prot_Ecto-sp13_S_contig1352.2801.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1352.2801.1
Unique Nameprot_Ecto-sp13_S_contig1352.2801.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: D7G6X6_ECTSI (RL10P_insert domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X6_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 2.070e-153
Identity = 224/228 (98.25%), Postives = 226/228 (99.12%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVTE 228
            MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDF EDSRFFMGKNKVMILALGKSEQDEY+DNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEG FEALAEGT+DAMVTE
Sbjct:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFREDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGEFEALAEGTDDAMVTE 228          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A835Z2W2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W2_9STRA)

HSP 1 Score: 225 bits (573), Expect = 9.810e-71
Identity = 118/218 (54.13%), Postives = 154/218 (70.64%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALA 218
            MP+S+RN+ VSLT T+KKGR LKQ ++ ++R  +D +  ++VF + N+RS+L+K+VRLDF  DSRFFMGKN +M  ALG S +DEY DNLRQVS+ ++GQ GLL T R  E V +YF  LAV + A  GF   ETI LP G    WPV MM+Q RKLG+ VEV++  L  RK  +MC  G+ ++PE AKLL L+D+KI+ F + L CRWSEG FE  A
Sbjct:    1 MPKSKRNKTVSLTSTAKKGRTLKQAVIKDIRDHIDSHQRLFVFRYDNMRSRLMKDVRLDFRGDSRFFMGKNTIMQRALGTSVEDEYSDNLRQVSRHIRGQCGLLVTNRSQEAVLSYFADLAVPEFANAGFFAQETITLPVGPT-QWPVGMMDQLRKLGLQVEVQDSQLWLRKECDMCKKGQALTPEQAKLLTLHDRKISVFKIKLTCRWSEGDFEEYA 217          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A3M6VK82_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK82_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.110e-60
Identity = 107/227 (47.14%), Postives = 152/227 (66.96%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVT 227
            MP+S+R +   LT+ +KKGRELK+ +V  +R  VD Y S Y FS+ N+R+   K VR+DF +DSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT +P EEV  YF  L+V+DH   GFV  ET+ +P G L  +  SMME  R LG+ V+++ G +V  +   +C  G+ ++PE AKLL  +D K+A F + +L  WS+  +E LA  T DA+ T
Sbjct:    1 MPKSKRQRTKPLTQANKKGRELKKNVVDSIRNAVDTYESAYAFSYQNMRTNHFKNVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLYRLSKDVSGNTGLLFTNKPHEEVMDYFVKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMMESLRGLGLPVDLKNGAIVLSRNYTICKPGQTLTPEQAKLLVHFDHKMAEFKLVMLSVWSKDKYERLA--TEDAVTT 224          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: H3GA64_PHYRM (Ribosome assembly factor mrt4 n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA64_PHYRM)

HSP 1 Score: 196 bits (498), Expect = 1.650e-59
Identity = 106/227 (46.70%), Postives = 152/227 (66.96%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVT 227
            MP+S+R +   LT+ +KKG ELKQ +V  +R  VD Y S YVFSF N+R+   K+VR+DF +DSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT +P EEV  YF  L+V+DH   GFV  ET+ +P G L  +  SM+E  R LG+ V+++ GV+V  +   +C  G+ ++PE AKLL  +D K+A F + +L  WS+  ++ +A    DA  T
Sbjct:    1 MPKSKRQRTKPLTQANKKGNELKQNVVEAIRNAVDTYASAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGSTGLLFTNKPHEEVVAYFAKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKNGVIVLSRNYTICKPGQTLTPEQAKLLVHFDHKMAEFKLVMLSLWSKDKYQRIA--AEDANAT 224          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A6V1SP53_HETAK (Ribosome assembly factor mrt4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SP53_HETAK)

HSP 1 Score: 195 bits (496), Expect = 1.890e-59
Identity = 109/216 (50.46%), Postives = 148/216 (68.52%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEG-GFE 215
            MP+S+R++KVSLTKT  KGR+ KQ +V +VR+ +DE+ ++Y F F N+RS   KE R D+  DSRFF+GKNK+M +ALG++ +DEY+D LR +SK L G VGLL T RP +EV++YF   +  D A  G +  ET+ L  GSL ++P  MM + RKLG+ VEV + VL   +   +C AGEPI  E AKLL     K+ATF +SL+ RWSE  G+E
Sbjct:    1 MPKSKRDKKVSLTKTDSKGRQQKQKMVQKVREAIDEFDALYTFRFDNMRSNNFKECRADW-RDSRFFLGKNKLMQIALGRTPEDEYQDGLRSISKELVGNVGLLMTSRPRDEVESYFSNFSKKDFAKAGAIAPETVTLERGSL-NFPAYMMSEIRKLGLTVEVRDAVLELMEDATICVAGEPIGVEAAKLLEHMQLKLATFQISLVSRWSEADGYE 214          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A485KK68_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK68_9STRA)

HSP 1 Score: 195 bits (495), Expect = 5.820e-59
Identity = 106/219 (48.40%), Postives = 151/219 (68.95%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWS-EGGFEALA 218
            MP+S+R +   LT+T  KG +LK+G+V  +R  +DEY +VYVFSF N+R+   K VR DF  DSRFF+GKNKVM +ALG++ ++EY +N+ +++  + G VGLL T +P EEV+ YFK LAV D A  GFV  ET+ +P G L  +  SM+E  R+LG+ V+++ G +V      +C AG+ ++PE AKLL  +DKK+ATF + LL RWS +G +E LA
Sbjct:    1 MPKSKRVRTKPLTQTKSKGADLKKGVVETIRNAIDEYQTVYVFSFENMRTNHFKVVRADF-SDSRFFLGKNKVMKVALGRTPEEEYAENIFKLATDISGSVGLLMTNKPNEEVQQYFKDLAVEDFAKSGFVATETVTIPAGPLPQFIGSMVESLRQLGLPVDLKRGAIVLINDHTICKAGQTLTPEQAKLLVHFDKKMATFNVQLLSRWSTDGKYERLA 218          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A8K1CRH8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRH8_PYTOL)

HSP 1 Score: 194 bits (493), Expect = 8.850e-59
Identity = 106/228 (46.49%), Postives = 150/228 (65.79%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVTE 228
            MPRS+R +   LTK+ KKG ELKQ +V  +R+ VD Y S Y FSF N+R+   KEVRLDF  DSRFF+GKNKVM LALG+++++EY D+L +++  + G VGL FT R  +EV  YF  L+  D A  GFV  E + +P G L  +  S +E  R LG+ V++++GV+V R+   +C  G+ ++PE A+LL  +D+K+ATF ++ L  WS+G FE LAE     M  +
Sbjct:    1 MPRSRRQRVKPLTKSEKKGSELKQRVVDSIREAVDTYESAYAFSFQNMRTNHFKEVRLDF-RDSRFFLGKNKVMKLALGRTKEEEYADDLFKLAADVNGSVGLFFTNRDRQEVIDYFNKLSFTDFARSGFVATEAVSVPEGPLPQFIGSQLESLRTLGLPVDLKKGVVVLRQDYTICKEGQTLTPEQARLLQHFDRKMATFKLTPLSVWSKGSFERLAENPEAGMEVD 227          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: A0A3F2RLT2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLT2_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.130e-58
Identity = 106/227 (46.70%), Postives = 154/227 (67.84%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVT 227
            MP+S+R +  +LT+  KKG  LKQ +V  VR  VD Y S YVFSF N+R+   K+VR+DF +DSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT +P EEV  YF  L+V+D+   GFV  ET+ +P G L  +  SM+E  R LG+ V++++GV+V  +   +C  G+ ++PE AKLL  +D+K+A F + +L  WS+  ++ LA  + DA  T
Sbjct:    1 MPKSKRQRTKALTQADKKGNALKQNVVDAVRNAVDTYTSAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTNKPHEEVLDYFSKLSVSDYPRSGFVVTETVTVPEGPLPQFIGSMIESLRGLGLPVDLKKGVVVLSQNYTICKTGQAVTPEQAKLLVHFDRKMAEFKLVVLSVWSKDKYQRLA--SEDATTT 224          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: I2CRG5_NANGC (Ribosome assembly factor mrt4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRG5_NANGC)

HSP 1 Score: 193 bits (491), Expect = 2.270e-58
Identity = 110/219 (50.23%), Postives = 147/219 (67.12%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGS--LGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEAL 217
            MPRS+R+QKVSLTKT+ KG+E K G +++VR+ +D + S+YVFSF ++RS   K+VR+D+  DSRFFMGKNKVM  ALG   +DE++DNLR +SKRL GQVGLL T R  EEV TYF+   V D A PG + D  + L      L  +P SM + FRKLG+ +E + G LV  +A  +C  G+ I+PE AKL+   D  +  F + L+C W +G FE L
Sbjct:   22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDW-RDSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQVGLLATNRSREEVLTYFENFKVQDFAKPGVIADADVTLEPSKDPLHFFPTSMFQLFRKLGLNLETKNGKLVLLEAFPVCRKGKAITPEQAKLMTHLDLPLVDFRIRLVCCWRDGEFEEL 239          
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Match: M4C3P0_HYAAE (Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3P0_HYAAE)

HSP 1 Score: 192 bits (489), Expect = 3.790e-58
Identity = 103/227 (45.37%), Postives = 156/227 (68.72%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGGFEALAEGTNDAMVT 227
            MP+S+R +  +LT+ +KKG ELK+ +V  +R  VD Y S YVFSF N+R+   K+VR+DF +DSRFF+GKNKVM LALG+S++DEY +NL ++SK + G  GLLFT +P +EV  YF  L+V+D+   GFV  +TI +P G L  +  SM+E  R LG+ V+++ GV++  +   +C +G+ ++PE AKLL  +D K+A F + +L  WS+  +E L+   +DA+ +
Sbjct:    1 MPKSKRQRTKTLTQANKKGNELKKNVVEAIRNAVDTYESAYVFSFQNMRTSHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEDEYAENLFRLSKDVSGNTGLLFTNKPRDEVVDYFAKLSVSDYPRAGFVATDTITIPEGPLPQFIGSMLESLRGLGLPVDLKNGVVMLSRNYTICKSGQTLTPEQAKLLVHFDHKLAEFKLVMLSVWSKDTYERLS--ADDAVTS 224          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1352.2801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X6_ECTSI2.070e-15398.25RL10P_insert domain-containing protein n=2 Tax=Ect... [more]
A0A835Z2W2_9STRA9.810e-7154.13Ribosome assembly factor mrt4 n=1 Tax=Tribonema mi... [more]
A0A3M6VK82_9STRA4.110e-6047.14Ribosome assembly factor mrt4 n=1 Tax=Peronospora ... [more]
H3GA64_PHYRM1.650e-5946.70Ribosome assembly factor mrt4 n=24 Tax=Phytophthor... [more]
A0A6V1SP53_HETAK1.890e-5950.46Ribosome assembly factor mrt4 n=1 Tax=Heterosigma ... [more]
A0A485KK68_9STRA5.820e-5948.40Ribosome assembly factor mrt4 n=1 Tax=Aphanomyces ... [more]
A0A8K1CRH8_PYTOL8.850e-5946.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RLT2_9STRA2.130e-5846.70Ribosome assembly factor mrt4 n=1 Tax=Phytophthora... [more]
I2CRG5_NANGC2.270e-5850.23Ribosome assembly factor mrt4 (Fragment) n=1 Tax=N... [more]
M4C3P0_HYAAE3.790e-5845.37Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.1730coord: 29..211
e-value: 4.8E-57
score: 194.5
NoneNo IPR availableGENE3D3.90.105.20coord: 125..203
e-value: 4.8E-57
score: 194.5
NoneNo IPR availablePANTHERPTHR45841FAMILY NOT NAMEDcoord: 1..223
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 20..154
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 128..193
e-value: 4.2E-11
score: 42.7
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 19..120
e-value: 2.8E-20
score: 72.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1352contigEcto-sp13_S_contig1352:10962..13218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1352.2801.1mRNA_Ecto-sp13_S_contig1352.2801.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1352 10521..13406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1352.2801.1 ID=prot_Ecto-sp13_S_contig1352.2801.1|Name=mRNA_Ecto-sp13_S_contig1352.2801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRS
KLLKEVRLDFMEDSRFFMGKNKVMILALGKSEQDEYKDNLRQVSKRLKGQ
VGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSM
MEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAT
FTMSLLCRWSEGGFEALAEGTNDAMVTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040637RL10P_insert
IPR001790Ribosomal_L10P