mRNA_Ecto-sp13_S_contig13566.2830.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig13566.2830.1
Unique NamemRNA_Ecto-sp13_S_contig13566.2830.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 2.620e-97
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 1 
Query:    1 LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPP+QAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI
Sbjct:  286 LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPVQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 431
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2UTP6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTP6_9STRA)

HSP 1 Score: 229 bits (583), Expect = 3.740e-74
Identity = 105/145 (72.41%), Postives = 124/145 (85.52%), Query Frame = 1 
Query:    4 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            +++PAVQEEGR RV IN+K  A FS KLF +N++ KVPVPPNTA+C IH G+GRA+YEPEQRAIVWR++R  GG+E + TADVEL PS R K WSRPPIQ EFQVPMFT+SGV VRFL+V+DKSGY+T RWVRYITRAG+YQIRI
Sbjct:   61 QVVPAVQEEGRSRVAINMKALAKFSNKLFATNVIFKVPVPPNTAKCKIHTGTGRARYEPEQRAIVWRVRRFAGGSEQLLTADVELMPSTRKKTWSRPPIQLEFQVPMFTASGVYVRFLRVFDKSGYVTNRWVRYITRAGNYQIRI 205
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.880e-74
Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 1 
Query:    4 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            RI+PAVQEEGR RVTINLK SA FSYKLF  N+V+KVPVP NTARC + V SGRAKYEPEQRAIVWRIKR  G  E  F+ADVELTPSIR KAWSRPPIQAEF V MFT+SGV VRFL+VYDKSGY T RWVRY+TRAGHYQ+RI
Sbjct:  308 RIVPAVQEEGRTRVTINLKCSAQFSYKLFAENVVIKVPVPNNTARCRVKVTSGRAKYEPEQRAIVWRIKRFAGMTECTFSADVELTPSIREKAWSRPPIQAEFVVNMFTASGVHVRFLRVYDKSGYTTNRWVRYMTRAGHYQVRI 452
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 219 bits (558), Expect = 1.890e-67
Identity = 101/145 (69.66%), Postives = 121/145 (83.45%), Query Frame = 1 
Query:    4 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            +++PAVQEEGR RV+I +KV   F  KL+ +N+V+K+PVPPNTA+C IH   GRA+YEPEQRAIVWR +R  GGAEA+ +ADVEL  SIR K WSRPPI  EFQVPMFT+SGV VRFL+V+DKSGY+T RWVRYITRAG+YQIRI
Sbjct:  289 QVVPAVQEEGRSRVSITVKVMGKFGQKLYATNVVIKIPVPPNTAKCKIHCAVGRARYEPEQRAIVWRTRRFTGGAEAMLSADVELMASIRPKPWSRPPISLEFQVPMFTASGVHVRFLRVFDKSGYVTNRWVRYITRAGNYQIRI 433
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S0AFK6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AFK6_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.930e-64
Identity = 102/146 (69.86%), Postives = 119/146 (81.51%), Query Frame = 1 
Query:    4 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            RIIPAVQEE G  RV+INLKV A+FS KLF +++V+KVPVP NTA+  I    GRAKYEPEQ+AI+WR+KR  G AE + +ADV+L P+ R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:  103 RIIPAVQEEQGNTRVSINLKVIANFSDKLFATHVVIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIIWRVKRFPGKAECMLSADVDLMPTTRAKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGSYQIRI 248
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2RWQ5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RWQ5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.320e-61
Identity = 96/147 (65.31%), Postives = 122/147 (82.99%), Query Frame = 1 
Query:    4 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGS-GRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            R+IPAVQEE G+ +++INLKV A+FS KL  +++V+K+PVP NTA+  I + + GRAKYEPE++AIVWR+K+  G  EA+ +ADV+L P++R KAW+RPPI  EFQVPMFTSSGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:   54 RLIPAVQEEQGQTKISINLKVMANFSEKLNATHVVIKIPVPKNTAKAKIKIHALGRAKYEPEKQAIVWRVKKFPGKHEAMLSADVDLMPTVRAKAWNRPPINVEFQVPMFTSSGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 200
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.840e-61
Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1 
Query:    4 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            RIIPAVQEE G+ +V+INLKV A+FS KLF +++ +KVPVP NTA+  I    GRAKYEPEQ+AIVWR+KR  G AE +  ADV+L P++R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:  319 RIIPAVQEEKGQTKVSINLKVIANFSDKLFATHVAIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIVWRVKRFPGKAECMLAADVDLMPTVRPKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 464
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S1VT68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VT68_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.610e-61
Identity = 101/146 (69.18%), Postives = 120/146 (82.19%), Query Frame = 1 
Query:    4 RIIPAVQEE-GRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            RIIPAVQEE G  RV+INLK+ A+FS +LF +++V+K+PVP NTAR  I    GRAKYEPEQ+AIVWR+KR  G AE    A+V+L P++R KAWSRPPI AEFQVPMFT+SGV VRFL+VYDKSGY T+RWVRYIT+AG YQIRI
Sbjct:  312 RIIPAVQEEHGHTRVSINLKIIANFSDQLFATHVVIKIPVPKNTARAKIKALFGRAKYEPEQQAIVWRVKRFPGKAECHINAEVDLMPTVRPKAWSRPPINAEFQVPMFTASGVHVRFLRVYDKSGYHTQRWVRYITKAGTYQIRI 457
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: A0A7S2HE79_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HE79_9STRA)

HSP 1 Score: 193 bits (490), Expect = 6.790e-61
Identity = 92/139 (66.19%), Postives = 113/139 (81.29%), Query Frame = 1 
Query:   22 QEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            +++G+ +V+INLKV A+FS KLF +++ +KVPVP NTA+  I    GRAKYEPEQ+AIVWR+KR  G AE +  ADV+L P++R KAWSRPPI  EFQVPMFT+SGV VRFL+VYDKSGY T RWVRYIT+AG YQIRI
Sbjct:    4 RKKGQTKVSINLKVIANFSDKLFATHVAIKVPVPKNTAKAKIKNSFGRAKYEPEQQAIVWRVKRFPGKAECMLAADVDLMPTVRPKAWSRPPINVEFQVPMFTASGVHVRFLRVYDKSGYHTNRWVRYITKAGGYQIRI 142
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BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Match: B8BXI4_THAPS (Clathrin adaptor complex subunit n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BXI4_THAPS)

HSP 1 Score: 197 bits (500), Expect = 7.640e-59
Identity = 94/145 (64.83%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:    4 RIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIHVGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPIQAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI 438
            ++ PAVQEEG+ + +INLK+ A+FS KLF +++VVK+PVP NT++  I    GRAKYEPEQ AIVWRIKR  G AE + +AD+EL  ++R KAW RPPI  EFQVPMFT+SGV VRFL+V+DKSGY T RWVRYIT+AG YQIRI
Sbjct:  282 KLFPAVQEEGQTKCSINLKMVAEFSEKLFATHVVVKIPVPKNTSKTKIKNSFGRAKYEPEQNAIVWRIKRFPGKAECMLSADLELVRTVRPKAWERPPINVEFQVPMFTASGVHVRFLRVFDKSGYHTNRWVRYITKAGGYQIRI 426
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13566.2830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE2.620e-9799.32MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2UTP6_9STRA3.740e-7472.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z9G3_9STRA3.880e-7479.31Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A6V1NZE4_HETAK1.890e-6769.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0AFK6_9STRA1.930e-6469.86Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2RWQ5_9STRA1.320e-6165.31Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2MKC8_9STRA3.840e-6169.18Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A7S1VT68_9STRA4.610e-6169.18Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2HE79_9STRA6.790e-6166.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8BXI4_THAPS7.640e-5964.83Clathrin adaptor complex subunit n=2 Tax=Thalassio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13566contigEcto-sp13_S_contig13566:3104..4688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score296.2
Seed ortholog evalue8.4e-78
Seed eggNOG ortholog2880.D8LRL7
Preferred nameAP2M1
Model size441
KEGG koko:K11826
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0002090,GO:0002092,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005905,GO:0006403,GO:0006807,GO:0006810,GO:0006886,GO:0006897,GO:0006898,GO:0006900,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009653,GO:0009893,GO:0009987,GO:0010008,GO:0010171,GO:0010604,GO:0010646,GO:0010647,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016055,GO:0016185,GO:0016192,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019904,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030100,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030163,GO:0030424,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031201,GO:0031323,GO:0031325,GO:0031410,GO:0031623,GO:0031982,GO:0032501,GO:0032502,GO:0032535,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033227,GO:0033267,GO:0033365,GO:0034381,GO:0034383,GO:0034613,GO:0035567,GO:0036019,GO:0036020,GO:0036465,GO:0042277,GO:0042886,GO:0042995,GO:0043005,GO:0043112,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043679,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044306,GO:0044325,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045334,GO:0045807,GO:0046907,GO:0048002,GO:0048013,GO:0048259,GO:0048260,GO:0048475,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050657,GO:0050658,GO:0050690,GO:0050708,GO:0050714,GO:0050750,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051236,GO:0051239,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0060071,GO:0060255,GO:0060341,GO:0060627,GO:0061024,GO:0061356,GO:0061357,GO:0061512,GO:0065003,GO:0065007,GO:0065008,GO:0070142,GO:0070201,GO:0070325,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0090066,GO:0090087,GO:0090175,GO:0097006,GO:0097458,GO:0097479,GO:0097480,GO:0097494,GO:0097499,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098693,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099003,GO:0099503,GO:0099504,GO:0120025,GO:0120038,GO:0150034,GO:0198738,GO:1900242,GO:1900244,GO:1901564,GO:1901565,GO:1901575,GO:1903076,GO:1903077,GO:1903421,GO:1903423,GO:1903530,GO:1903532,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1904951,GO:1905114,GO:1905330,GO:1905475,GO:1905476,GO:1990075,GO:2000026,GO:2000027
Exons3
EggNOG free text desc.endocytosis
EggNOG OGsKOG0938@1,KOG0938@2759
Cds size441
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462724.621112-CDS-Ecto-sp13_S_contig13566:3103..32411681462724.621112-CDS-Ecto-sp13_S_contig13566:3103..3241Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13566 3104..3241 -
1681462724.6374123-CDS-Ecto-sp13_S_contig13566:3922..41141681462724.6374123-CDS-Ecto-sp13_S_contig13566:3922..4114Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13566 3923..4114 -
1681462724.6527429-CDS-Ecto-sp13_S_contig13566:4577..46881681462724.6527429-CDS-Ecto-sp13_S_contig13566:4577..4688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig13566 4578..4688 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13566.2830.1prot_Ecto-sp13_S_contig13566.2830.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig13566 3104..4688 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig13566.2830.1

>prot_Ecto-sp13_S_contig13566.2830.1 ID=prot_Ecto-sp13_S_contig13566.2830.1|Name=mRNA_Ecto-sp13_S_contig13566.2830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
LRIIPAVQEEGRGRVTINLKVSADFSYKLFGSNIVVKVPVPPNTARCLIH
VGSGRAKYEPEQRAIVWRIKRMIGGAEAVFTADVELTPSIRGKAWSRPPI
QAEFQVPMFTSSGVQVRFLKVYDKSGYLTKRWVRYITRAGHYQIRI*
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mRNA from alignment at Ecto-sp13_S_contig13566:3104..4688-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig13566.2830.1 ID=mRNA_Ecto-sp13_S_contig13566.2830.1|Name=mRNA_Ecto-sp13_S_contig13566.2830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13566:3104..4688- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCGGATAATACCTGCAGTGCAGGAGGAGGGAAGGGGTCGCGTCACCAT
TAACCTCAAGGTCTCTGCGGACTTCAGCTACAAGCTCTTCGGCAGCAACA
TTGTGGTGAAGGTGTGCAATTGTGTGTACATGCGCGGGGGCTCCGTGAGT
GAGTGGGGCGTTAACCTAGGGAGCACCCTAATCGTCGAGAGGATTGTAGG
GTTAGAAGCTTCTGAGAGACTGCTTGCATGCGGAAGAACTCTTGTGCGCG
GTGAGCGGCGTCTGTGTAACACCAGGAGCGGTTACCGTGAAATTGTTGTT
CTGTGATCCTGCTGTGGCAGCAGCGTGAGTGCCCCACGTACACTATGCGC
CACAGGTACCGCCACAATACACAATATAGGACACGCGTACCCCCGAAACA
AAATACAACGACGACAGCCACGTACGGAAGTTTCCGCCAGCCACCACTCG
AGCGAAGTCAACCCCTTGAATACCATGCCGCTCTTTGTCGATTTGGCAGC
AGGAAACTTCTCTCCATGCGGCCTCTAAACCACCACCCCGCTACCGCCGC
TTCACGCCTCCCCTCTGTCCCCAGGTGCCAGTTCCTCCGAACACGGCGCG
ATGCCTCATCCACGTGGGGTCGGGCAGGGCTAAGTACGAGCCGGAGCAGC
GGGCTATCGTGTGGCGGATCAAGCGCATGATCGGTGGTGCGGAGGCGGTG
TTTACGGCCGACGTGGAACTGACCCCAAGCATCCGGGGGAAGGCGTGGTC
ACGGCCTCCCATACAGGTGGGTGTGTTGGAGGGTCCCTGGAAAAAAAGAC
GCACGGAAGGAATGGGATCACGCCGGAAGATGCTGATTGGCATGGGTGGA
GAGGAAAACAAACATGGACAGGCTTGCGTGCCATAGGGCCGACCCGAACG
CTTGTTGTTTGACTCCGCATGCCTCCCTCCATGGGCCGCGTTCGCGAGGG
TAATAAGTTGACGAGGAAATAGAACAGGGAGGGGGGTACCCAGACCTTGT
CCCTAATCTTAATCCAGCTTACCCGGTTGCATCCTCCGTCCAATAGACTA
TGTTTGCTTTGACGAAAAAAACTCCGAAGGCTGCTGCCGTTCACTTCGTT
CGGGTTCGACATGGCGCGTACCACGAGGCTGTTTTAGTCGTGGTTCACCC
CGCACCTCGACGCGTTACTTCGAAGACAATCTCCCCCCTTCTGCGTCTGG
CTTCGCCGGTAGCGAAGTACAGCCGTGTTGTTTGCGTTCTGGCGCACACG
GCTTCGGTACACAGCACGTCCAGCACGTGTGGGCGTGGGAAAACCTACTC
ATGTGCTATCATGGTTCTTGACCGGCCTCCTTGCTTGCATACATTTTATA
ATGATGTTCCATCTCCCCCCTATCCTACCCTGACGTTTGTCCTGGGTATC
GTCTTGTTTGGCATTTTGTACTGCGCGCTACGATATGAATGCCACAGGCG
GAGTTCCAGGTGCCGATGTTCACGTCGTCTGGGGTACAGGTCCGCTTCCT
CAAGGTGTACGATAAGAGCGGTTACCTCACCAAGCGATGGGTCCGGTACA
TCACACGCGCAGGCCACTACCAGATCCGCATCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13566:3104..4688-

>mRNA_Ecto-sp13_S_contig13566.2830.1 ID=mRNA_Ecto-sp13_S_contig13566.2830.1|Name=mRNA_Ecto-sp13_S_contig13566.2830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=441bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13566:3104..4688- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCGGATAATACCTGCAGTGCAGGAGGAGGGAAGGGGTCGCGTCACCAT
TAACCTCAAGGTCTCTGCGGACTTCAGCTACAAGCTCTTCGGCAGCAACA
TTGTGGTGAAGGTGCCAGTTCCTCCGAACACGGCGCGATGCCTCATCCAC
GTGGGGTCGGGCAGGGCTAAGTACGAGCCGGAGCAGCGGGCTATCGTGTG
GCGGATCAAGCGCATGATCGGTGGTGCGGAGGCGGTGTTTACGGCCGACG
TGGAACTGACCCCAAGCATCCGGGGGAAGGCGTGGTCACGGCCTCCCATA
CAGGCGGAGTTCCAGGTGCCGATGTTCACGTCGTCTGGGGTACAGGTCCG
CTTCCTCAAGGTGTACGATAAGAGCGGTTACCTCACCAAGCGATGGGTCC
GGTACATCACACGCGCAGGCCACTACCAGATCCGCATCTGA
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