mRNA_Ecto-sp13_S_contig13573.2834.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: D7G5P1_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P1_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 4.400e-146 Identity = 210/223 (94.17%), Postives = 211/223 (94.62%), Query Frame = 1
Query: 1 MAVMRDQQGAATRSRXXXXXXXGTATTKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
MAVM QQGAATRSR GT+ TKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAA RFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEK CKDCQGPGIAVRMHQLGPGFVQQV
Sbjct: 1 MAVMHAQQGAATRSRRRRGGSGGTSATKSAVCGSWVGRLQWSCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAATRFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKKCKDCQGPGIAVRMHQLGPGFVQQV 223
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A835Z111_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z111_9STRA) HSP 1 Score: 233 bits (594), Expect = 4.380e-71 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 124 SCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSA---DPFGDMFSHFGFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
S LAL L+VLVSG KD Y+VLG+ RGAS ++IKKAYR+LSLKYHPDKNPSEDAA FAEVA+AYEVLSD +KR TYD +GEEGLKR DPF D F +FGF G RR+ E RT +V +PLRVSLRQLY GD F+ +VRQ MC+ AG+CE C +C GPG+AVR +LGPGFVQQ+
Sbjct: 13 SVVLALCTLLVLVSGGKDYYDVLGVARGASEADIKKAYRKLSLKYHPDKNPSEDAATHFAEVATAYEVLSDADKRSTYDNYGEEGLKRRXXXXXXXXXDPF-DSFFNFGFPGQRRRDEVQRTKDVHLPLRVSLRQLYTGDVFEVHFVRQVMCLRAGECETKCPECHGPGLAVRTQRLGPGFVQQM 196
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A7S2UXH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXH4_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.050e-70 Identity = 117/202 (57.92%), Postives = 145/202 (71.78%), Query Frame = 1
Query: 112 RLQWSCFLALAGLVVLV--------SGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQ----GGSADPFGDMFSHFGFGG--GRRQRE--ESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
R + S FL A L+V++ + +D Y++LG+ R AS EIKKAYR+LSL+YHPDKNPSEDA+++FA+VA+AYE LSDEEKR TYDR+GEEGL++ E GG DPF MF FGFGG GRR R E RTP++ +PLRVSLRQLY GD FD Y+R+ +C G+CEKNC DC GPG+ V+ QL PGFVQQV
Sbjct: 11 RARMSSFLIFAILLVMMPFTLWKAAAQDRDFYKILGVSRKASDKEIKKAYRKLSLQYHPDKNPSEDASSKFADVAAAYECLSDEEKRKTYDRYGEEGLQKMEARQNAGGGGDPFSSMFEAFGFGGFGGRRGRGDGERRTPDLTLPLRVSLRQLYLGDIFDMTYIREVLCTNHGECEKNCPDCHGPGVRVKTQQLAPGFVQQV 212
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: K0T887_THAOC (J domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T887_THAOC) HSP 1 Score: 209 bits (533), Expect = 4.340e-63 Identity = 110/191 (57.59%), Postives = 138/191 (72.25%), Query Frame = 1
Query: 136 ALAGLVVLVS-----GQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQ----GGSADPFGDMFSHFGFGGG----RRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
AL LV L++ G ++ Y++LG+ + AS EIKKAYRQ SL+YHPDKN E AA +FAE+ AYEVL+DEEK++ YDR GEEGLK+ EQ GG F D+FSHFGFGGG RRQRE+S TPNV++PLRV+L+QLY GD + YVRQ +C +C KN ++CQGPG+ VRM Q+ PGFVQQV
Sbjct: 12 ALQFLVALLAFSVAHGAENFYKLLGISKNASPKEIKKAYRQKSLQYHPDKNKEEGAAEKFAEINYAYEVLTDEEKKNVYDRHGEEGLKQHEQRQGQGGGHGGFDDIFSHFGFGGGFGGQRRQREQS-TPNVDVPLRVTLKQLYLGDEIEVSYVRQTLCTNWQECMKNNQECQGPGVKVRMQQIAPGFVQQV 201
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A835ZCK1_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK1_9STRA) HSP 1 Score: 206 bits (524), Expect = 7.620e-62 Identity = 106/187 (56.68%), Postives = 127/187 (67.91%), Query Frame = 1
Query: 124 SCFLALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHF-----GFGGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
+C L L G + V+ +D Y +LGL + AS SEIKKAYRQLSLKYHPDKN SEDAA FAEVASAYEVLSD +KR TYD +GEEGLK+ E GF G R + E RT NVE+PLRVSLRQLY GD F+ +VRQ MC+ A +CEK C +C GPG+A+R ++ PGFVQQ+
Sbjct: 5 ACLLLLLGALA-VAAARDFYAILGLKKTASDSEIKKAYRQLSLKYHPDKNKSEDAATHFAEVASAYEVLSDPDKRSTYDNYGEEGLKQQEXXXXXXXXXXXXXXXXXXXXGFPGQRARDEVPRTANVEVPLRVSLRQLYSGDAFEASFVRQVMCLRAAECEKRCPECMGPGVAMRTQKIAPGFVQQI 190
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: B7FRV0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRV0_PHATC) HSP 1 Score: 200 bits (509), Expect = 2.170e-59 Identity = 111/198 (56.06%), Postives = 137/198 (69.19%), Query Frame = 1
Query: 112 RLQWSC--FLALAGLVVLV----SGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP---FGDMFSHFGF--GGGRRQRE-ESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
RL +C FL L V+LV + +D Y++LG+ R A+ EIKKAYRQ SL++HPDKN E A+ +FAEVA AYEVLSD+E + YDR GE+GLK+ EQ G F D+FS FGF GGGR+QR+ E RTP+VEIPL VSL+QLY G+T D YVRQ +C+ C K+ DCQGPG+ VR QL PGFVQQV
Sbjct: 13 RLWQTCIVFLLLGSHVLLVPVVQAASRDYYQILGVSRDATIKEIKKAYRQKSLEFHPDKNKDEGASEKFAEVARAYEVLSDDELKAVYDRHGEDGLKQREQRGXXXXXXXFEDLFSQFGFDFGGGRQQRDQEQRTPDVEIPLYVSLKQLYLGETIDVDYVRQVLCLQWEMCVKSAPDCQGPGVRVRRQQLAPGFVQQV 210
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: B8BTB9_THAPS (J domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTB9_THAPS) HSP 1 Score: 197 bits (502), Expect = 1.820e-58 Identity = 101/174 (58.05%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 172 KDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP----FGDMFSHFGF----GGGRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
+D Y++LG+ R A+ EIKKAYR SL++HPDKN E AA +FAE+A AYEVL+DEEK+ YDR GEEGLK+ EQ G F D+FSHFGF G GRRQRE++ TPNV++PLRV+L+QLY GDT + YVR +CV +C K ++CQGPG+ VRM Q+ PGFVQQV
Sbjct: 27 QDFYKLLGITRKATQKEIKKAYRSKSLEFHPDKNKEEGAAEKFAEIAYAYEVLTDEEKKGIYDRHGEEGLKQHEQRGGXXXXHGGFDDIFSHFGFNFGGGQGRRQREQT-TPNVDVPLRVTLKQLYLGDTIEVEYVRNTLCVNWQECMKANQECQGPGVKVRMQQIAPGFVQQV 199
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A0G4GG88_VITBC (J domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG88_VITBC) HSP 1 Score: 194 bits (494), Expect = 2.510e-57 Identity = 100/204 (49.02%), Postives = 137/204 (67.16%), Query Frame = 1
Query: 79 TKSAVCGSWVGRLQWSCFLALAGLVVLVSGQ-----KDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADPFGDMFSHFGFGGGRRQR---EESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQ 666
++S C W+ L L L+VL+S +D Y++LG+ + +S+SEIKKAYR+LS+KYHPDKNP ++A+ +FAE+A AYE+LSD+EKR YD GEEGLK+ Q DPF D+FS FGFGGGRR E+ +TPN+++ LRV+L QLY G+ F Y RQ +CV +C + +DCQG G+ V Q+GPGF+ Q
Sbjct: 4 SRSIACPPWLVSL-------LLPLIVLLSATLSQCGRDFYKILGVKKESSASEIKKAYRKLSMKYHPDKNPEKEASKKFAEIAEAYEILSDDEKRSIYDNHGEEGLKQQHQESHMDPF-DIFSAFGFGGGRRXXXXXEKEKTPNLDMKLRVTLEQLYFGELFHVTYRRQVLCVNVDECTVDRRDCQGAGLRVVTQQMGPGFIVQ 199
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A7S0GKJ3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKJ3_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.140e-56 Identity = 97/179 (54.19%), Postives = 125/179 (69.83%), Query Frame = 1
Query: 148 LVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQGGSADP----FGDMFSHFGFGGGRRQREE-SRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
+ +L+ + D Y+ LG+ R A+ EIKKAYR SL++HPDKN +E AA +F E++ AYEVLSDEEKR YD GEEGLKR E G F D+FSHFGFGG +RQ + RTP+VEIPLR++L+Q+YEG + YVRQ +C+ C K K+CQGPG+ V+M Q+ PGFVQQV
Sbjct: 7 VALLILARADFYDDLGISRKATLKEIKKAYRSKSLEFHPDKNKAEGAADKFGEISRAYEVLSDEEKRQIYDERGEEGLKRHEDGXXXXXXXXXFDDIFSHFGFGGRQRQDDGVQRTPSVEIPLRLTLQQMYEGVELEVDYVRQTLCMNWEMCMKTSKECQGPGVKVKMQQIAPGFVQQV 185
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Match: A0A4D9DAZ8_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAZ8_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.490e-56 Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 133 LALAGLVVLVSGQKDLYEVLGLGRGASSSEIKKAYRQLSLKYHPDKNPSEDAAARFAEVASAYEVLSDEEKRDTYDRFGEEGLKRTEQG---GSADPFGD-MFSHFGFGG----GRRQREESRTPNVEIPLRVSLRQLYEGDTFDTVYVRQAMCVGAGQCEKNCKDCQGPGIAVRMHQLGPGFVQQV 669
L L ++ G +D Y+ LG+ R AS SEIKKA+R+LSL HPDKN S DA +FA ++AY VLS+EE+R+ YDR GEEGLKR E GS DPFG +F FGFGG GRR+ EE++TPNV IPLRVSL+QL+ GD + Y+RQ +C+ +C K +CQGPG+ +R L PGF+QQV
Sbjct: 5 LCLLIFILRGHGAEDYYKTLGIKRSASQSEIKKAWRKLSLDLHPDKNNSPDAQEKFATASNAYTVLSNEERREVYDREGEEGLKRMEAREAQGSMDPFGGGIFEAFGFGGFGGGGRRRDEEAKTPNVVIPLRVSLKQLFTGDLLEVTYIRQVLCMNHKECTKPAPECQGPGVRLRQQHLAPGFIQQV 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13573.2834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13573.2834.1 >prot_Ecto-sp13_S_contig13573.2834.1 ID=prot_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp MAVMRDQQGAATRSRRRRGGSGGTATTKSAVCGSWVGRLQWSCFLALAGLback to top mRNA from alignment at Ecto-sp13_S_contig13573:2024..4684+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13573.2834.1 ID=mRNA_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2661bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13573:2024..4684+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13573:2024..4684+ >mRNA_Ecto-sp13_S_contig13573.2834.1 ID=mRNA_Ecto-sp13_S_contig13573.2834.1|Name=mRNA_Ecto-sp13_S_contig13573.2834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13573:2024..4684+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |