prot_Ecto-sp13_S_contig1346.2757.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1346.2757.1
Unique Nameprot_Ecto-sp13_S_contig1346.2757.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1346.2757.1 vs. uniprot
Match: A0A6H5KX67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX67_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 1.160e-103
Identity = 183/229 (79.91%), Postives = 191/229 (83.41%), Query Frame = 0 
Query:    1 PWEGNAGRGQPRGRHGNQNGNCRWTAPSSAPSSPHGSSCRTGGRAPPRKDGRVYLRRSDRSRSPPDISSPSWPSPRERVSRETVDGGSICPVLPGRGGEDGRTATMVVAAQRATNEGNNTDAGLVARRFSSGGVGGSGVGXXXXXXXXXXXXDNGWPPDSSATAGHQEMARSREQSSRPRQQLRRFSTGCAPFRLKSATLPPHFGMEDHEQQMFLPLRAAHNQAVEFMT 229
            PWEGNAGR QP GRHGN+N  CRWTAPSSAPSS  GS CRTGGRAPP K   VYLR S+R RSPPDISSPSWPSP E+VSRET DGG +C +LPGRGGED RTA MVVAAQRATNEGNNT A  VARRFSSGGV G       XXXXXXXXXDNGWPPD SATA H+EMARSREQ+SRPRQQLRRFS GC PFRLK A LPPHFGMEDHEQQM LPLRAA NQA+EFMT
Sbjct:  245 PWEGNAGREQPVGRHGNENDRCRWTAPSSAPSSLRGSCCRTGGRAPPPKREGVYLRWSERCRSPPDISSPSWPSPGEKVSRETDDGGGMCTMLPGRGGEDRRTANMVVAAQRATNEGNNTAASPVARRFSSGGVSGX------XXXXXXXXXDNGWPPDPSATADHEEMARSREQASRPRQQLRRFSNGCVPFRLKPAILPPHFGMEDHEQQMSLPLRAARNQAMEFMT 467
[Close]
BLAST of mRNA_Ecto-sp13_S_contig1346.2757.1 vs. uniprot
Match: D8LM17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM17_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 3.950e-89
Identity = 168/229 (73.36%), Postives = 175/229 (76.42%), Query Frame = 0 
Query:    1 PWEGNAGRGQPRGRHGNQNGNCRWTAPSSAPSSPHGSSCRTGGRAPPRKDGRVYLRRSDRSRSPPDISSPSWPSPRERVSRETVDGGSICPVLPGRGGEDGRTATMVVAAQRATNEGNNTDAGLVARRFSSGGVGGSGVGXXXXXXXXXXXXDNGWPPDSSATAGHQEMARSREQSSRPRQQLRRFSTGCAPFRLKSATLPPHFGMEDHEQQMFLPLRAAHNQAVEFMT 229
            PWEGNAGRGQP GRHGN+NG+CRWTAPSS PSSPH SSCRTGGRAPPRK   VYLRRS+RSRSPPDISSPSWPSPRERVSRET DGG +C V PGRGGED RTA                                    XXXXXXXXXXXXD+GWPPD SATAGH+EM RSREQ+SR RQQLRRFSTGCAPFRLK ATLPPHFGMEDHEQQMFLPL A  NQAVEFMT
Sbjct:  320 PWEGNAGRGQPVGRHGNENGHCRWTAPSSVPSSPHDSSCRTGGRAPPRKHEGVYLRRSERSRSPPDISSPSWPSPRERVSRETADGGDMCTVFPGRGGEDRRTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXDSGWPPDPSATAGHEEMDRSREQASRSRQQLRRFSTGCAPFRLKPATLPPHFGMEDHEQQMFLPLGATDNQAVEFMT 542
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1346.2757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX67_9PHAE1.160e-10379.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM17_ECTSI3.950e-8973.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1346contigEcto-sp13_S_contig1346:7636..8322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1346.2757.1mRNA_Ecto-sp13_S_contig1346.2757.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1346 7636..8322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1346.2757.1 ID=prot_Ecto-sp13_S_contig1346.2757.1|Name=mRNA_Ecto-sp13_S_contig1346.2757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
PWEGNAGRGQPRGRHGNQNGNCRWTAPSSAPSSPHGSSCRTGGRAPPRKD
GRVYLRRSDRSRSPPDISSPSWPSPRERVSRETVDGGSICPVLPGRGGED
GRTATMVVAAQRATNEGNNTDAGLVARRFSSGGVGGSGVGGGSGVGGGSG
GGDNGWPPDSSATAGHQEMARSREQSSRPRQQLRRFSTGCAPFRLKSATL
PPHFGMEDHEQQMFLPLRAAHNQAVEFMT
back to top