prot_Ecto-sp13_S_contig1363.2867.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1363.2867.1
Unique Nameprot_Ecto-sp13_S_contig1363.2867.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length204
Homology
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: D8LI97_ECTSI (Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI97_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 2.630e-130
Identity = 193/203 (95.07%), Postives = 200/203 (98.52%), Query Frame = 0
Query:    1 MATLEEKVDQAIAEGLGEEALAEKFKHHGEAFTGFLGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA 203
            MAT+ EKVDQAIAEGLGEEALAEKF+ HG+AFTGFLGDVQANLLSQLNAHS+GPEGFVENFQAFRSAVDWSEPWIQG+LVFHLLLWVFFIVTRRSFGAQVGLFAV+LTGTRLSEFINT LRDRWQ+FSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA
Sbjct:    1 MATVAEKVDQAIAEGLGEEALAEKFEQHGDAFTGFLGDVQANLLSQLNAHSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDRWQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA 203          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A835ZFQ2_9STRA (Transmembrane protein 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.940e-37
Identity = 70/149 (46.98%), Postives = 99/149 (66.44%), Query Frame = 0
Query:   35 FLGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKK 183
            F+  ++AN+L Q      GP+GF+EN QAF +AVDWSE WIQ +L FH+ +    +++R     Q+ LF  I    R +E+ N Y   RW+DF+RQNYFDE G+F+GV+W  PLL++   ML+  + ++A LLVTVK  Q +REIAA+K
Sbjct:   12 FIASLEANML-QAAKSGPGPQGFIENCQAFCAAVDWSETWIQAILCFHVAVAAAALLSRNRLNCQIALFLSICALVRGAEWANAYAARRWRDFARQNYFDERGVFVGVVWCAPLLLVLLGMLLGFVVRSARLLVTVKRAQLRREIAARK 159          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A7S2Y0G5_9STRA (Transmembrane protein 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.790e-34
Identity = 65/149 (43.62%), Postives = 98/149 (65.77%), Query Frame = 0
Query:   36 LGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKD 184
            +  ++  +L        GPEGF EN +AF++AV+W E WIQG+L FH++++V  +V R++F  QV +F +I+     SE INT  ++ WQ+FS Q+YFD +G+FM VM+AGPLL++GF  L + L  +A LLV VK  + K+ +  K D
Sbjct:   53 IASLEDQVLQMARESGAGPEGFWENVEAFKAAVNWEERWIQGILAFHVIVFVLMLVFRKNFNVQVCIFLLIVGLVSCSETINTLGQNHWQEFSTQDYFDPNGLFMMVMFAGPLLLIGFLQLFNFLLISADLLVKVKRAELKKHMREKND 201          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A7S4A3H0_9STRA (Transmembrane protein 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3H0_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.590e-30
Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 0
Query:   36 LGDVQANLLSQLNAHSI--GPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK---REIAA 181
            L DV   L  Q+ A  +   P+ F E   AF +AVDW E WI+ +L++HL LWV F+ TR++F  Q GLF  I     L+E +N     RW+ F+ QNYFDE G+F G+M   PLL L F ML++ L   +S+LVTVK  +F+   RE+ A
Sbjct:   31 LNDVVEGLKDQIFADHVKGAPQTFREECAAFIAAVDWRENWIRCLLLWHLSLWVLFVFTRKNFPVQCGLFFGIAACVALAETLNGLCAKRWEKFATQNYFDERGVFAGIMLCAPLLALAFAMLLNFLVMASSMLVTVKRAEFRGKARELGA 181          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A837A383_9ROSI (Transmembrane protein 18 n=4 Tax=Salix TaxID=40685 RepID=A0A837A383_9ROSI)

HSP 1 Score: 112 bits (281), Expect = 4.550e-28
Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   30 EAFTGFLGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
            EA    + D+   L S+L +   G +  ++NF  F  A+DW EPWI G+  FHLLL +  IV+R+    Q+ LF + L G  LSE +N  L D W+ F+ QNYFD HG+F+ V+W+GPLLI+   +L++ L     ++V  K  + +
Sbjct:    9 EAHMDQMADLVQKLSSELRS---GIKPSIDNFVGFFHAIDWKEPWIMGLTGFHLLLLILTIVSRKHINFQMSLFLLALAGVYLSERLNRVLSDNWRSFASQNYFDPHGVFLSVLWSGPLLIIAIIILINTLFSLCYMIVRWKRAELR 152          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A7S2SGF8_9STRA (Transmembrane protein 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGF8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.860e-27
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:   54 PEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKRE 178
            P G +++ QAF +AVDWSE WIQ +L FH+ LW+  + TRR    Q G F  +      +E +NT+    WQDFS+Q+YF  +G F+GVM+A PLL L    +++ LC  A+LLV VK K+ +R+
Sbjct:   49 PSGLLDDIQAFTAAVDWSERWIQALLGFHVALWMITLWTRRYIWWQCGTFFAVCGLVWSAEPMNTWAAAHWQDFSKQDYFQPNGFFVGVMYAAPLLALAMFQMINFLCIAANLLVEVKRKELRRK 173          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A5N6P3C3_9ASTR (Transmembrane protein 18 n=2 Tax=Asteraceae TaxID=4210 RepID=A0A5N6P3C3_9ASTR)

HSP 1 Score: 109 bits (273), Expect = 6.790e-27
Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 0
Query:   52 IGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
            IG +  ++NF  F  A+DW EPW+ G++VFHL++ +  I +R++   Q+ LF + L G  L+E +NT L + W+ F+ QNYFD HG+F+ V+W+GPLL+    +LV+ L     L+V  K  + K
Sbjct:   28 IGMQPAMDNFIGFFHAIDWKEPWLVGLMVFHLVVLIIIITSRKNINFQMYLFLLSLAGVYLAERLNTVLSNNWKSFAGQNYFDRHGVFLSVLWSGPLLVFATIILVNTLFSLCHLIVKWKRAELK 152          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: U5FW19_POPTR (Transmembrane protein 18 n=8 Tax=Populus TaxID=3689 RepID=U5FW19_POPTR)

HSP 1 Score: 109 bits (272), Expect = 1.010e-26
Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 0
Query:   23 EKFKHHGEAFTGFLGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
            E+ K   EA    + D+   L S+L +   G    ++NF  F  A+DW+EPW+ G++ FHL L +  +V+R+    Q+  F V L G  LSE +N  L D W+ F+ QNYFD HG+F+ V+W+GPLLI+   +L++ L     ++V  K  + +
Sbjct:    2 EELKSALEAHMDQMADLVQKLSSELRS---GFRPAIDNFIGFFHAIDWTEPWLMGLIGFHLALLILTVVSRKHINFQMSFFLVALAGVYLSERLNRVLGDNWRSFASQNYFDPHGLFLSVLWSGPLLIIATIILINTLFSLCFMIVRWKRAELR 152          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: A0A2J6L7N8_LACSA (Transmembrane protein 18 n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7N8_LACSA)

HSP 1 Score: 107 bits (267), Expect = 5.360e-26
Identity = 50/140 (35.71%), Postives = 85/140 (60.71%), Query Frame = 0
Query:   38 DVQANLLSQLNAH-SIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
            D    L+ ++++   IG +  ++NF  F  A+DW EPW+ G++VFH +  +  + +R++   Q+ LF + L G  L+E +NT L D W+ F+ QNYFD +G+F+ V+W+GPLL+    +LV+ L     L+V  K  + +
Sbjct:   13 DQMQELVEKISSELRIGMQPAMDNFIGFFHAIDWKEPWLVGLMVFHFVTLIIILTSRKNINFQMSLFLLSLAGVYLAERLNTVLSDNWKSFAGQNYFDRNGVFLSVLWSGPLLVFSLIILVNTLFSLCQLMVKWKRAELR 152          
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Match: UPI001CF95CC8 (transmembrane protein 18-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF95CC8)

HSP 1 Score: 107 bits (266), Expect = 7.560e-26
Identity = 53/147 (36.05%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   30 EAFTGFLGDVQANLLSQLNAHSIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQVGLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
            EA    + D+   L S+L +   G +   ENF  F  A++W EPW+ G++ FH+LL +  I +R++   Q+ LF + L G   +E++N  L   W+ F+ QNYFD HG+F+ V+W+GPLL++   +LV+ L     L+V  K  + +
Sbjct:    9 EAHMDQMADLVQKLSSELRS---GLQPAYENFMGFFHAINWKEPWLMGLMAFHILLLIVVIFSRQNVNFQMCLFLMALAGVYFAEYLNRILEKNWRSFATQNYFDPHGLFLSVLWSGPLLVIAIIILVNTLFSLCYLIVRWKKAELR 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1363.2867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI97_ECTSI2.630e-13095.07Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZFQ2_9STRA1.940e-3746.98Transmembrane protein 18 n=1 Tax=Tribonema minus T... [more]
A0A7S2Y0G5_9STRA3.790e-3443.62Transmembrane protein 18 n=1 Tax=Fibrocapsa japoni... [more]
A0A7S4A3H0_9STRA4.590e-3044.37Transmembrane protein 18 n=1 Tax=Pelagomonas calce... [more]
A0A837A383_9ROSI4.550e-2839.46Transmembrane protein 18 n=4 Tax=Salix TaxID=40685... [more]
A0A7S2SGF8_9STRA2.860e-2744.80Transmembrane protein 18 n=1 Tax=Rhizochromulina m... [more]
A0A5N6P3C3_9ASTR6.790e-2740.80Transmembrane protein 18 n=2 Tax=Asteraceae TaxID=... [more]
U5FW19_POPTR1.010e-2637.01Transmembrane protein 18 n=8 Tax=Populus TaxID=368... [more]
A0A2J6L7N8_LACSA5.360e-2635.71Transmembrane protein 18 n=2 Tax=Lactuca TaxID=423... [more]
UPI001CF95CC87.560e-2636.05transmembrane protein 18-like n=3 Tax=Anacardiacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 64..178
e-value: 3.5E-39
score: 133.4
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 25..183
NoneNo IPR availablePANTHERPTHR22593FAMILY NOT NAMEDcoord: 25..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..168
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..99
NoneNo IPR availableTMHMMTMhelixcoord: 74..91
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 96..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1363contigEcto-sp13_S_contig1363:11592..14102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1363.2867.1mRNA_Ecto-sp13_S_contig1363.2867.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1363 11592..14102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1363.2867.1 ID=prot_Ecto-sp13_S_contig1363.2867.1|Name=mRNA_Ecto-sp13_S_contig1363.2867.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=204bp
MATLEEKVDQAIAEGLGEEALAEKFKHHGEAFTGFLGDVQANLLSQLNAH
SIGPEGFVENFQAFRSAVDWSEPWIQGVLVFHLLLWVFFIVTRRSFGAQV
GLFAVILTGTRLSEFINTYLRDRWQDFSRQNYFDEHGIFMGVMWAGPLLI
LGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKAS
KQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026721TMEM18