prot_Ecto-sp13_S_contig13539.2808.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13539.2808.1
Unique Nameprot_Ecto-sp13_S_contig13539.2808.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length683
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13539.2808.1 vs. uniprot
Match: D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 1.910e-124
Identity = 383/560 (68.39%), Postives = 390/560 (69.64%), Query Frame = 0 
Query:   95 IKGSSTSSAPGSPDSLAAAAXXXXXXXXXXXXXXXXXXXXXXXVKDLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCAENVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSPAATPLPIGTAAXSAAXXXXXXXXXXXXXXXXXXXAAQLRPTSSSSVERERSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVAKGSGGHSMIGGGIRGGGVKGTAKEYFSNAAAAAAA---EGEEAVTVEPERGQKGAAAKQEASVAVEAEMRAVAGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGKKARRAAAADSKTPRDRRQHSWSGQSFSDYGXXXXXXXXXXXXXXXX--PRXXXXXXXXXXXXXXXXXXXXXX-PLYSTAVALAGTXXXXXXXXXXXXXXXSKGKWESVGRQRRSDGSGGDDAGIRDDGPQAQGVGGQGGAASAFVMDFIRGAGIHRLDPRRI 648
            +KG+S  SAPGSPDSLAAAA   XXXXXXXXXXXXXXXXXXXXVKDLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCA++VCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSP                      XXXXXXXXXXXX                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              XXXXXXXX            TVAKGSGGHSM GGGIR                        EGEEAVT E ERG KGAA KQEASV VEAEMRA AGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGK         SKTP+DRRQHSWS QSFSD  XXXXXXXX          PR          XXXXXXXXXX   P  STAVALAGT   XXXXXXXXXXXXSKGKWESVG QRRS GSG  +AG  DDGPQAQG     G ASAFVMDF+RGAGIHRLDPRRI
Sbjct:    1 MKGNSNGSAPGSPDSLAAAADARXXXXXXXXXXXXXXXXXXXXVKDLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCADSVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSP----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSRVKPRKSPATATVKAAADAAKLRPKSQAXXXXXXXXTFKPPRSPVTVTTVAKGSGGHSMSGGGIRXXXXXXXXXXXXXXXXXXXXXXXXEGEEAVTSESERGHKGAAGKQEASVTVEAEMRAAAGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGKXXXXXXXXXSKTPQDRRQHSWSSQSFSDXXXXXXXXXXTPGTRSSRSTPRSNGGNDFSHAXXXXXXXXXXNTAPFCSTAVALAGTASKXXXXXXXXXXXXSKGKWESVGGQRRSAGSGVGEAGTSDDGPQAQG-----GVASAFVMDFVRGAGIHRLDPRRI 533
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13539.2808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7C4_ECTSI1.910e-12468.39FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 170..234
e-value: 0.0011
score: 19.5
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 177..229
e-value: 1.9E-7
score: 31.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 172..234
e-value: 6.8E-9
score: 37.4
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 181..233
score: 9.349
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 177..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13539contigEcto-sp13_S_contig13539:69..4563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13539.2808.1mRNA_Ecto-sp13_S_contig13539.2808.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13539 69..4563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13539.2808.1 ID=prot_Ecto-sp13_S_contig13539.2808.1|Name=mRNA_Ecto-sp13_S_contig13539.2808.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=683bp
MTPPPRKKKQVQDSLSKTKQDPSSSASGGGKDKDGNAPMSGSSSTHSSVE
KPPDKPSSSRIASILSGSSNHGGSSNTTTTNNNKASSLFGPLLDIKGSST
SSAPGSPDSLAAAADARAVAVAVDGGGGGGVASSKKKVKDLKLRPSGTSR
TLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVC
AENVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSPAA
TPLPIGTAAPSAAAPAAPVPAAAAAPIPSVAAAAQLRPTSSSSVERERSS
PAPTAAAAAAPAAGASDRSSTAAAAVRRPTAAVKPRKSPATATVKAAADA
AKLRPKSQAGAAAAAAAAAAAVTFKPPRSPVTVTTVAKGSGGHSMIGGGI
RGGGVKGTAKEYFSNAAAAAAAEGEEAVTVEPERGQKGAAAKQEASVAVE
AEMRAVAGAEALGDEEDGEAEGGPPSSVSNTSKGRKRGKKARRAAAADSK
TPRDRRQHSWSGQSFSDYGGGGGGNTPGTKSSRSTPRSNGGNDFSHAGGG
GGGGAGNTAPLYSTAVALAGTASKAAATTASGGGGGSKGKWESVGRQRRS
DGSGGDDAGIRDDGPQAQGVGGQGGAASAFVMDFIRGAGIHRLDPRRIGG
EGGAVSAFVKDFVRGAGIHRLDPRRLSGESRFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD