prot_Ecto-sp13_S_contig13566.2830.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13566.2830.1
Unique Nameprot_Ecto-sp13_S_contig13566.2830.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 2.620e-97
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPP+QAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI
Sbjct:  286 LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPVQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 431          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2UTP6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTP6_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.740e-74
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 0
Query:    2 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            +++PAVQEEGR RV IN+K  A FS KLF +N++ KVPVPPNTA+C IH G+GRA+YEPEQRAIVWR++R  GG+E + TADVEL PS R K WSRPPIQ EFQVPMFT+SGV VRFL+V+DKSGY+T RWVRYITRAG+YQIRI
Sbjct:   61 QVVPAVQEEGRSRVAINMKALAKFSNKLFATNVIFKVPVPPNTAKCKIHTGTGRARYEPEQRAIVWRVRRFAGGSEQLLTADVELMPSTRKKTWSRPPIQLEFQVPMFTASGVYVRFLRVFDKSGYVTNRWVRYITRAGNYQIRI 205          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.880e-74
Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 0
Query:    2 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            RI+PAVQEEGR RVTINLK SA FSYKLF  N+V+KVPVP NTARC + V SGRAKYEPEQRAIVWRIKR  G  E  F+ADVELTPSIR KAWSRPPIQAEF V MFT+SGV VRFL+VYDKSGY T RWVRY+TRAGHYQ+RI
Sbjct:  308 RIVPAVQEEGRTRVTINLKCSAQFSYKLFAENVVIKVPVPNNTARCRVKVTSGRAKYEPEQRAIVWRIKRFAGMTECTFSADVELTPSIREKAWSRPPIQAEFVVNMFTASGVHVRFLRVYDKSGYTTNRWVRYMTRAGHYQVRI 452          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 219 bits (558), Expect = 1.890e-67
Identity = 101/145 (69.66%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    2 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            +++PAVQEEGR RV+I +KV   F  KL+ +N+V+K+PVPPNTA+C IH   GRA+YEPEQRAIVWR +R  GGAEA+ +ADVEL  SIR K WSRPPI  EFQVPMFT+SGV VRFL+V+DKSGY+T RWVRYITRAG+YQIRI
Sbjct:  289 QVVPAVQEEGRSRVSITVKVMGKFGQKLYATNVVIKIPVPPNTAKCKIHCAVGRARYEPEQRAIVWRTRRFTGGAEAMLSADVELMASIRPKPWSRPPISLEFQVPMFTASGVHVRFLRVFDKSGYVTNRWVRYITRAGNYQIRI 433          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S0AFK6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AFK6_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.930e-64
Identity = 102/146 (69.86%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    2 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            RIIPAVQEE G  RV+INLKV A+FS KLF +++V+KVPVP NTA+  I    GRAKYEPEQ+AI+WR+KR  G AE + +ADV+L P+ R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:  103 RIIPAVQEEQGNTRVSINLKVIANFSDKLFATHVVIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIIWRVKRFPGKAECMLSADVDLMPTTRAKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGSYQIRI 248          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2RWQ5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RWQ5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.320e-61
Identity = 96/147 (65.31%), Postives = 122/147 (82.99%), Query Frame = 0
Query:    2 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGS-GRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            R+IPAVQEE G+ +++INLKV A+FS KL  +++V+K+PVP NTA+  I + + GRAKYEPE++AIVWR+K+  G  EA+ +ADV+L P++R KAW+RPPI  EFQVPMFTSSGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:   54 RLIPAVQEEQGQTKISINLKVMANFSEKLNATHVVIKIPVPKNTAKAKIKIHALGRAKYEPEKQAIVWRVKKFPGKHEAMLSADVDLMPTVRAKAWNRPPINVEFQVPMFTSSGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 200          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.840e-61
Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 0
Query:    2 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            RIIPAVQEE G+ +V+INLKV A+FS KLF +++ +KVPVP NTA+  I    GRAKYEPEQ+AIVWR+KR  G AE +  ADV+L P++R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:  319 RIIPAVQEEKGQTKVSINLKVIANFSDKLFATHVAIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIVWRVKRFPGKAECMLAADVDLMPTVRPKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 464          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S1VT68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VT68_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.610e-61
Identity = 101/146 (69.18%), Postives = 120/146 (82.19%), Query Frame = 0
Query:    2 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            RIIPAVQEE G  RV+INLK+ A+FS +LF +++V+K+PVP NTAR  I    GRAKYEPEQ+AIVWR+KR  G AE    A+V+L P++R KAWSRPPI AEFQVPMFT+SGV VRFL+VYDKSGY T+RWVRYIT+AG YQIRI
Sbjct:  312 RIIPAVQEEHGHTRVSINLKIIANFSDQLFATHVVIKIPVPKNTARAKIKALFGRAKYEPEQQAIVWRVKRFPGKAECHINAEVDLMPTVRPKAWSRPPINAEFQVPMFTASGVHVRFLRVYDKSGYHTQRWVRYITKAGTYQIRI 457          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2HE79_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HE79_9STRA)

HSP 1 Score: 193 bits (490), Expect = 6.790e-61
Identity = 92/139 (66.19%), Postives = 113/139 (81.29%), Query Frame = 0
Query:    8 QEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            +++G+ +V+INLKV A+FS KLF +++ +KVPVP NTA+  I    GRAKYEPEQ+AIVWR+KR  G AE +  ADV+L P++R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:    4 RKKGQTKVSINLKVIANFSDKLFATHVAIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIVWRVKRFPGKAECMLAADVDLMPTVRPKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 142          
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: B8BXI4_THAPS (Clathrin adaptor complex subunit n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BXI4_THAPS)

HSP 1 Score: 197 bits (500), Expect = 7.640e-59
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 0
Query:    2 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 146
            ++ PAVQEEG+ + +INLK+ A+FS KLF +++VVK+PVP NT++  I    GRAKYEPEQ AIVWRIKR  G AE + +AD+EL  ++R KAW RPPI  EFQVPMFT+SGV VRFL+V+DKSGY T RWVRYIT+AG YQIRI
Sbjct:  282 KLFPAVQEEGQTKCSINLKMVAEFSEKLFATHVVVKIPVPKNTSKTKIKNSFGRAKYEPEQNAIVWRIKRFPGKAECMLSADLELVRTVRPKAWERPPINVEFQVPMFTASGVHVRFLRVFDKSGYHTNRWVRYITKAGGYQIRI 426          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE2.620e-9799.32MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2UTP6_9STRA3.740e-7472.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z9G3_9STRA3.880e-7479.31Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A6V1NZE4_HETAK1.890e-6769.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0AFK6_9STRA1.930e-6469.86Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2RWQ5_9STRA1.320e-6165.31Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2MKC8_9STRA3.840e-6169.18Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A7S1VT68_9STRA4.610e-6169.18Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2HE79_9STRA6.790e-6166.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8BXI4_THAPS7.640e-5964.83Clathrin adaptor complex subunit n=2 Tax=Thalassio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 3..146
e-value: 2.1E-28
score: 99.5
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..145
score: 21.62
NoneNo IPR availableGENE3D2.60.40.1170coord: 1..108
e-value: 4.8E-28
score: 99.4
NoneNo IPR availablePANTHERPTHR10529:SF236AP-2 COMPLEX SUBUNIT MUcoord: 2..146
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 2..146
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 3..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13566contigEcto-sp13_S_contig13566:3104..4688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13566.2830.1mRNA_Ecto-sp13_S_contig13566.2830.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13566 3104..4688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13566.2830.1 ID=prot_Ecto-sp13_S_contig13566.2830.1|Name=mRNA_Ecto-sp13_S_contig13566.2830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIH
VGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPI
QAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR036168AP2_Mu_C_sf