prot_Ecto-sp13_S_contig13458.2755.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13458.2755.1
Unique Nameprot_Ecto-sp13_S_contig13458.2755.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length195
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig13458.2755.1 vs. uniprot
Match: D7FSC3_ECTSI (Cellulose synthase (UDP-forming), family GT2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC3_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 2.470e-113
Identity = 191/195 (97.95%), Postives = 192/195 (98.46%), Query Frame = 0 
Query:    1 MDLKAADDPSLTEEGAWVPGSPLPAAPVQMIDVPQRAQTMLDDGMQVRSSAAPSENGGGAPASLAMFSTAGGISNVSVPRDGSVSGGDRGVRVAQEPDIYDVIEADNTAMERVTKSKARDIANSTPTHSSNHSIIGRGILKRGKSSRRPGSDSVRAGFSDVKSVSRFDPDEPPRSYLQSREESMLGEGSVAASPG 195
            M+LK ADDPSLTEEGAWVPGSPLPAAPVQMIDVPQRAQTMLDDGMQVRSSAAPSENGGGAPASLAMFSTAGGISNVSVPRDGSVSG DRGVR AQEPDIYDVIEADNTAMERVTKSKARDIANSTPTHSSNHSIIGRGILKRGKSSRRPGSDSVRAGFSDVKSVSRFDPDEPPRSYLQSREESMLGEGSVAASPG
Sbjct:    1 MNLKPADDPSLTEEGAWVPGSPLPAAPVQMIDVPQRAQTMLDDGMQVRSSAAPSENGGGAPASLAMFSTAGGISNVSVPRDGSVSG-DRGVRAAQEPDIYDVIEADNTAMERVTKSKARDIANSTPTHSSNHSIIGRGILKRGKSSRRPGSDSVRAGFSDVKSVSRFDPDEPPRSYLQSREESMLGEGSVAASPG 194
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13458.2755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSC3_ECTSI2.470e-11397.95Cellulose synthase (UDP-forming), family GT2 n=2 T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13458contigEcto-sp13_S_contig13458:1147..4523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13458.2755.1mRNA_Ecto-sp13_S_contig13458.2755.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13458 1147..4598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13458.2755.1 ID=prot_Ecto-sp13_S_contig13458.2755.1|Name=mRNA_Ecto-sp13_S_contig13458.2755.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=195bp
MDLKAADDPSLTEEGAWVPGSPLPAAPVQMIDVPQRAQTMLDDGMQVRSS
AAPSENGGGAPASLAMFSTAGGISNVSVPRDGSVSGGDRGVRVAQEPDIY
DVIEADNTAMERVTKSKARDIANSTPTHSSNHSIIGRGILKRGKSSRRPG
SDSVRAGFSDVKSVSRFDPDEPPRSYLQSREESMLGEGSVAASPG
back to top