prot_Ecto-sp13_S_contig1350.2788.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1350.2788.1
Unique Nameprot_Ecto-sp13_S_contig1350.2788.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1350.2788.1 vs. uniprot
Match: D8LHS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS0_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 2.080e-30
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 0 
Query:    1 MAIVALGGDLGILSSRAGEFGESNLFPDNSVAKTSELAEILKGEHAKFQANVYDFLDYAAAAEKGTNLHRGESQSR 76
            MA++AL GDLG   SRAGEFG+SNLFP++S AKT ELA++L GEHAKFQ NVY+FLDYAAAAEKGTNLH+GESQSR
Sbjct:  162 MAVIALAGDLGCPLSRAGEFGQSNLFPEDSAAKTLELAKVLTGEHAKFQVNVYNFLDYAAAAEKGTNLHKGESQSR 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1350.2788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHS0_ECTSI2.080e-3077.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1350contigEcto-sp13_S_contig1350:2452..3343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1350.2788.1mRNA_Ecto-sp13_S_contig1350.2788.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1350 1877..3606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1350.2788.1 ID=prot_Ecto-sp13_S_contig1350.2788.1|Name=mRNA_Ecto-sp13_S_contig1350.2788.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MAIVALGGDLGILSSRAGEFGESNLFPDNSVAKTSELAEILKGEHAKFQA
NVYDFLDYAAAAEKGTNLHRGESQSRARMLIFICIRPTNTYMKGLILFSC
ETLIAC*
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