mRNA_Ecto-sp13_S_contig13442.2745.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: D7FMS9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS9_ECTSI) HSP 1 Score: 429 bits (1102), Expect = 9.270e-149 Identity = 214/234 (91.45%), Postives = 217/234 (92.74%), Query Frame = 1
Query: 1 RRRPDLRQIGLQTAAAVVLQQDEVVDVAEVQPEAEGDTVGEASGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAGSGKADGEGXXXXXXXXXXXEGEVVAS 702
RRRPDLRQIGLQTAAAVV+QQDEVVDVAE Q AEGDT+GE SGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNL+RKGGSLKKTSMSEL WDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAG GKADGEG EGEVVAS
Sbjct: 102 RRRPDLRQIGLQTAAAVVVQQDEVVDVAEEQAGAEGDTIGEESGEEFMNLAESFDASQRLVEESMMDPQTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNLVRKGGSLKKTSMSELKWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAGPGKADGEGGGSEDADDGSSEGEVVAS 335
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A836CG96_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG96_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.310e-28 Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 307 FIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKR-LEKMAANVAGSGKADGE 645
F+ VQ F+ +RKG S+++ EL W+++VTE EH+ EL AY CE+CGYTLFPAR RH+ FF++V+D+ CPEC A +S F D +D DP N R E++ A +A KA+ E
Sbjct: 12 FVIVQFFI-TWVRKGFSIRRVMAPELKWEYLVTEKEHIKELHAYRCEQCGYTLFPARNRHKKFFEDVKDYTCPECGAAKSEFVDIHDLTDPRNIDRPREELEAALAAKIKAEAE 124
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S2D095_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D095_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 1.370e-15 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 271 KTYGFWTWQVFGFIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRL 597
KT WT +F + V+ VR + G+L+ E N+ +I EL +CCE CGYT+FPARGR FF + FKCP CD+P+ SFFD D +DP + L
Sbjct: 121 KTSFLWTGIIFTLLIVK-IVR--MAAAGNLRAAFFEEPNYKYIARSDAEEAELHEFCCETCGYTMFPARGREGKFFPDA--FKCPNCDSPKESFFDMTDLSDPRTIEAL 224
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7J7IMV8_9RHOD (Rubredoxin-like domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMV8_9RHOD) HSP 1 Score: 77.4 bits (189), Expect = 2.550e-13 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 292 WQVFG-FIFVQHFVRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEK 603
W + G FI + +R L+R+ KK + + E + EL Y C +CGYTL+PARGR FF + FKCP+C AP+S F+D ND NDP NQ+ E+
Sbjct: 142 WFLMGIFIVFLNVLRRLVRR----KKAENVPIGSEKYRAESDE--ELHVYRCGQCGYTLYPARGRELKFFPKT--FKCPQCSAPKSEFWDLNDPNDPRNQETDEE 238
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A8J6CCP8_DIALT (Rubredoxin-like domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCP8_DIALT) HSP 1 Score: 74.3 bits (181), Expect = 1.280e-12 Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 424 ELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANV 618
ELKA+ CE CGY L+PARGR FF + FKCP C +P+ SF+D ND NDP N + ++ A+
Sbjct: 144 ELKAFKCENCGYELYPARGREGKFFPDT--FKCPMCKSPKESFYDMNDANDPRNWEEDDENGADA 206
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A0G4GWS9_VITBC (Rubredoxin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWS9_VITBC) HSP 1 Score: 74.7 bits (182), Expect = 1.700e-12 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 328 VRNLIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAA 612
V NL+ + G+ K+T I+ E EL + CE CGYT+FPARGR FF + DF+CP C A + F+D ND +DPHN+ E +A
Sbjct: 114 VLNLVTRSGA-KRTKA-------IIKTEEDAKELHRFTCENCGYTIFPARGREGKFFGD--DFECPVCGAKKEHFYDGNDPDDPHNKAPEEGESA 198
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S1U8S4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.740e-9 Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 379 ELNWDHIVTEPEHLLE--LKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAG 624
E NWD + +E L + CE+CG+T++PARGR FF + F CP C A + SF+D ND DP NQ+ A G
Sbjct: 134 EPNWDAAELQATGEVEDVLHMFRCEDCGFTIYPARGREGKFFPKG--FTCPNCSASQESFYDLNDPTDPRNQEEXXXXDAGPPG 215
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: M1VCH9_CYAM1 (Rubredoxin-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VCH9_CYAM1) HSP 1 Score: 64.3 bits (155), Expect = 1.300e-8 Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 1
Query: 424 ELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDAND 567
EL Y C +CGYTL+PARGR FF FKCP+C AP+S F+D ND
Sbjct: 182 ELHVYRCGKCGYTLYPARGRELKFFPRT--FKCPQCSAPKSEFWDLND 227
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7S0E573_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E573_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 9.710e-8 Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 412 EHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKM 606
E EL + CE+CG+TLFPARGR FF + F+CP C+A + FFD D D ++ LE M
Sbjct: 148 EEEAELHEFVCEDCGFTLFPARGREGKFFSDS--FRCPTCNAAKEKFFDLTDVTD---ERSLEYM 207
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Match: A0A7V5I7Z1_9BACT (Rubredoxin-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I7Z1_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 1.410e-5 Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 442 CEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDK 570
C+ CGYTLFPA GR F+ + DFKCP+C AP+S F D +++
Sbjct: 539 CQRCGYTLFPAAGREWKFYGD--DFKCPQCGAPKSDFRDTSEQ 579 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13442.2745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13442.2745.1 >prot_Ecto-sp13_S_contig13442.2745.1 ID=prot_Ecto-sp13_S_contig13442.2745.1|Name=mRNA_Ecto-sp13_S_contig13442.2745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=234bp RRRPDLRQIGLQTAAAVVLQQDEVVDVAEVQPEAEGDTVGEASGEEFMNLback to top mRNA from alignment at Ecto-sp13_S_contig13442:1..4720- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13442.2745.1 ID=mRNA_Ecto-sp13_S_contig13442.2745.1|Name=mRNA_Ecto-sp13_S_contig13442.2745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4720bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13442:1..4720- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13442:1..4720- >mRNA_Ecto-sp13_S_contig13442.2745.1 ID=mRNA_Ecto-sp13_S_contig13442.2745.1|Name=mRNA_Ecto-sp13_S_contig13442.2745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=702bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13442:1..4720- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |