prot_Ecto-sp13_S_contig1355.2817.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1355.2817.1
Unique Nameprot_Ecto-sp13_S_contig1355.2817.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: D8LEU3_ECTSI (Trafficking protein particle complex subunit 2-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEU3_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.010e-103
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDV+GERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS
Sbjct:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVVGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: A0A836CHF0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHF0_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.570e-51
Identity = 79/153 (51.63%), Postives = 108/153 (70.59%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAE-GEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGA---ADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MIVC+A+I + N PL +RTY D   GE++ D  +R H+IVH+SLDV+ E + G +           + DMFLGHLCP+DEY VYGY+TST++K+LAVLE+    R+ EL  +  T+H FYVNY  NPFSPL +P+ S +F+L+VDRQ+N YN+
Sbjct:    1 MIVCLAVISKANAPLLVRTYVDPSLGEDQADTTIRFHHIVHTSLDVVQEARAGDRHVPACRRWCAATRDMFLGHLCPMDEYEVYGYVTSTQVKILAVLEETVTSRKSELAALLHTIHGFYVNYQLNPFSPLNQPIGSERFKLAVDRQVNGYNA 153          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: W7T3S0_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3S0_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.510e-37
Identity = 71/152 (46.71%), Postives = 99/152 (65.13%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVG---RKGASGAADVST-DMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYN 148
            MI CIA++G++NE L+L+ +  A+ +   D  L  H I HS+LD   ER      R   S  +  ST DMFLG+LCPI+E+RVYGY TST++K LA+L + N +RE +LK VF  +H  YV+YL++PFSPL   + S +F   V+RQ+  YN
Sbjct:    1 MIACIAVVGKKNELLYLKPFL-AQPDASSDYFLSFHFIAHSALDAFDERSKSVSRRPSPSFPSPASTNDMFLGYLCPIEEFRVYGYKTSTQIKFLAILTENNPVRENDLKSVFQGLHILYVSYLQSPFSPLTGKITSERFSKGVERQVVVYN 151          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: A0A8K1FMJ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMJ4_PYTOL)

HSP 1 Score: 125 bits (314), Expect = 3.820e-34
Identity = 69/149 (46.31%), Postives = 97/149 (65.10%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PLF+RT+       EED +L  H I H +LD+I E KV  +GAS  A    DM+LG L PI++YRVYGY+T+T +KL+A+LED + +RE EL+  FS +H  YVN + NPF+P+ + + S +F   V   +  +NS
Sbjct:    1 MISCVAVIGAANSPLFIRTF-------EEDEDLGFHYIAHVALDII-EEKV--RGASNIA-AKDDMYLGFLGPIEDYRVYGYVTNTSVKLVAILED-SPVRESELRSFFSELHKLYVNAVSNPFAPIGERITSQQFDKKVYNLVLQHNS 137          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: D0N1W2_PHYIT (Trafficking protein particle complex subunit 2-like protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=D0N1W2_PHYIT)

HSP 1 Score: 120 bits (300), Expect = 5.190e-32
Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PL++RT+    GEE ED  L  H I H SLDVI E+  G    +G      DM+LG L PI++YRVYGY+T+T +K + VL+D   +RE EL+  F+ VH  YVN + NPF+PL + + S  F   V   +  +N+
Sbjct:    1 MIACVAVIGAANSPLYIRTF----GEEGED--LGFHYIAHVSLDVIEEKLRG----AGITSSKDDMYLGFLGPIEDYRVYGYVTNTSVKFVVVLQDA-PVRESELRPFFAEVHRLYVNAMSNPFAPLGERLTSQTFDKRVSNLVVQHNT 138          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: K3WRF7_GLOUD (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRF7_GLOUD)

HSP 1 Score: 118 bits (295), Expect = 2.960e-31
Identity = 63/149 (42.28%), Postives = 94/149 (63.09%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            MI C+A+IG  N PL++RT+     +EEED  L  H I H SLD+I E K+   G   A D   DM+LG L PI++YRVYGY+T+T +K +A+++D + +RE EL+  F+ +H  YVN + NPF+P+ + + S  F   V   +  +N+
Sbjct:    1 MISCVAVIGAANSPLYVRTF-----DEEED--LGFHYIAHVSLDII-EEKLRSAGIMAAKD---DMYLGFLGPIEDYRVYGYVTNTSIKFVAIMQD-SPVRESELRSFFAEMHKMYVNAMSNPFAPIGERITSQNFEKKVYNLVLQHNT 137          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: A0A7S2WDT6_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDT6_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.030e-30
Identity = 58/154 (37.66%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    2 IVCIAIIGRQNEPLFLRTYTDAEGE-------EEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIRE--PELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQIND 146
            I C++++GR NEPLF+R Y   E          E+DA LR H ++H+SLDV+ E+    +  S  A   T MFLG+LCP+DE+ +YGY+T+T  KL+  LED         ++  +F  +H+  +    NPF+PL K V S  F+  +D+ + +
Sbjct:   15 IACVSVVGRTNEPLFMRVYASEEAPFDALNPGSEQDA-LRFHYMIHASLDVVDEKHRPPRTESSPAPTKTSMFLGYLCPVDEFHLYGYVTNTHNKLIVALEDQAGTGGGIADMTGLFKRIHDLLIKQALNPFAPLGKVVASTNFQNGIDKLVQE 167          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: W4GM96_9STRA (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GM96_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.840e-30
Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYN 148
            MI C+AI+G  N PLF+R Y        ED +L  H + H +LD++ ER    K          DM+LG L P++++RVYGY+T+T +KLLA+++D   ++E +++  FS +HN YVN + NPF+ L + + SAKF   V   +  +N
Sbjct:    1 MIACVAIVGANNNPLFVRAYA-------EDDDLSFHYVAHIALDIVEERVKQSKD---------DMYLGFLGPVEDFRVYGYVTNTLVKLLAIVQDT-PMKESDMRAFFSVMHNLYVNAMSNPFAVLGERIASAKFDRQVTSLVLQHN 131          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: A0A7S3U8L7_9SPIT (Trafficking protein particle complex subunit 2-like protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U8L7_9SPIT)

HSP 1 Score: 113 bits (282), Expect = 3.440e-29
Identity = 58/145 (40.00%), Postives = 91/145 (62.76%), Query Frame = 0
Query:    1 MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDS-AKFRLSVDRQI 144
            MIV +A++GR+N PL++R +   E   +  A LR H IVH+++D I E+    K + G      DM+LG L PI+EYRVYGYMT++R+KL+ VL+D  ++++ E++ +F  +H  YV+ + NPF  L   ++  A F   V R +
Sbjct:    1 MIVAVAVLGRENNPLYMRAF--GELSMDSTATLRFHFIVHAAIDYIEEKLGQAKTSPGNTAPKLDMYLGFLYPIEEYRVYGYMTNSRVKLITVLDD-EEVKDSEMRALFRRLHTLYVDTISNPFHKLDSELNGCASFEKQVGRVV 142          
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Match: A0A0G4ISZ6_PLABS (Trafficking protein particle complex subunit 2-like protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISZ6_PLABS)

HSP 1 Score: 112 bits (280), Expect = 9.120e-29
Identity = 57/151 (37.75%), Postives = 93/151 (61.59%), Query Frame = 0
Query:    1 MIVCIAIIGRQ--NEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERKVGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDIREPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS 149
            +I C+A++G Q  + PLF+R + + +        L+ H  VH ++D+I E+    +G S A     D +LG+LCPIDEY+VYGYMT + +K + V++DV  +R+ ++K +F  +HN YV+ L NPF+   KP+ S +F   VD+ I  + +
Sbjct:    7 VIACLAVLGNQPTHNPLFVRVFGERDA-------LQFHYFVHCAVDIIEEKVQSSRGVSPAP---FDKYLGYLCPIDEYKVYGYMTVSDIKFIVVVQDVF-VRDSDMKGLFRWLHNLYVDTLMNPFAEPGKPITSRRFCGEVDKVIGSHEN 146          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1355.2817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU3_ECTSI1.010e-10399.33Trafficking protein particle complex subunit 2-lik... [more]
A0A836CHF0_9STRA4.570e-5151.63Trafficking protein particle complex subunit 2-lik... [more]
W7T3S0_9STRA1.510e-3746.71Trafficking protein particle complex subunit 2-lik... [more]
A0A8K1FMJ4_PYTOL3.820e-3446.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N1W2_PHYIT5.190e-3244.30Trafficking protein particle complex subunit 2-lik... [more]
K3WRF7_GLOUD2.960e-3142.28Trafficking protein particle complex subunit 2-lik... [more]
A0A7S2WDT6_9STRA2.030e-3037.66Trafficking protein particle complex subunit 2-lik... [more]
W4GM96_9STRA8.840e-3039.19Trafficking protein particle complex subunit 2-lik... [more]
A0A7S3U8L7_9SPIT3.440e-2940.00Trafficking protein particle complex subunit 2-lik... [more]
A0A0G4ISZ6_PLABS9.120e-2937.75Trafficking protein particle complex subunit 2-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.70coord: 1..148
e-value: 2.2E-35
score: 123.1
NoneNo IPR availablePANTHERPTHR12403:SF11TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2-LIKE PROTEINcoord: 1..148
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..142
e-value: 6.8E-25
score: 87.7
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403MBP-1 INTERACTING PROTEIN-2Acoord: 1..148
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1355contigEcto-sp13_S_contig1355:1854..3868 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1355.2817.1mRNA_Ecto-sp13_S_contig1355.2817.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1355 1854..3868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1355.2817.1 ID=prot_Ecto-sp13_S_contig1355.2817.1|Name=mRNA_Ecto-sp13_S_contig1355.2817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
MIVCIAIIGRQNEPLFLRTYTDAEGEEEEDANLRLHNIVHSSLDVIGERK
VGRKGASGAADVSTDMFLGHLCPIDEYRVYGYMTSTRLKLLAVLEDVNDI
REPELKRVFSTVHNFYVNYLRNPFSPLAKPVDSAKFRLSVDRQINDYNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006722Sedlin
IPR011012Longin-like_dom_sf