prot_Ecto-sp13_S_contig13499.2782.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13499.2782.1
Unique Nameprot_Ecto-sp13_S_contig13499.2782.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: A0A6H5KBL4_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.150e-46
Identity = 85/93 (91.40%), Postives = 88/93 (94.62%), Query Frame = 0
Query:    1 MHELRNFEAVEGGATTPTRRVAQVKSSSGGWQGKRGDGGGRTGSGGTNTFRSASPGRSDGGYGGRVMTVEDMYYEDECAEFKRVYDIHAAPRT 93
            MHELRNFEAV+GGATTPTR +AQVKSSSG  QG+RG GGGRTGSGGTNTFRSASPGRSDGGYGGRVMTVEDM YEDECAEFKRVYDIHAAPRT
Sbjct:  367 MHELRNFEAVKGGATTPTRMMAQVKSSSGWRQGQRGCGGGRTGSGGTNTFRSASPGRSDGGYGGRVMTVEDMDYEDECAEFKRVYDIHAAPRT 459          
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: A0A6H5KRF6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF6_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 3.410e-45
Identity = 84/98 (85.71%), Postives = 88/98 (89.80%), Query Frame = 0
Query:    1 MHELRNFEAVEGGATTPTRRVAQVKSSSGGWQGKRGDGGGRTGSGGTNT-----FRSASPGRSDGGYGGRVMTVEDMYYEDECAEFKRVYDIHAAPRT 93
            MHELRNFEAV+GGATTPTRR+AQVKSSSG  QG+RG GGGRTGSGGTNT      RSASPGRSDGGYGGRVMTVEDM YEDECAEF+RVYDIHAAPRT
Sbjct:  163 MHELRNFEAVKGGATTPTRRMAQVKSSSGWRQGQRGGGGGRTGSGGTNTRVMTGXRSASPGRSDGGYGGRVMTVEDMDYEDECAEFQRVYDIHAAPRT 260          
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: D7G674_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G674_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.640e-40
Identity = 75/94 (79.79%), Postives = 83/94 (88.30%), Query Frame = 0
Query:    1 MHELRNFEAVEGGATTPTRRVAQVKSSSGGWQGKRGDGGGRTGSGGTNTFRSASPGRSDGGYGGR-VMTVEDMYYEDECAEFKRVYDIHAAPRT 93
            M ELRNFEAV+GGATTPTRR AQVK SSGG QG++ DGGG TGSGGTNTFRSASPGR DGGYGGR VMTV+++  EDECAEF+RVYDIH +PRT
Sbjct:  109 MQELRNFEAVKGGATTPTRRSAQVKGSSGGRQGQKRDGGGGTGSGGTNTFRSASPGRLDGGYGGRRVMTVDEVDCEDECAEFQRVYDIHVSPRT 202          
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.820e-32
Identity = 65/78 (83.33%), Postives = 70/78 (89.74%), Query Frame = 0
Query:   17 PTRRVAQVKSSSGGWQGKRGDGGGRTGSGGTNTFRSASPGRSDGGYGGR-VMTVEDMYYEDECAEFKRVYDIHAAPRT 93
            PTRR+AQVK SSGG QG+R DGGGRTGSGG NTFRSASPGRSDGGYGGR VMTVEDM YED+C EFKRVY IH++PRT
Sbjct:  129 PTRRMAQVKGSSGGRQGQRCDGGGRTGSGGGNTFRSASPGRSDGGYGGRRVMTVEDMDYEDKCEEFKRVYGIHSSPRT 206          
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.830e-20
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
Query:   50 FRSASPGRSDGGYGGRVMTVEDMYYEDECAEFKRVYDIHAAPRT 93
            FRSASPGRSDGGYGGRVMTVEDM YEDECAEFKRVYDIHAAPRT
Sbjct:  596 FRSASPGRSDGGYGGRVMTVEDMDYEDECAEFKRVYDIHAAPRT 639          
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Match: A0A6H5K8R6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R6_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.680e-12
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 MHELRNFEAVEGGATTPTRRVAQVKSSSGGWQGKRGDGGGRTGS 44
            MHE+R+FEAVEGGATTPTRR+AQVK SSGG QG+R DGGGRTGS
Sbjct:  278 MHEVRSFEAVEGGATTPTRRMAQVKGSSGGRQGQRRDGGGRTGS 321          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13499.2782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KBL4_9PHAE2.150e-4691.40CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KRF6_9PHAE3.410e-4585.71CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G674_ECTSI2.640e-4079.79CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0Q4_9PHAE2.820e-3283.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K255_9PHAE4.830e-2097.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8R6_9PHAE1.680e-1284.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13499contigEcto-sp13_S_contig13499:849..1142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13499.2782.1mRNA_Ecto-sp13_S_contig13499.2782.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13499 722..1466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13499.2782.1 ID=prot_Ecto-sp13_S_contig13499.2782.1|Name=mRNA_Ecto-sp13_S_contig13499.2782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MHELRNFEAVEGGATTPTRRVAQVKSSSGGWQGKRGDGGGRTGSGGTNTF
RSASPGRSDGGYGGRVMTVEDMYYEDECAEFKRVYDIHAAPRTKLSE*
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