prot_Ecto-sp13_S_contig13442.2745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13442.2745.1
Unique Nameprot_Ecto-sp13_S_contig13442.2745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length234
Homology
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: D7FMS9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS9_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 9.270e-149
Identity = 214/234 (91.45%), Postives = 217/234 (92.74%), Query Frame = 0
Query:    1 RRRPDLRQIGLQTAAAVVLQQDEVVDVAEVQPEAEGDTVGEASGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAGSGKADGEGXXXXXXXXXXXEGEVVAS 234
            RRRPDLRQIGLQTAAAVV+QQDEVVDVAE Q  AEGDT+GE SGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNL+RKGGSLKKTSMSEL WDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAG GKADGEG           EGEVVAS
Sbjct:  102 RRRPDLRQIGLQTAAAVVVQQDEVVDVAEEQAGAEGDTIGEESGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNLVRKGGSLKKTSMSELKWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAGPGKADGEGGGSEDADDGSSEGEVVAS 335          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A836CG96_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG96_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.310e-28
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 0
Query:  103 FIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKR-LEKMAANVAGSGKADGE 215
            F+ VQ F+   +RKG S+++    EL W+++VTE EH+ EL AY CE+CGYTLFPAR RH+ FF++V+D+ CPEC A +S F D +D  DP N  R  E++ A +A   KA+ E
Sbjct:   12 FVIVQFFI-TWVRKGFSIRRVMAPELKWEYLVTEKEHIKELHAYRCEQCGYTLFPARNRHKKFFEDVKDYTCPECGAAKSEFVDIHDLTDPRNIDRPREELEAALAAKIKAEAE 124          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S2D095_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D095_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 1.370e-15
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
Query:   91 KTYGFWTWQVFGFIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRL 199
            KT   WT  +F  + V+  VR  +   G+L+     E N+ +I        EL  +CCE CGYT+FPARGR   FF +   FKCP CD+P+ SFFD  D +DP   + L
Sbjct:  121 KTSFLWTGIIFTLLIVK-IVR--MAAAGNLRAAFFEEPNYKYIARSDAEEAELHEFCCETCGYTMFPARGREGKFFPDA--FKCPNCDSPKESFFDMTDLSDPRTIEAL 224          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7J7IMV8_9RHOD (Rubredoxin-like domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMV8_9RHOD)

HSP 1 Score: 77.4 bits (189), Expect = 2.550e-13
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   98 WQVFG-FIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEK 201
            W + G FI   + +R L+R+    KK     +  +    E +   EL  Y C +CGYTL+PARGR   FF +   FKCP+C AP+S F+D ND NDP NQ+  E+
Sbjct:  142 WFLMGIFIVFLNVLRRLVRR----KKAENVPIGSEKYRAESDE--ELHVYRCGQCGYTLYPARGRELKFFPKT--FKCPQCSAPKSEFWDLNDPNDPRNQETDEE 238          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A8J6CCP8_DIALT (Rubredoxin-like domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCP8_DIALT)

HSP 1 Score: 74.3 bits (181), Expect = 1.280e-12
Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0
Query:  142 ELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANV 206
            ELKA+ CE CGY L+PARGR   FF +   FKCP C +P+ SF+D ND NDP N +  ++  A+ 
Sbjct:  144 ELKAFKCENCGYELYPARGREGKFFPDT--FKCPMCKSPKESFYDMNDANDPRNWEEDDENGADA 206          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A0G4GWS9_VITBC (Rubredoxin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWS9_VITBC)

HSP 1 Score: 74.7 bits (182), Expect = 1.700e-12
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  110 VRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAA 204
            V NL+ + G+ K+T         I+   E   EL  + CE CGYT+FPARGR   FF +  DF+CP C A +  F+D ND +DPHN+   E  +A
Sbjct:  114 VLNLVTRSGA-KRTKA-------IIKTEEDAKELHRFTCENCGYTIFPARGREGKFFGD--DFECPVCGAKKEHFYDGNDPDDPHNKAPEEGESA 198          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S1U8S4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.740e-9
Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 0
Query:  127 ELNWDHIVTEPEHLLE--LKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAG 208
            E NWD    +    +E  L  + CE+CG+T++PARGR   FF +   F CP C A + SF+D ND  DP NQ+      A   G
Sbjct:  134 EPNWDAAELQATGEVEDVLHMFRCEDCGFTIYPARGREGKFFPKG--FTCPNCSASQESFYDLNDPTDPRNQEEXXXXDAGPPG 215          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: M1VCH9_CYAM1 (Rubredoxin-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VCH9_CYAM1)

HSP 1 Score: 64.3 bits (155), Expect = 1.300e-8
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0
Query:  142 ELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDAND 189
            EL  Y C +CGYTL+PARGR   FF     FKCP+C AP+S F+D ND
Sbjct:  182 ELHVYRCGKCGYTLYPARGRELKFFPRT--FKCPQCSAPKSEFWDLND 227          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S0E573_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E573_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 9.710e-8
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 0
Query:  138 EHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKM 202
            E   EL  + CE+CG+TLFPARGR   FF +   F+CP C+A +  FFD  D  D   ++ LE M
Sbjct:  148 EEEAELHEFVCEDCGFTLFPARGREGKFFSDS--FRCPTCNAAKEKFFDLTDVTD---ERSLEYM 207          
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7V5I7Z1_9BACT (Rubredoxin-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I7Z1_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 1.410e-5
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0
Query:  148 CEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDK 190
            C+ CGYTLFPA GR   F+ +  DFKCP+C AP+S F D +++
Sbjct:  539 CQRCGYTLFPAAGREWKFYGD--DFKCPQCGAPKSDFRDTSEQ 579          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FMS9_ECTSI9.270e-14991.45Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A836CG96_9STRA1.310e-2849.12Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S2D095_9EUKA1.370e-1541.28Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7J7IMV8_9RHOD2.550e-1341.90Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A8J6CCP8_DIALT1.280e-1250.77Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A0G4GWS9_VITBC1.700e-1242.11Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S1U8S4_9STRA1.740e-940.48Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
M1VCH9_CYAM11.300e-858.33Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S0E573_9EUKA9.710e-846.15Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7V5I7Z1_9BACT1.410e-553.49Rubredoxin-like domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.10coord: 143..187
e-value: 1.4E-5
score: 26.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..234
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 142..189
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 143..187
score: 9.176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13442contigEcto-sp13_S_contig13442:1..4720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13442.2745.1mRNA_Ecto-sp13_S_contig13442.2745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13442 1..4720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13442.2745.1 ID=prot_Ecto-sp13_S_contig13442.2745.1|Name=mRNA_Ecto-sp13_S_contig13442.2745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp
RRRPDLRQIGLQTAAAVVLQQDEVVDVAEVQPEAEGDTVGEASGEEFMNL
AESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQV
FGFIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEE
CGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLE
KMAANVAGSGKADGEGGGSEDADGGSSEGEVVAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024934Rubredoxin-like_dom