACTATGTCGGA
TTTATGTATCAGAATAGAGCCAGCGTCAATACCCCTATTCTGGACCTCCT
TCACCAGGCTCACAAGTGGTGCTCAAGTTCCTGTAGATAATGATTTTTTC
GAGGCTCAATTTCTTGACAGCCAAGTTATTTAGTGCGGGCGCACCCTATT
TTTTCCATACATTTATATTCGTTGTGACGCGACCACTCAATGTTGTCGAG
AGCGGAGTCAACGACTCATCAAACTTTCAGGCCGATAGCAGCCGAGCCGA
CACAATCAATTCCTGCAGCTCTTTGTCCGATGGCTATGCGTCGTAGTTCG
AAGTCCAGTTTGATCGAACTGACGTCGATCCCTCTGCTGACCAAACAACG
AAGACGAGAGACCCCATTCAACACATTTTGACGGCACGAACGCCACGAGA
AAACTGAAGAGAAATCGCTTGAAAAACTACCACAAAGGACCTTCCACCCC
GAAGCACGGGACTAGGCGGCGTGTGTTCTTGCCCTTACGGCTACGGCTCA
CTCGTAGTGCGGCAGAAGCAAAGATGCCCACAAAATCATAGGAGGTTGAT
CGCAGAAACTGCCCGGCAAGAGTCAGGTTAGGCCAACCAAAAGGTTCGGG
CAATTCGCCATTGTTTGCCATGTGCTCTCCTCCGCCACATTATGTACGTC
GCAGAGTGCAGCTCCACGGAGTTTGTCGCCGCAAACGCAACAAGGATGAA
TCATGACAAGAAACATGAAACATGCCCCCAAAAGGTCTCGAGTGCCCCTT
TTGCTTCAGTTAGTTTCATGTCTAGGCACATCGTTCTAGTTTGGATTTAG
CGTAAGATCATTGCTACTGCTGTTAATGAAACGTTCATTGACCACTATAC
CTCTGTACATCAGAAAGATGGTAAGTCTTTCTGCCCGTGTGGTGGAGGAG
TGTGTTCTCGACGGCACGATTCAAAAAATGATTTCGCATCCGTAGAGGGC
GGGAAAACTTAAGGTAGCGCAAAGCTCTGTGCTGAAGGAGTTCTTTCACC
CAAGACTCTTCGCAACTTTAGTTTTGAGGGCAGGAAAGGGAGAGCCGTGT
GTGCACACGCGTACCACTATGATGGTTCTTACTTTTCTCTTTCGTGCAGG
CTGGTGGAGGCTACTGCACATCTAACGGCATCCCCTCGCCCCCAACGCCG
CCTTGATGCTTTCCTTCCCGTGGCCCTTGAACTTGGATGAACTTATTTTC
GGGGGCACTCATGGTTGTTTCGCTGGAGTGCGAAGGCGGACTCAAGCACA
TGCAGCAACAACAACGAAGCTATTCACGGTCCGGAGAATGCCGGAGGCAC
CAATGCCACCAACTCTGCAACGGTCGCTTCCTTTCTCCGCAGGAGGGCCC
CTCGAGGTCTCGCTTTTGCCCTAGTGGTTGCAGCGGTGTATGTGGTTTAT
AGGAGGAGGCGTCGCAGGCCGGGGGGACGCCCGCGTTCTCGGCGCCAGTT
GGGCGAAAGGCGTAGTGATGTCGCGGCCGCAGCGGCTAGACAATGGTGGT
GGCAACGCGCTGGTGGGAATGGCCAGGAGGCGGAACGCAAGGATGATGGC
GGCGGGAGTAGCAGTGATGGTGGTGGTGGCGACACCCGTGATGTGGCGGA
GAGAGCCGACGACACAAGGCCTGGGCTTGCAAAACGGTCTGGTGAGGACG
CAGATGGCGAACATGCCGTTGGTGGGGAAAGTGTTGGCGGTAAGGAGGAG
GAGATGGATGGTCGAATGGACGTTGGTGAAGAGGGAACTCGTAAAGGTAC
CTCCGAACGTGACGAGCCAGGACCTACCGCGTGCCCAAGCCCTGAGCACG
ACCGGGAGGGAAACGATGGCGGGAAGGCTACTCATGCGATTGTTCGCACA
GACGGTCGGCAACAGGGCGACGTGTCGTCTGATAGGACTATTCAGGGAGG
GGGACAACCTGGTCACTCGGCGGAAGAGCAAGACTCAGCAATAGCGAGAA
TGAGCCGAGGACAGTCCTTGTTATCCGAAAGCAGCACCGAGGACATCCTT
GCCGAGGCCGATCACCTGATCGCCGATGCCGCCAACAACACCTTCAACAG
CATTCGTGCTACGACAACGCCTACCAAACCGAGAGCGGAGAAACTCCGCG
CCACGAGCAAAGCAACCGGCCCCACTCAGGCTGCTCGCAGAAAGTCGAAA
GACTCTCCCCGCGGCACCTCTAGTCTCAAGCTGACCCCTACGCGCATGAC
CAGTGCGAGCCGGTCGAGTGATACCCGCAGCCCGAAACGCCCGCGCGTGT
ACCCAGAGGTTTCCGGCGAAGAAGTCGATGCGCTCGTAAGCCTGACGCAA
AGGGCGCTTGAGCGGGACCCCTCGGCTCTGAGCGAGATTGCCAAGGACGC
GTCCCTTCAGCAAGGCCGTGATAAGTGA CGCAATGTCCGATGGTGAGCTA
CATACTAGACAGCAGGAAACGCCTCCAGCGTGTGGGGCGGTGGGTAGGTA
GTGGGCGGTTGGCTACGTCTTCTCGGGCCTCCGGTTTCGCGAGCTTCTGG
CATTTTGGGATACTCGCGTCGGAGCGGTTCTGAATAGGCCTGCGGTGTAA
CGGTAGCTAAAGCACTCTTAGATGACACGAAACTGGTTGGGCTGCCGCAC
CCTTCGGCATGTTGCTGTTAAGAGCTTGGTTTACGGCTTACAGCACGTGC
ACTTGTATCAAAACCTACATTTTTCTATCATAGATGCATTTTTGGAATGT
GTGAAGCATGTTCGTAGACGTTTGAACAGCCGGGTGTCTCAACTTTCATA
TCTGTTGCGTGCGTGGTTGCACTCTGAGACATGCATGCACCTTGACTGAG
GTTTGCAGCAATCCCCTGACTTCTTCGTGAGGCTCGTTGTTTTCCTCTTT
CGGTAGGTAGCGTTATGAACCGTAGGTCATCACAATTTGCGCTCCAGCTC
TCGCGGTATGAAGAAACCGAGGTCTGTGGTCCTCACGGTCAACTTCCGGC
CGTTGTTGATCGGCGGAGTGATTGGATGAAAGACCTCTTACACGGTGGCG
GCAATTAATTGTAGGCACCGCGCGAGAGAGCGGGTAGTCCTCAGTGCGGT
GAATTCTTTGTGACAAGTACTTCACAGATGGTGGCACAAGTCGCCCGCGG
ACATGAGGCCGAACTTTTTTTCTGTCGTTGGGCTTTTTTGTGGGGCAACG
CTGAGAGAATGTTCACAGATCGCATAGATTCTTCCAGTGGCTGGCGGGCG
CAGTTGGTACAAATAATCACAGGTCGCTACAACAGATTTTTCCAGTGACT
GAGGAGGGGGGCCAGTTGGAACCGTCTGCATGCGATTGCTTCCTCGATGT
AGTAGGAGAGGTTGTACCACTGGAGGGCCGACAGCATGTCCATTCAATAC
GTTTGTGGGGTGTTTGATGATGAGATGTGTGACGAACGAATGGCGTGAAT
AATCGTGGACCGAACGTAAGAAGTTCCTCTTCTTCCCCGGAGTTCTTTTT
TCGGCTGGCAGGGCCAATAAGCCAAAGCTCCTCCTCTTTATTTTCCGTTT
TTTGCCCTCCTGCTGATCCTGAGGCAGGAAGTTAGGGACCATTTGTTAGT
TATCACGTCCGCCATCATCGGTTGGTTGTACAACATTGCAG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1028:138..5228-
>mRNA_Ecto-sp13_S_contig1028.287.1 ID=mRNA_Ecto-sp13_S_contig1028.287.1|Name=mRNA_Ecto-sp13_S_contig1028.287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1449bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1028:138..5228- (Ectocarpus species13 EcNAP12_S_4_19m) back to top