mRNA_Ecto-sp13_S_contig13542.2812.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 187 bits (476), Expect = 4.270e-53 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 1
Query: 1 EELHALAEELQRVKRDRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQV 306
EELHALAEELQRVKRDR GQE REVSRE WGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQ+
Sbjct: 5218 EELHALAEELQRVKRDRDGQEGREVSRELWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQI 5319
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 9.980e-50 Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1
Query: 1 EELHALAEELQRVKRDRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQV 306
EELHALAEELQRVKR R G+E EVS++ WGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQ+
Sbjct: 4450 EELHALAEELQRVKRHRDGEEGGEVSQKLWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQI 4551
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: A0A836CJU6_9STRA (Midasin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU6_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.360e-32 Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 1
Query: 52 GGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
GG S + +W RLR++T SQRLCEQLRLVL P VATKL+GDYR+GKRINMRRVI YIASGFR+DKIWLRRTKPAKR YQV V
Sbjct: 13 GGALSAGEAHRRWARLRALTAPASQRLCEQLRLVLAPQVATKLRGDYRAGKRINMRRVIGYIASGFRRDKIWLRRTKPAKRAYQVLV 99
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: UPI0009E58E41 (midasin-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E58E41) HSP 1 Score: 119 bits (299), Expect = 8.420e-31 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 46 DRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
DRG + + V++E W + +T +LSQ LCEQLRLVLEP +ATKL+GDYRSGKR+NMR+VI YIAS FRKDKIWLRRTKP+KR YQ+ +
Sbjct: 149 DRGTADEQRVAQEAWRKYELLTSSLSQELCEQLRLVLEPSLATKLKGDYRSGKRLNMRKVISYIASQFRKDKIWLRRTKPSKRQYQIML 237
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: A0A2R5GN05_9STRA (Midasin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GN05_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.920e-30 Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 58 QESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQV 306
+E E RE+WGRL T SQRLCEQLRL+LEP +A+KL+GDYR+GKRINMRRVIPYIAS FRKDKIWLRRTKP+KR+YQV
Sbjct: 5409 EELSEADRERWGRLAGDTNESSQRLCEQLRLLLEPTLASKLRGDYRTGKRINMRRVIPYIASQFRKDKIWLRRTKPSKREYQV 5491
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: A0A0S7J352_9TELE (MDN1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7J352_9TELE) HSP 1 Score: 113 bits (282), Expect = 2.050e-30 Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 1
Query: 88 WGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
W + +++T ALSQ+LCEQLRL+LEP A KL+GDYR+GKR+NMR+VIPYIAS FRKDKIWLRRTKP+KR+YQ+ +
Sbjct: 29 WLQYQALTSALSQQLCEQLRLILEPTQAAKLRGDYRTGKRLNMRKVIPYIASQFRKDKIWLRRTKPSKREYQICL 103
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: R7T6A3_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T6A3_CAPTE) HSP 1 Score: 112 bits (279), Expect = 4.380e-30 Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 82 EQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
E W + ++T +LSQ LCEQLRLVLEP A+K++GDYR+GKR+NMR+VIPYIAS FRKDKIWLRRT+P+KR+YQV V
Sbjct: 7 EAWQQYEALTASLSQDLCEQLRLVLEPTQASKMRGDYRTGKRLNMRKVIPYIASQFRKDKIWLRRTQPSKREYQVMV 83
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: UPI00077A9358 (midasin-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9358) HSP 1 Score: 122 bits (305), Expect = 4.820e-30 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 46 DRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
DRG E ++V++E W + +T LSQ LCEQLRLVLEP +A+KL+GDYRSGKR+NMR+VIPYIAS FRKDKIWLRRTKP+KR YQ+ +
Sbjct: 2418 DRGTIEEQQVAQEAWRKYEFLTAGLSQELCEQLRLVLEPALASKLKGDYRSGKRLNMRKVIPYIASQFRKDKIWLRRTKPSKRQYQIML 2506
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: UPI001CF1AE70 (midasin-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1AE70) HSP 1 Score: 122 bits (305), Expect = 4.860e-30 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 46 DRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
DRG E ++V++E W + +T LSQ LCEQLRLVLEP +A+KL+GDYRSGKR+NMR+VIPYIAS FRKDKIWLRRTKP+KR YQ+ +
Sbjct: 3654 DRGTIEEQQVAQEAWRKYEFLTAGLSQELCEQLRLVLEPALASKLKGDYRSGKRLNMRKVIPYIASQFRKDKIWLRRTKPSKRQYQIML 3742
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Match: UPI001CF59FC0 (midasin-like n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF59FC0) HSP 1 Score: 122 bits (305), Expect = 4.870e-30 Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 46 DRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLVLEPMVATKLQGDYRSGKRINMRRVIPYIASGFRKDKIWLRRTKPAKRDYQVSV 312
DRG E ++V++E W + +T LSQ LCEQLRLVLEP +A+KL+GDYRSGKR+NMR+VIPYIAS FRKDKIWLRRTKP+KR YQ+ +
Sbjct: 5207 DRGTIEEQQVAQEAWRKYEFLTAGLSQELCEQLRLVLEPALASKLKGDYRSGKRLNMRKVIPYIASQFRKDKIWLRRTKPSKRQYQIML 5295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13542.2812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13542.2812.1 >prot_Ecto-sp13_S_contig13542.2812.1 ID=prot_Ecto-sp13_S_contig13542.2812.1|Name=mRNA_Ecto-sp13_S_contig13542.2812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp EELHALAEELQRVKRDRGGQESREVSREQWGRLRSVTGALSQRLCEQLRLback to top mRNA from alignment at Ecto-sp13_S_contig13542:4324..4635- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13542.2812.1 ID=mRNA_Ecto-sp13_S_contig13542.2812.1|Name=mRNA_Ecto-sp13_S_contig13542.2812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13542:4324..4635- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13542:4324..4635- >mRNA_Ecto-sp13_S_contig13542.2812.1 ID=mRNA_Ecto-sp13_S_contig13542.2812.1|Name=mRNA_Ecto-sp13_S_contig13542.2812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=312bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13542:4324..4635- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |