mRNA_Ecto-sp13_S_contig13573.2834.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13573.2834.1
Unique NamemRNA_Ecto-sp13_S_contig13573.2834.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: D7G5P1_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P1_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 4.400e-146
Identity = 210/223 (94.17%), Postives = 211/223 (94.62%), Query Frame = 1
Query:    1 MAVMRDQQGAATRSRXXXXXXXGTATTKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            MAVM  QQGAATRSR       GT+ TKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAA RFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEK CKDCQGPGIAVRMHQLGPGFVQQV
Sbjct:    1 MAVMHAQQGAATRSRRRRGGSGGTSATKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAATRFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKKCKDCQGPGIAVRMHQLGPGFVQQV 223          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A835Z111_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z111_9STRA)

HSP 1 Score: 233 bits (594), Expect = 4.380e-71
Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1
Query:  124 SCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSA---DPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            S  LAL  L+VLVSG KD Y+VLG+ RGAS ++IKKAYR+LSLKYHPDKNPSEDAA  FAEVA+AYEVLSD +KR TYD +GEEGLKR          DPF D F +FGF G RR+ E  RT +V +PLRVSLRQLY GD F+  +VRQ MC+ AG+CE  C +C GPG+AVR  +LGPGFVQQ+
Sbjct:   13 SVVLALCTLLVLVSGGKDYYDVLGVARGASEADIKKAYRKLSLKYHPDKNPSEDAATHFAEVATAYEVLSDADKRSTYDNYGEEGLKRRXXXXXXXXXDPF-DSFFNFGFPGQRRRDEVQRTKDVHLPLRVSLRQLYTGDVFEVHFVRQVMCLRAGECETKCPECHGPGLAVRTQRLGPGFVQQM 196          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A7S2UXH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXH4_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.050e-70
Identity = 117/202 (57.92%), Postives = 145/202 (71.78%), Query Frame = 1
Query:  112 RLQWSCFLALAGLVVLV--------SGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQ----GGSADPFGDMFSHFGFGG--GRRQRE--ESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            R + S FL  A L+V++        +  +D Y++LG+ R AS  EIKKAYR+LSL+YHPDKNPSEDA+++FA+VA+AYE LSDEEKR TYDR+GEEGL++ E     GG  DPF  MF  FGFGG  GRR R   E RTP++ +PLRVSLRQLY GD FD  Y+R+ +C   G+CEKNC DC GPG+ V+  QL PGFVQQV
Sbjct:   11 RARMSSFLIFAILLVMMPFTLWKAAAQDRDFYKILGVSRKASDKEIKKAYRKLSLQYHPDKNPSEDASSKFADVAAAYECLSDEEKRKTYDRYGEEGLQKMEARQNAGGGGDPFSSMFEAFGFGGFGGRRGRGDGERRTPDLTLPLRVSLRQLYLGDIFDMTYIREVLCTNHGECEKNCPDCHGPGVRVKTQQLAPGFVQQV 212          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: K0T887_THAOC (J domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T887_THAOC)

HSP 1 Score: 209 bits (533), Expect = 4.340e-63
Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 1
Query:  136 ALAGLVVLVS-----GQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQ----GGSADPFGDMFSHFGFGGG----RRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            AL  LV L++     G ++ Y++LG+ + AS  EIKKAYRQ SL+YHPDKN  E AA +FAE+  AYEVL+DEEK++ YDR GEEGLK+ EQ    GG    F D+FSHFGFGGG    RRQRE+S TPNV++PLRV+L+QLY GD  +  YVRQ +C    +C KN ++CQGPG+ VRM Q+ PGFVQQV
Sbjct:   12 ALQFLVALLAFSVAHGAENFYKLLGISKNASPKEIKKAYRQKSLQYHPDKNKEEGAAEKFAEINYAYEVLTDEEKKNVYDRHGEEGLKQHEQRQGQGGGHGGFDDIFSHFGFGGGFGGQRRQREQS-TPNVDVPLRVTLKQLYLGDEIEVSYVRQTLCTNWQECMKNNQECQGPGVKVRMQQIAPGFVQQV 201          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A835ZCK1_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 7.620e-62
Identity = 106/187 (56.68%), Postives = 127/187 (67.91%), Query Frame = 1
Query:  124 SCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHF-----GFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            +C L L G +  V+  +D Y +LGL + AS SEIKKAYRQLSLKYHPDKN SEDAA  FAEVASAYEVLSD +KR TYD +GEEGLK+ E                    GF G R + E  RT NVE+PLRVSLRQLY GD F+  +VRQ MC+ A +CEK C +C GPG+A+R  ++ PGFVQQ+
Sbjct:    5 ACLLLLLGALA-VAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQI 190          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: B7FRV0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRV0_PHATC)

HSP 1 Score: 200 bits (509), Expect = 2.170e-59
Identity = 111/198 (56.06%), Postives = 137/198 (69.19%), Query Frame = 1
Query:  112 RLQWSC--FLALAGLVVLV----SGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP---FGDMFSHFGF--GGGRRQRE-ESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            RL  +C  FL L   V+LV    +  +D Y++LG+ R A+  EIKKAYRQ SL++HPDKN  E A+ +FAEVA AYEVLSD+E +  YDR GE+GLK+ EQ G       F D+FS FGF  GGGR+QR+ E RTP+VEIPL VSL+QLY G+T D  YVRQ +C+    C K+  DCQGPG+ VR  QL PGFVQQV
Sbjct:   13 RLWQTCIVFLLLGSHVLLVPVVQAASRDYYQILGVSRDATIKEIKKAYRQKSLEFHPDKNKDEGASEKFAEVARAYEVLSDDELKAVYDRHGEDGLKQREQRGXXXXXXXFEDLFSQFGFDFGGGRQQRDQEQRTPDVEIPLYVSLKQLYLGETIDVDYVRQVLCLQWEMCVKSAPDCQGPGVRVRRQQLAPGFVQQV 210          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: B8BTB9_THAPS (J domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTB9_THAPS)

HSP 1 Score: 197 bits (502), Expect = 1.820e-58
Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 1
Query:  172 KDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP----FGDMFSHFGF----GGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            +D Y++LG+ R A+  EIKKAYR  SL++HPDKN  E AA +FAE+A AYEVL+DEEK+  YDR GEEGLK+ EQ G        F D+FSHFGF    G GRRQRE++ TPNV++PLRV+L+QLY GDT +  YVR  +CV   +C K  ++CQGPG+ VRM Q+ PGFVQQV
Sbjct:   27 QDFYKLLGITRKATQKEIKKAYRSKSLEFHPDKNKEEGAAEKFAEIAYAYEVLTDEEKKGIYDRHGEEGLKQHEQRGGXXXXHGGFDDIFSHFGFNFGGGQGRRQREQT-TPNVDVPLRVTLKQLYLGDTIEVEYVRNTLCVNWQECMKANQECQGPGVKVRMQQIAPGFVQQV 199          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A0G4GG88_VITBC (J domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG88_VITBC)

HSP 1 Score: 194 bits (494), Expect = 2.510e-57
Identity = 100/204 (49.02%), Postives = 137/204 (67.16%), Query Frame = 1
Query:   79 TKSAVCGSWVGRLQWSCFLALAGLVVLVSGQ-----KDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQR---EESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQ 666
            ++S  C  W+  L       L  L+VL+S       +D Y++LG+ + +S+SEIKKAYR+LS+KYHPDKNP ++A+ +FAE+A AYE+LSD+EKR  YD  GEEGLK+  Q    DPF D+FS FGFGGGRR     E+ +TPN+++ LRV+L QLY G+ F   Y RQ +CV   +C  + +DCQG G+ V   Q+GPGF+ Q
Sbjct:    4 SRSIACPPWLVSL-------LLPLIVLLSATLSQCGRDFYKILGVKKESSASEIKKAYRKLSMKYHPDKNPEKEASKKFAEIAEAYEILSDDEKRSIYDNHGEEGLKQQHQESHMDPF-DIFSAFGFGGGRRXXXXXEKEKTPNLDMKLRVTLEQLYFGELFHVTYRRQVLCVNVDECTVDRRDCQGAGLRVVTQQMGPGFIVQ 199          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A7S0GKJ3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKJ3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.140e-56
Identity = 97/179 (54.19%), Postives = 125/179 (69.83%), Query Frame = 1
Query:  148 LVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP----FGDMFSHFGFGGGRRQREE-SRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            + +L+  + D Y+ LG+ R A+  EIKKAYR  SL++HPDKN +E AA +F E++ AYEVLSDEEKR  YD  GEEGLKR E G         F D+FSHFGFGG +RQ +   RTP+VEIPLR++L+Q+YEG   +  YVRQ +C+    C K  K+CQGPG+ V+M Q+ PGFVQQV
Sbjct:    7 VALLILARADFYDDLGISRKATLKEIKKAYRSKSLEFHPDKNKAEGAADKFGEISRAYEVLSDEEKRQIYDERGEEGLKRHEDGXXXXXXXXXFDDIFSHFGFGGRQRQDDGVQRTPSVEIPLRLTLQQMYEGVELEVDYVRQTLCMNWEMCMKTSKECQGPGVKVKMQQIAPGFVQQV 185          
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A4D9DAZ8_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAZ8_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.490e-56
Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 1
Query:  133 LALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQG---GSADPFGD-MFSHFGFGG----GRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
            L L   ++   G +D Y+ LG+ R AS SEIKKA+R+LSL  HPDKN S DA  +FA  ++AY VLS+EE+R+ YDR GEEGLKR E     GS DPFG  +F  FGFGG    GRR+ EE++TPNV IPLRVSL+QL+ GD  +  Y+RQ +C+   +C K   +CQGPG+ +R   L PGF+QQV
Sbjct:    5 LCLLIFILRGHGAEDYYKTLGIKRSASQSEIKKAWRKLSLDLHPDKNNSPDAQEKFATASNAYTVLSNEERREVYDREGEEGLKRMEAREAQGSMDPFGGGIFEAFGFGGFGGGGRRRDEEAKTPNVVIPLRVSLKQLFTGDLLEVTYIRQVLCMNHKECTKPAPECQGPGVRLRQQHLAPGFIQQV 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5P1_ECTSI4.400e-14694.17Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z111_9STRA4.380e-7164.32J domain-containing protein n=1 Tax=Tribonema minu... [more]
A0A7S2UXH4_9STRA2.050e-7057.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K0T887_THAOC4.340e-6357.59J domain-containing protein n=1 Tax=Thalassiosira ... [more]
A0A835ZCK1_9STRA7.620e-6256.68Heat shock protein 40 n=1 Tax=Tribonema minus TaxI... [more]
B7FRV0_PHATC2.170e-5956.06Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8BTB9_THAPS1.820e-5858.05J domain-containing protein n=1 Tax=Thalassiosira ... [more]
A0A0G4GG88_VITBC2.510e-5749.02J domain-containing protein n=2 Tax=Vitrella brass... [more]
A0A7S0GKJ3_9STRA1.140e-5654.19Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A4D9DAZ8_9STRA1.490e-5653.48J domain-containing protein n=2 Tax=Monodopsidacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13573contigEcto-sp13_S_contig13573:2024..4684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score208.4
Seed ortholog evalue3.5e-51
Seed eggNOG ortholog159749.K0T887
Model size669
Hectar predicted targeting categoryother localisation
GOsGO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141
Exons4
EggNOG free text desc.DnaJ C terminal domain
EggNOG OGs2XB20@2836,COG0484@1,KOG0712@2759
Cds size669
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462724.942572-CDS-Ecto-sp13_S_contig13573:2023..22501681462724.942572-CDS-Ecto-sp13_S_contig13573:2023..2250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13573 2024..2250 +
1681462724.9619195-CDS-Ecto-sp13_S_contig13573:3436..35561681462724.9619195-CDS-Ecto-sp13_S_contig13573:3436..3556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13573 3437..3556 +
1681462724.9706616-CDS-Ecto-sp13_S_contig13573:4066..42111681462724.9706616-CDS-Ecto-sp13_S_contig13573:4066..4211Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13573 4067..4211 +
1681462724.9816415-CDS-Ecto-sp13_S_contig13573:4507..46841681462724.9816415-CDS-Ecto-sp13_S_contig13573:4507..4684Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13573 4508..4684 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13573.2834.1prot_Ecto-sp13_S_contig13573.2834.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13573 2024..4684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13573.2834.1

>prot_Ecto-sp13_S_contig13573.2834.1 ID=prot_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp
MAVMRDQQGAATRSRRRRGGSGGTATTKSAVCGSWVGRLQWSCFLALAGL
VVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARF
AEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGG
GRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNC
KDCQGPGIAVRMHQLGPGFVQQV
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mRNA from alignment at Ecto-sp13_S_contig13573:2024..4684+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13573.2834.1 ID=mRNA_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2661bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13573:2024..4684+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGTTATGCGCGACCAGCAGGGAGCGGCGACAAGATCGCGCAGGAG ACGCGGAGGAAGCGGAGGGACCGCCACTACGAAATCAGCAGTCTGTGGAA GCTGGGTTGGGCGCTTGCAATGGAGCTGCTTCCTGGCTCTTGCGGGTCTG GTGGTTCTGGTGTCTGGCCAAAAGGACTTGTATGAGGTCCTGGGTCTAGG CAGAGGGGCGAGCTCCTCTGAGATCAAGTAAGTGCCTGCCGCCGCAGCAG TCCGAGGAGGTGTGTGTATTTTTTTTTTCGTCTCCCCGACGGTGTGCCCG GATATATGGACTCGTGCGCGCATCTCACCGTACGGTCTTGCTCTGCGTGT GGTAGCTCCTCGATTATCTGATCGAGGCGACCCCTGTAGAGTTTCGTCGT TCTAGTTTCACCCTTCAAAAAGCTGGGCAACTTTCTTACCCTGGTCAAAA AATGCATTCAGATATGGGCGTGGTGTTGTTTTCCTCTTTTGTTGTGAGTC CGTCGCGTTGCTGCACCGCCATAGAAAGAGAGCGTGCGAGGATACCTTTT CGTAGACTACTGCTGCATTCACCTCCGCGCTGACCTTCGCGTTGCAGCCG TTCAACAAAGCGGAGATCTGTCAACAGTAGGAGGGCGACGCGGCCTCGGC CGTTGCACAACAGGCATCAAGTGGGAGAAAGAAAAATAAAGAAGCTTGTA ATGAGGTCGCAGTACTTGGTACCACAGCAGTGAGTGCACCATGTGTTTGT GTGGAACAAACGTGCACGTTACAACAGAGCCAGCGCAGTCAAGAGAGAAG CATTTACAAGCAGATTCATGAACATGCATGTGGCAATGCCCGTACTGTCG GGGTCCCTCTACAGGGCGGGCTGTACAAGGCGTGTGGCCGGTCTAGGTTG GGCGAAGTATCTATGCAATAGACAGATCAATCAGATGATATTTATGCTTT AAGCAAGAGTGGATACCCCGAAGTGGCGGCCCAATCGGCCGTGTGTATAT ACCTGTCCGCTACTGAAGGACACCGACGGCACGGAGTTTGGGATGTCGAT TCGCTAAAAGAGAAGTGCGGTTCCTCTACACTTTACACACTCTGGCGGTG AGAAGCAGAGACCGTCCAATTCTCCGCCCAACACCATGCATCTCTTTTTG GGGGCGAATCGCAAGGAAAGATAAAGAGGAGCAGTACCGATACTTTTTTT GCAGTAGAGCCTGCTGCTCAGTTCCCCAGGGTATGGAGGGGCTGTCGACA CCGTTTCGAACTCAAGTCCTGGCCATCCCTTTTTGTCGGCCTGCTTTTTT CCTCATCATGACTGCTAGGTTGTGCTTGTTGGGTTTCGATCGTCGCTACT TGAATACGCAGCGTTGTTGTGGCTCGCCCATTGCCGCCGCCGCCCTCGTG CCGCGCCCTGCAGGAAGGCGTACCGGCAGCTGTCGCTCAAGTACCATCCG GACAAGAACCCTAGCGAGGACGCCGCGGCGCGTTTCGCGGAGGTGGCGTC TGCATACGAGGTGCTCTCCGACGAGGAAAAGCGGTGAGTATGGTACGGTG GTGTGGCGTCACTCGTGCCCTACTTCTAGTTCCTTATACAACTGTGCTTC TATCGGTTCTGGTGTATCTTTTGCTTACGATGTCGCGAAAAAGATTTGGG TTGTAGTTGAGGATACGGTGTTGACCGTGGAGTTGACCGATCCCTGCTTC TCATCGCCGCTGTTGCTGGCGTTGGTGTGTGTGCAGAACGCGCCGCCGCT TCGTAACAACCCCTTGTTCTTGGTTTCGGCAGCCCTCGCGACTTGTTGCT ACCTCTATGATGAAAAAAACGACAGAGAATATCTAGGTGAGTGTCAGGTG AGTAATTGGACTCTCAAGCCTCAACCACTAAGTTCTTCTATGGTAGTGCG TGTCGGTGTGACGTCGACGTGCGTGATCTCCGTAGAGGCCAGACGAGGCC TCGTTCCCGGAGGAAGCGTCTTCCCCGGTTGGGGGAACCTATTGATCTAA GCGTTTTTCTCGTTGCCTGGGTTCCGGTTCCCGTGGTGTTCAGGGATACG TACGACAGGTTCGGCGAAGAAGGCCTTAAGCGCACGGAGCAGGGCGGCAG CGCAGACCCCTTCGGCGACATGTTCTCACACTTCGGGTTCGGTGGAGGTC GGCGTCAACGAGAAGAGAGCCGGACGCCAAATGTGGAGGTGAGATACGGT CAAGGTCCACGACGCGTGGTCGCGTGGTTGCAGTATTTACCTACAATGCG GAAGTGCGTCTGGCATTCGACAACCGTTTTATGGCCAGCATTAAGGTCAA AGAAGTACGTGCGGCAAGCAACGAAGGAGCAAGCCCGAACCCTCCTTCCC CACATGCTGCTTTGACCCGACTGTGCGGTTCCCAACTCATCAACCTGTGT TAGGTCGGTTGTCAACAAATTTTGTTCGCCTCCAATGCCGACTTCTCACT ATTCCCTCCCTACCGCCTACGTCGTTGTCTTCAGATCCCCTTGCGAGTAT CCCTGCGTCAGCTGTACGAGGGGGACACTTTCGACACCGTCTACGTCCGC CAGGCGATGTGCGTTGGGGCGGGCCAGTGCGAAAAGAACTGCAAGGATTG CCAGGGCCCCGGCATCGCCGTCAGGATGCACCAGCTCGGCCCCGGCTTCG TGCAGCAGGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13573:2024..4684+

>mRNA_Ecto-sp13_S_contig13573.2834.1 ID=mRNA_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13573:2024..4684+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGTTATGCGCGACCAGCAGGGAGCGGCGACAAGATCGCGCAGGAG
ACGCGGAGGAAGCGGAGGGACCGCCACTACGAAATCAGCAGTCTGTGGAA
GCTGGGTTGGGCGCTTGCAATGGAGCTGCTTCCTGGCTCTTGCGGGTCTG
GTGGTTCTGGTGTCTGGCCAAAAGGACTTGTATGAGGTCCTGGGTCTAGG
CAGAGGGGCGAGCTCCTCTGAGATCAAGAAGGCGTACCGGCAGCTGTCGC
TCAAGTACCATCCGGACAAGAACCCTAGCGAGGACGCCGCGGCGCGTTTC
GCGGAGGTGGCGTCTGCATACGAGGTGCTCTCCGACGAGGAAAAGCGGGA
TACGTACGACAGGTTCGGCGAAGAAGGCCTTAAGCGCACGGAGCAGGGCG
GCAGCGCAGACCCCTTCGGCGACATGTTCTCACACTTCGGGTTCGGTGGA
GGTCGGCGTCAACGAGAAGAGAGCCGGACGCCAAATGTGGAGATCCCCTT
GCGAGTATCCCTGCGTCAGCTGTACGAGGGGGACACTTTCGACACCGTCT
ACGTCCGCCAGGCGATGTGCGTTGGGGCGGGCCAGTGCGAAAAGAACTGC
AAGGATTGCCAGGGCCCCGGCATCGCCGTCAGGATGCACCAGCTCGGCCC
CGGCTTCGTGCAGCAGGTT
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