prot_Ecto-sp13_S_contig13611.2857.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13611.2857.1
Unique Nameprot_Ecto-sp13_S_contig13611.2857.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: C5KUT3_PERM5 (Regulatory protein, putative (Fragment) n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KUT3_PERM5)

HSP 1 Score: 63.2 bits (152), Expect = 3.990e-10
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    3 QVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSR 45
            +VWD  +GQ + TL+GH DE+LDV FN+TGSR+ TASADGT++
Sbjct:    2 KVWDGDTGQLLDTLKGHQDEVLDVVFNSTGSRIATASADGTAK 44          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A7K5Y3F5_9CHAR (DAW1 factor (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7K5Y3F5_9CHAR)

HSP 1 Score: 61.2 bits (147), Expect = 4.900e-9
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 TVQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFN 48
            +VQ+W+  +G  + TL GH+DEILDV F+  G R+ TASADG+SR++N
Sbjct:  115 SVQLWNAMTGAHIATLTGHSDEILDVCFDYAGQRIATASADGSSRIYN 162          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A7L2RRB6_9PASS (DAW1 factor (Fragment) n=1 Tax=Neodrepanis coruscans TaxID=254563 RepID=A0A7L2RRB6_9PASS)

HSP 1 Score: 60.1 bits (144), Expect = 1.340e-8
Identity = 25/48 (52.08%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 TVQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFN 48
            ++Q+W+  +G  + TL GH +E+LDV F+ TG R+VTASADG++RV+N
Sbjct:  115 SLQLWNAMTGTHIATLTGHRNEVLDVCFDFTGQRIVTASADGSARVYN 162          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A672R9L4_SINGR (Uncharacterized protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672R9L4_SINGR)

HSP 1 Score: 61.2 bits (147), Expect = 1.660e-8
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    4 VWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADG 42
            VWD  SGQC+ TL GHNDE+LDV FN TG  + TASADG
Sbjct:  275 VWDADSGQCLATLLGHNDEVLDVCFNYTGQLIATASADG 313          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A4S2LNK7_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2LNK7_OPIFE)

HSP 1 Score: 61.2 bits (147), Expect = 2.020e-8
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    4 VWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFN 48
            VWD  +G+ +H L GH DE+LDV+F+A+G RLV+ASAD TSRV++
Sbjct:  345 VWDTRTGRQLHVLTGHLDEVLDVTFDASGRRLVSASADSTSRVWD 389          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A7S2TLG7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLG7_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 1.100e-7
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 TVQVWDVASGQCVHTLRGHNDEILDVSFNATGS 33
            TV++WDV SG+C++TL GH DEILDV FNATGS
Sbjct:   50 TVKIWDVESGKCLNTLEGHEDEILDVCFNATGS 82          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A6V7H851_9HYME (Hypothetical protein (Fragment) n=1 Tax=Heterotrigona itama TaxID=395501 RepID=A0A6V7H851_9HYME)

HSP 1 Score: 54.7 bits (130), Expect = 6.690e-7
Identity = 22/48 (45.83%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 TVQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFN 48
            T +VW+     C+ TLR H+DE+LD++FN  G +L +AS+D T+RV++
Sbjct:    4 TAKVWETRMNSCLATLREHDDEVLDLTFNNNGKKLASASSDTTARVWD 51          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A3B4AGF3_9GOBI (Dynein assembly factor with WDR repeat domains 1 n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AGF3_9GOBI)

HSP 1 Score: 56.2 bits (134), Expect = 1.090e-6
Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    4 VWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRV 46
            +WD +SG CV TL GH +E+LD+ FN   +RL+TAS+D T+R+
Sbjct:  303 LWDTSSGNCVATLEGHKEELLDLCFNPQSTRLLTASSDRTARL 345          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: A0A4P1QPX2_LUPAN (Uncharacterized protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1QPX2_LUPAN)

HSP 1 Score: 56.2 bits (134), Expect = 1.090e-6
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    2 VQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVF 47
            V++WD  SG+CV T RGH+D I  +S +A    LV+AS DGT+RVF
Sbjct:  341 VRLWDSRSGECVRTFRGHSDAIQSISVSANKDYLVSASIDGTARVF 386          
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Match: K8F226_9CHLO (Angio-associated migratory cell protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F226_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 1.620e-6
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 VQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFN 48
            V++WD  + QCV   +GH   ILD + +   +R++TAS DGTSRVFN
Sbjct:   19 VRLWDARTSQCVREQQGHTKAILDFALSPDYARVLTASDDGTSRVFN 65          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13611.2857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
C5KUT3_PERM53.990e-1062.79Regulatory protein, putative (Fragment) n=2 Tax=Pe... [more]
A0A7K5Y3F5_9CHAR4.900e-954.17DAW1 factor (Fragment) n=5 Tax=Neognathae TaxID=88... [more]
A0A7L2RRB6_9PASS1.340e-852.08DAW1 factor (Fragment) n=1 Tax=Neodrepanis corusca... [more]
A0A672R9L4_SINGR1.660e-869.23Uncharacterized protein n=1 Tax=Sinocyclocheilus g... [more]
A0A4S2LNK7_OPIFE2.020e-860.00Uncharacterized protein n=1 Tax=Opisthorchis felin... [more]
A0A7S2TLG7_9EUKA1.100e-772.73Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A6V7H851_9HYME6.690e-745.83Hypothetical protein (Fragment) n=1 Tax=Heterotrig... [more]
A0A3B4AGF3_9GOBI1.090e-653.49Dynein assembly factor with WDR repeat domains 1 n... [more]
A0A4P1QPX2_LUPAN1.090e-654.35Uncharacterized protein n=3 Tax=Lupinus TaxID=3869... [more]
K8F226_9CHLO1.620e-648.94Angio-associated migratory cell protein n=1 Tax=Ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 93..125
e-value: 19.0
score: 8.9
coord: 51..90
e-value: 9.4E-8
score: 41.8
coord: 9..48
e-value: 8.4E-10
score: 48.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 10..48
e-value: 1.9E-7
score: 31.6
coord: 94..123
e-value: 0.0041
score: 17.9
coord: 52..90
e-value: 2.2E-5
score: 25.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 16..57
score: 11.879
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 58..99
score: 14.519
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..125
e-value: 2.4E-41
score: 143.6
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 1..123
NoneNo IPR availablePANTHERPTHR44156:SF1DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1coord: 1..123
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 77..91
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..126
score: 32.193
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13611contigEcto-sp13_S_contig13611:650..1722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13611.2857.1mRNA_Ecto-sp13_S_contig13611.2857.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13611 650..1722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13611.2857.1 ID=prot_Ecto-sp13_S_contig13611.2857.1|Name=mRNA_Ecto-sp13_S_contig13611.2857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
TVQVWDVASGQCVHTLRGHNDEILDVSFNATGSRLVTASADGTSRVFNTM
NGACQAILIGHEGEISKTCFNPQGTRILTASSDKVARLWDADTGDCLQIL
EGHTDEIFSCAFNYEGDTIITGTMSI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf