prot_Ecto-sp13_S_contig13552.2819.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13552.2819.1
Unique Nameprot_Ecto-sp13_S_contig13552.2819.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: A0A6H5JSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG4_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 3.340e-37
Identity = 98/227 (43.17%), Postives = 125/227 (55.07%), Query Frame = 0
Query:    3 EVKIGKTTKKSLNGDVATNYPPLLLSTFDFIATDTDFTSSHYSCYTDDASVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKTFQANKIIVKRPRSRSVDSADFPAGARESPDWESAFRGDNSASAPPALPPRGLGSARPVGLPTSAAHTSIRGHPQQNSTSSPHFGNDP-SFRRPVVFDVPRR 228
            ++ IGKTTKK L+G   T +P L +ST   +  +T   SS Y+ Y             A G L L +RQGPFSLT ++E+SP D G+F GN+GGFWELL+V+W +LF    + RTP+L+ R+FI   Q  K IV R RS SVDS        E P   S F G++    PPALPPR  G     G  ++A            ST SP   + P S +RPVV DVPRR
Sbjct:  119 DLTIGKTTKKMLDGSSTTVFPALTISTTTTVIQETSLPSSTYAEY-------------ALGYLKLMVRQGPFSLTSVEEVSPLDVGSFFGNLGGFWELLLVLWGLLFFATRQDRTPQLRARNFI---QPLKEIVARRRSLSVDSGASIVQPEELPQERSFFGGNH----PPALPPRPRGGNTMPGGRSTAVGV---------STMSPATLSSPVSSQRPVVEDVPRR 316          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: D7FTW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW4_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 5.190e-18
Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    6 IGKTTKKSLNGDVATNYPPLLLSTFDFIATDTDFTSSHYSCYTDDASVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFW 98
            IGKTTKK LNGDV T +PPL+LS+ DF A +T  TS       DD+       D +FGRL L I+QG +S T I E+ P D G FLGN+GGFW
Sbjct:  119 IGKTTKKKLNGDVTTTFPPLVLSSSDFTAENTWATSE------DDSF-----QDASFGRLYLDIKQGDYSRTAIAEVDPLDIGTFLGNIGGFW 200          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: A0A6H5JND4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND4_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.030e-9
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
Query:   67 LRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKTFQ 130
            LRI+QGP SL  I E SP   G  LG++GGFW++L+++W + F+ V +Q  P LK RDF K+ Q
Sbjct:  279 LRIKQGPNSLEFITEDSPVSIGELLGDIGGFWDVLLLLWPVFFVVVSQQ-DPTLKPRDFRKSLQ 341          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.350e-9
Identity = 40/113 (35.40%), Postives = 57/113 (50.44%), Query Frame = 0
Query:   55 SAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKT-------FQANKIIVKRPRSRSVDSADFPAGARESPDWE 160
            +AA D  + +L L+ +Q P SL  I E  PFD     GN+GGFW+LL++VW I F+    Q  P LK R+F K+        +  +++    R    D +  P    E P WE
Sbjct:  244 NAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQ-DPHLKPRNFKKSVAKGLEGLRIGELVTAGTRK---DGSSNPEDEEEKPHWE 352          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: A0A6H5K6D1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6D1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.230e-8
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   55 SAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKT 128
            +AA D  + +L L+ +Q P SL  I E  PFD     GN+GGFW+LL++VW I F+    Q  P LK R+F K+
Sbjct:  201 NAAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQ-DPHLKPRNFKKS 273          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: D7G5W1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5W1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.460e-8
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0
Query:   67 LRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKTFQ 130
            LRI+QGP SL  I E +P   G  LG++GGFW++L+++W + F+ V ++  P LK R+F K+ Q
Sbjct:  138 LRIKQGPNSLETITEDAPVTIGELLGDIGGFWDILLLLWPVFFVVVSQEE-PTLKPRNFRKSLQ 200          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: A0A6H5JF84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF84_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 2.480e-8
Identity = 38/126 (30.16%), Postives = 61/126 (48.41%), Query Frame = 0
Query:    4 VKIGKTTKKSLNGDVATNYPPLLLSTFDFIATDTDFTSSHYSCYTDDASVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKTF 129
            V IG T +    GD+ ++Y  + +++                 Y D A      P   + RL + ++Q   S   I E  PF+F   LGN+GGFW+L++++W + F+    Q  P LK R+F K+F
Sbjct:   47 VGIGLTNQIKYTGDIISSYKAVSINS---------------GVYKDQADGDITKP---YARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAAS-QPEPNLKPRNFAKSF 153          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 7.620e-8
Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 0
Query:   52 SVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKTF-QANKIIVKRPRSRSVDSADFPAGARESPDWESAFRGDNSASAPPA 174
            ++T  A   A+  L + I Q   SL  I E++P +     GN+GGFW+LL+++W I FI+   Q  P LKVR+F K+  + ++++V   R  +  S + P   R  P    +         PPA
Sbjct:  241 NITGIASPYAW--LSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQ-DPHLKVRNFKKSVTRGSEVVVDLSRRVNSASIEIPHPLRRQPGSRQSNATGEDGEPPPA 361          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.720e-7
Identity = 41/127 (32.28%), Postives = 61/127 (48.03%), Query Frame = 0
Query:    2 TEVKIGKTTKKSLNGDVATNYPPLLLSTFDFIATDTDFTSSHYSCYTDDASVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKT 128
            T V IG TT+  L  +   N   L +ST               +   D+ +     P   + +L L+++Q P SL  I E+ P D     GN+GGFW+LL+++W I F+    Q  P LK R+F K+
Sbjct:  248 TYVGIGVTTEDKLGQEPIVNNKALSVST---------------ATVKDEVNPAIVKP---YAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQ-DPHLKPRNFKKS 355          
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.260e-7
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   62 FGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWELLIVVWAILFITVDEQRTPKLKVRDFIKT 128
            + +L L+ +Q P SL  I E+ P D     GN+GGFW+LL+++W I F+    Q  P LK R+F K+
Sbjct:  322 YAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQ-DPHLKPRNFTKS 387          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13552.2819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JSG4_9PHAE3.340e-3743.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTW4_ECTSI5.190e-1853.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JND4_9PHAE1.030e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD2_ECTSI2.350e-935.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K6D1_9PHAE1.230e-844.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5W1_ECTSI1.460e-845.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF84_9PHAE2.480e-830.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU23_ECTSI7.620e-832.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K474_9PHAE1.720e-732.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD1_ECTSI3.260e-741.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 113..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13552contigEcto-sp13_S_contig13552:801..3171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13552.2819.1mRNA_Ecto-sp13_S_contig13552.2819.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13552 639..4550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13552.2819.1 ID=prot_Ecto-sp13_S_contig13552.2819.1|Name=mRNA_Ecto-sp13_S_contig13552.2819.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
MTEVKIGKTTKKSLNGDVATNYPPLLLSTFDFIATDTDFTSSHYSCYTDD
ASVTSAAPDLAFGRLLLRIRQGPFSLTHIKELSPFDFGAFLGNMGGFWEL
LIVVWAILFITVDEQRTPKLKVRDFIKTFQANKIIVKRPRSRSVDSADFP
AGARESPDWESAFRGDNSASAPPALPPRGLGSARPVGLPTSAAHTSIRGH
PQQNSTSSPHFGNDPSFRRPVVFDVPRRDFSPAGQEPLGDADMSAV*
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