prot_Ecto-sp13_S_contig13440.2744.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13440.2744.1
Unique Nameprot_Ecto-sp13_S_contig13440.2744.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: D8LUA3_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUA3_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.200e-97
Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYPAP 152
            MA+KL+ DGYQLVSGGTDNHLVLVDLKKS++IDGARVELMLE+VNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYPAP
Sbjct:  340 MAEKLIADGYQLVSGGTDNHLVLVDLKKSSNIDGARVELMLEVVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYPAP 491          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S2C4R3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4R3_9STRA)

HSP 1 Score: 201 bits (510), Expect = 5.110e-60
Identity = 99/150 (66.00%), Postives = 119/150 (79.33%), Query Frame = 0
Query:    2 AKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGK-IKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYP 150
            AK L   GY+LVSGGTDNHLVLVDLKKS  IDGARVE +LE VNMATNKNTVPGD SA+TP GIRMG PALT+RGFTE DF++VA FF RGVT+++ +   TGK +K ++ ALA G +  PEI+ LR D+  FARTFP IGFD+ +M++P
Sbjct:  295 AKSLQAKGYELVSGGTDNHLVLVDLKKSRGIDGARVERVLECVNMATNKNTVPGDVSAMTPSGIRMGTPALTTRGFTEADFDKVAEFFDRGVTISQMLKESTGKKLKDFKAALAPGAAPVPEIEALRADVAAFARTFPTIGFDESSMKFP 444          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A835YWD3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD3_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.860e-60
Identity = 97/150 (64.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYP 150
            +A  L+  GYQLVSGGTDNHL+LVDLKKS ++DGARVE +LE+ NMATNKNTVPGD SAL PGGIRMGAPALT+RGFTEEDF +VA FF RGV ++  +   TGK+K Y+  LA G   +PE+ +L+ D+  F+R FP IGFD+ TMRYP
Sbjct:  349 LADALMGMGYQLVSGGTDNHLLLVDLKKSKNMDGARVERVLELANMATNKNTVPGDTSALMPGGIRMGAPALTTRGFTEEDFVKVAEFFDRGVKISMDIKEKTGKLKDYKAFLASGADAHPELAKLKADVVAFSRGFPAIGFDETTMRYP 498          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S2WJP7_9STRA (Serine hydroxymethyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJP7_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.020e-56
Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGK-IKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYP 150
            +A  L   GY LVSGGTDNHLVLVDLK S  IDGARVE +LE+ N+ATNKNTVPGD SA+TPGGIRMGAPALTSRG  E DFE+VA FF RGV++A +V   TGK +K +R AL  G S  PE++ LR D+ +F++ FP +GFD+ +MR+P
Sbjct:  341 LASALTKRGYSLVSGGTDNHLVLVDLKASRGIDGARVERVLELANIATNKNTVPGDVSAMTPGGIRMGAPALTSRGLGEADFERVAEFFDRGVSIALQVKESTGKKLKDFRAALQPGASAVPELEALRQDVIDFSQQFPTVGFDESSMRFP 491          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S0ANW0_9STRA (Glycine hydroxymethyltransferase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ANW0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.360e-56
Identity = 92/151 (60.93%), Postives = 118/151 (78.15%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKV-AADTGK-IKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRY 149
            ++K+L + GY LVSGGTDNHLVLVDLK S  IDGARVE +LE+  +A+NKNT+PGDKSALTPGGIRMGAPALTSRGF E+DF QVA FF R V +A ++ + D GK +K +RE  + G S  PE++QLR D++ FA +FP +GFD++ M +
Sbjct:   53 LSKRLNELGYTLVSGGTDNHLVLVDLKTSRGIDGARVERVLELACIASNKNTIPGDKSALTPGGIRMGAPALTSRGFVEDDFVQVANFFDRAVEIAVRLKSTDQGKKLKGFRELCSVGPSVDPELEQLRHDVSTFAESFPTVGFDEDEMEF 203          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S2FD08_9STRA (Glycine hydroxymethyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FD08_9STRA)

HSP 1 Score: 173 bits (439), Expect = 1.520e-51
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    2 AKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTGK-IKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRY 149
            A+ L   GY LVSGGTDNHL+LVDLKKS  IDGARVE +LE+ N+ATNKNT+PGD SA+TPGGIRMGAPALTSRG  E+DF +VA FF RGV +A +V   TGK +K ++ AL    +   E+K L +++ +F++ F  +GF++++MRY
Sbjct:  101 AETLTGMGYNLVSGGTDNHLLLVDLKKSRGIDGARVERVLELANIATNKNTIPGDVSAMTPGGIRMGAPALTSRGLVEKDFVEVAKFFDRGVNIALEVKGATGKKLKDFKAALPSSEAN-AELKALENEVAHFSQQFMTVGFEEDSMRY 248          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S3M9R5_9STRA (Serine hydroxymethyltransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M9R5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.700e-51
Identity = 88/143 (61.54%), Postives = 114/143 (79.72%), Query Frame = 0
Query:    2 AKKLVDDGYQLVSGGTDNHLVLVDLKKSAS-IDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTG-KIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGF 142
            A  L+  GY LVSGGTDNHL+LV+LKKS + +DGARVE +LE+ N+ATNKNT+PGD SA+TPGGIRMG PALTSRG TEEDFE+VA FF R VT+ + + A TG KIK ++ ALA+G   +PE+++L +++  FAR+FP +GF
Sbjct:  344 ADVLMKLGYTLVSGGTDNHLLLVNLKKSKNGLDGARVERVLELANIATNKNTIPGDVSAMTPGGIRMGTPALTSRGLTEEDFEKVAHFFDRAVTITENINAKTGPKIKDFKAALANGAEGFPELQKLAEEVREFARSFPTVGF 486          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S3Q0M1_9STRA (Serine hydroxymethyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0M1_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.580e-51
Identity = 92/151 (60.93%), Postives = 114/151 (75.50%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVA-ADTGK-IKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRY 149
            MAK+L D GY LVSGGTDNHLVLVDLK S  IDGARVE +LE+  +A+NKNT+PGD SALTPGGIRMG+PAL+SRGF E+DFE+VA FF R V +A K+   + GK +K +RE  A G S  PE++ LR D+  FA +FP +GF +E M +
Sbjct:  348 MAKRLNDLGYNLVSGGTDNHLVLVDLKSSRKIDGARVERILELACIASNKNTIPGDTSALTPGGIRMGSPALSSRGFMEDDFEKVAEFFDRAVAIAVKLKKTEQGKKLKGFREMCAVGPSVDPELEVLRKDVMEFACSFPTVGFGEEEMEF 498          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: W7TN09_9STRA (Serine hydroxymethyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN09_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.490e-50
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVAADTG-KIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGF 142
            +A+ L   GY LVSGGTDNHLVLVDLK    +DGARVE ++E+ NMA NKNTVPGDKSALTPGGIR+G PALTSRGFTEEDFEQV  FF R V +A+++  +TG KIK ++EAL +G  K+  +  L+ D+  FA+ FP +GF
Sbjct:  352 LAETLTKAGYSLVSGGTDNHLVLVDLKPQ-QVDGARVERVMELANMAANKNTVPGDKSALTPGGIRIGCPALTSRGFTEEDFEQVGHFFDRAVKIAQEIKRETGPKIKDFKEALREGPGKHQALVDLKKDVVAFAQKFPTVGF 493          
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Match: A0A7S1C0P2_9STRA (Serine hydroxymethyltransferase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0P2_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.800e-50
Identity = 88/151 (58.28%), Postives = 110/151 (72.85%), Query Frame = 0
Query:    1 MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNKNTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGV--TLAKKVAADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRY 149
            +A++L   GY LVSGGTDNHLVL+DLK S +IDGARVE +LE+  MATNKNTVPGD SAL PGGIRMGAPA+TSRGF E+DF ++A FF R V  T   K   +  KIK +R   A G S +P++ QLR D+++FA  FP +GFD + M +
Sbjct:  347 LAEELTKRGYNLVSGGTDNHLVLIDLKTSRNIDGARVERVLELACMATNKNTVPGDTSALAPGGIRMGAPAMTSRGFKEDDFAKIAEFFDRAVDITCVLKDTPEGKKIKTFRNMCAVGPSVHPDLVQLRKDVSDFASGFPTVGFDIDEMEF 497          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13440.2744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUA3_ECTSI1.200e-9796.05Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A7S2C4R3_9STRA5.110e-6066.00Serine hydroxymethyltransferase n=1 Tax=Florenciel... [more]
A0A835YWD3_9STRA5.860e-6064.67Serine hydroxymethyltransferase n=1 Tax=Tribonema ... [more]
A0A7S2WJP7_9STRA1.020e-5662.91Serine hydroxymethyltransferase n=1 Tax=Rhizochrom... [more]
A0A7S0ANW0_9STRA1.360e-5660.93Glycine hydroxymethyltransferase n=1 Tax=Minutocel... [more]
A0A7S2FD08_9STRA1.520e-5157.72Glycine hydroxymethyltransferase n=1 Tax=Dictyocha... [more]
A0A7S3M9R5_9STRA1.700e-5161.54Serine hydroxymethyltransferase n=1 Tax=Spumella e... [more]
A0A7S3Q0M1_9STRA2.580e-5160.93Serine hydroxymethyltransferase n=1 Tax=Chaetocero... [more]
W7TN09_9STRA1.490e-5061.54Serine hydroxymethyltransferase n=3 Tax=Monodopsid... [more]
A0A7S1C0P2_9STRA3.800e-5058.28Serine hydroxymethyltransferase n=2 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039429Serine hydroxymethyltransferase-like domainPFAMPF00464SHMTcoord: 1..88
e-value: 2.4E-33
score: 115.3
IPR015422Pyridoxal phosphate-dependent transferase domain 1GENE3D3.90.1150.10coord: 1..145
e-value: 7.5E-52
score: 177.3
NoneNo IPR availablePANTHERPTHR11680:SF38SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIALcoord: 1..149
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 1..149
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13440contigEcto-sp13_S_contig13440:186..2046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13440.2744.1mRNA_Ecto-sp13_S_contig13440.2744.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13440 186..4696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13440.2744.1 ID=prot_Ecto-sp13_S_contig13440.2744.1|Name=mRNA_Ecto-sp13_S_contig13440.2744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MAKKLVDDGYQLVSGGTDNHLVLVDLKKSASIDGARVELMLEIVNMATNK
NTVPGDKSALTPGGIRMGAPALTSRGFTEEDFEQVAAFFHRGVTLAKKVA
ADTGKIKAYREALADGGSKYPEIKQLRDDINNFARTFPVIGFDQETMRYP
AP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039429SHMT-like_dom
IPR015422PyrdxlP-dep_Trfase_dom1
IPR001085Ser_HO-MeTrfase
IPR015424PyrdxlP-dep_Trfase