Homology
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match:
A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)
HSP 1 Score: 655 bits (1689), Expect = 1.770e-232
Identity = 438/482 (90.87%), Postives = 446/482 (92.53%), Query Frame = 0
Query: 1 MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGARLRPGRWLLSAWRKTADQFRSNMRWGSLSYIARAWEEQSTTTDICSAAEGSAKADSSTCSNNNEAIHGPENAGGTNATNSATVASFLRRRAPRGLAFALVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTRDVAERADDTRPGLAKRSGEDADGEHAVGGESVGGKEEEMDGRMDVGEEGTRKGTSERDEPGPTACPSPEHDREGNDGGKATHAIVRTDGRQQGDVSSDRTIQGGGQPGHSAEEQDSAIARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRATTTPTKPRAEKLRATSKATGPTQAARRKSKDSPRGTSSLKLTPTRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 482
MQWSKRATPAT ASASKPSSAGKRE W RVLESAKWELGSEPR QQTG RLR GRWLLSAWRKTA QFRSNMRWGSLSYIARAWEEQSTTTDICSAA+G AKADSSTCSNNNEAI GPENAGGT+ATN A VASFLRRRAP+GLAFALVVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DTRDVAERA+DTRPGLAKRS ED DGEHAVGG+SVGGKEEEMDGRMDVGEEGTRKGTSE DEPGPTACPSPEHDREGND GK THA VRTDG+QQ DVSSD IQGGGQP HSAEEQDSA+ARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRA TTPTKPRA KLRATSKATGP QAARRKSKDSPRGT SLKLT +RMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLT RALERDPSALSEIAKDASLQQG DK
Sbjct: 1 MQWSKRATPATTASASKPSSAGKREGWSRVLESAKWELGSEPRDQQTGTRLRSGRWLLSAWRKTAHQFRSNMRWGSLSYIARAWEEQSTTTDICSAADGRAKADSSTCSNNNEAIQGPENAGGTDATNPAVVASFLRRRAPQGLAFALVVATVYVVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DTRDVAERANDTRPGLAKRSDEDVDGEHAVGGKSVGGKEEEMDGRMDVGEEGTRKGTSEHDEPGPTACPSPEHDREGNDVGKVTHAGVRTDGQQQDDVSSDGAIQGGGQPSHSAEEQDSALARMSRGQSLLSESSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGGDK 480
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Match:
D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)
HSP 1 Score: 105 bits (263), Expect = 1.760e-24
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0
Query: 423 MTSASRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGRDK 482
MTS SRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQG DK
Sbjct: 1 MTSVSRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGDK 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1028.287.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M Q W S K R A T P A T P A S A S K P S S A G K R E R W W R V L E S A K W E L G S E P R H Q Q T G A R L R P G R W L L S A W R K T A D Q F R S N M R W G S L S Y I A R A W E E Q S T T T D I C S A A E G S A K A D S S T C S N N N E A I H G P E N A G G T N A T N S A T V A S F L R R R A P R G L A F A L V V A A V Y V V Y R R R R R R P G G R P R S R R Q L G E R R S D V A A A A A R Q W W W Q R A G G N G Q E A E R K D D G G G S S S D G G G G D T R D V A E R A D D T R P G L A K R S G E D A D G E H A V G G E S V G G K E E E M D G R M D V G E E G T R K G T S E R D E P G P T A C P S P E H D R E G N D G G K A T H A I V R T D G R Q Q G D V S S D R T I Q G G G Q P G H S A E E Q D S A I A R M S R G Q S L L S E S S T E D I L A E A D H L I A D A A N N T F N S I R A T T T P T K P R A E K L R A T S K A T G P T Q A A R R K S K D S P R G T S S L K L T P T R M T S A S R S S D T R S P K R P R V Y P E V S G E E V D A L V S L T Q R A L E R D P S A L S E I A K D A S L Q Q G R D K * 50 100 150 200 250 300 350 400 450 Expect = 1.77e-232 / Id = 90.87 Expect = 1.76e-24 / Id = 96.67 Sequence A0A6H5JAH0_9PHAE D8LIF2_ECTSI
Match Name E-value Identity Description
A0A6H5JAH0_9PHAE 1.770e-232 90.87 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF2_ECTSI 1.760e-24 96.67 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M Q W S K R A T P A T P A S A S K P S S A G K R E R W W R V L E S A K W E L G S E P R H Q Q T G A R L R P G R W L L S A W R K T A D Q F R S N M R W G S L S Y I A R A W E E Q S T T T D I C S A A E G S A K A D S S T C S N N N E A I H G P E N A G G T N A T N S A T V A S F L R R R A P R G L A F A L V V A A V Y V V Y R R R R R R P G G R P R S R R Q L G E R R S D V A A A A A R Q W W W Q R A G G N G Q E A E R K D D G G G S S S D G G G G D T R D V A E R A D D T R P G L A K R S G E D A D G E H A V G G E S V G G K E E E M D G R M D V G E E G T R K G T S E R D E P G P T A C P S P E H D R E G N D G G K A T H A I V R T D G R Q Q G D V S S D R T I Q G G G Q P G H S A E E Q D S A I A R M S R G Q S L L S E S S T E D I L A E A D H L I A D A A N N T F N S I R A T T T P T K P R A E K L R A T S K A T G P T Q A A R R K S K D S P R G T S S L K L T P T R M T S A S R S S D T R S P K R P R V Y P E V S G E E V D A L V S L T Q R A L E R D P S A L S E I A K D A S L Q Q G R D K * 50 100 150 200 250 300 350 400 450 Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 158..482
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 140..157
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..139
None No IPR available TMHMM TMhelix coord: 140..157
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig1028.287.1 ID=prot_Ecto-sp13_S_contig1028.287.1|Name=mRNA_Ecto-sp13_S_contig1028.287.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=483bp MQWSKRATPATPASASKPSSAGKRERWWRVLESAKWELGSEPRHQQTGAR LRPGRWLLSAWRKTADQFRSNMRWGSLSYIARAWEEQSTTTDICSAAEGS AKADSSTCSNNNEAIHGPENAGGTNATNSATVASFLRRRAPRGLAFALVV AAVYVVYRRRRRRPGGRPRSRRQLGERRSDVAAAAARQWWWQRAGGNGQE AERKDDGGGSSSDGGGGDTRDVAERADDTRPGLAKRSGEDADGEHAVGGE SVGGKEEEMDGRMDVGEEGTRKGTSERDEPGPTACPSPEHDREGNDGGKA THAIVRTDGRQQGDVSSDRTIQGGGQPGHSAEEQDSAIARMSRGQSLLSE SSTEDILAEADHLIADAANNTFNSIRATTTPTKPRAEKLRATSKATGPTQ AARRKSKDSPRGTSSLKLTPTRMTSASRSSDTRSPKRPRVYPEVSGEEVD ALVSLTQRALERDPSALSEIAKDASLQQGRDK* back to top