prot_Ecto-sp13_S_contig13444.2746.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13444.2746.1
Unique Nameprot_Ecto-sp13_S_contig13444.2746.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length150
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13444.2746.1 vs. uniprot
Match: D7FJU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU0_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 1.320e-87
Identity = 129/145 (88.97%), Postives = 134/145 (92.41%), Query Frame = 0 
Query:    1 VDRLPLRPVFTTMNNQDRPPAIQELAIRQFLVHLVLRFCKAWFMARVRVGQNAAGSAHCLDAARAFLAFASFAFFVFVHAIYLGIYVLEYYGVIDREHCDNLLRRVEERWLVCNFFLSGPGPMWASWSRRVWAILLGETAESDDD 145
            +DRLPLRPV TTMNNQ+RPPAIQELAIRQF VHLVLRFCKAWFMARVR  Q A+ +AHCLDAARAFLAFASFAFFVFVHA+YLGIYVLEY GVIDREHCDNLLRRVEER LVCNFFLS  GPMWASWSRRVWAILLGET ESDDD
Sbjct:    1 MDRLPLRPVLTTMNNQERPPAIQELAIRQFAVHLVLRFCKAWFMARVRFDQKASENAHCLDAARAFLAFASFAFFVFVHAVYLGIYVLEYDGVIDREHCDNLLRRVEERCLVCNFFLSRQGPMWASWSRRVWAILLGETTESDDD 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13444.2746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJU0_ECTSI1.320e-8788.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..64
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13444contigEcto-sp13_S_contig13444:1140..1589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13444.2746.1mRNA_Ecto-sp13_S_contig13444.2746.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13444 1140..1589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13444.2746.1 ID=prot_Ecto-sp13_S_contig13444.2746.1|Name=mRNA_Ecto-sp13_S_contig13444.2746.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp
VDRLPLRPVFTTMNNQDRPPAIQELAIRQFLVHLVLRFCKAWFMARVRVG
QNAAGSAHCLDAARAFLAFASFAFFVFVHAIYLGIYVLEYYGVIDREHCD
NLLRRVEERWLVCNFFLSGPGPMWASWSRRVWAILLGETAESDDDDDQM*
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