prot_Ecto-sp13_S_contig13420.2734.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13420.2734.1
Unique Nameprot_Ecto-sp13_S_contig13420.2734.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: D8LLC7_ECTSI (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC7_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 1.370e-72
Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 0
Query:    1 MRVFGSALTLAGGLFACRTASAFVAPAASIRQEDWALRNAPAGGTRTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            MRVF SALTLAGGLFACRTASAFVAPAASIR    ALRNAPAGG  TTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVT++NIFETKVPGAFELPLAAR
Sbjct:    1 MRVFESALTLAGGLFACRTASAFVAPAASIR----ALRNAPAGGASTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTESNIFETKVPGAFELPLAAR 125          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S0KAM5_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAM5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.720e-24
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0
Query:   60 TRMMAAEGV--TFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            T + AA+GV  TFGELDGTDVRVGII T+WN+  V+ + +G K++LKECNVT+ANIFET+VPGA+ELP AA+
Sbjct:   29 TALKAADGVEVTFGELDGTDVRVGIIKTKWNKVHVDNVVNGAKDALKECNVTEANIFETEVPGAYELPFAAK 100          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A448Z8V0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8V0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.490e-23
Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 0
Query:   36 ALRNAPAGGTRTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            AL N+P+       +  SS  AP+    A   V+FG+LDG+DVR+GII TRWN+E V  L DG KE+LKECNV + NIFET + GA+ELPL+AR
Sbjct:   14 ALANSPSMTGAFAPSVRSSPFAPSLLKAAESEVSFGDLDGSDVRIGIIRTRWNDEHVTNLVDGCKEALKECNVKEENIFETSIAGAYELPLSAR 107          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S4A8V9_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8V9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.230e-22
Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 0
Query:   55 RGAPATRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            R A ++ +  AE  V+F +LDG+D+R+GII TRWN+E V  L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct:   30 RSASSSLLKGAESEVSFDDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 105          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S0UIY0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIY0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.890e-22
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:   69 TFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            +FG+LDG+D+R+GII TRWN+E V  L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct:    1 SFGDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 61          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S2RMT1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMT1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.650e-22
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   58 PATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            P +R      V FGEL+G   R+GIISTRWN EI+  L  GVK++L+EC V DANIFET+VPGAFELPLAAR
Sbjct:   33 PLSRRSGLLEVDFGELNGESCRIGIISTRWNPEIIGDLKSGVKQALEECKVKDANIFETEVPGAFELPLAAR 104          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A835YTX6_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.820e-22
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query:   63 MAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            M+ EG+TF +LDG++VRVGII TRWN EIV  L  GVKE+L++C V   +IFET+VPGA+ELPLAAR
Sbjct:   39 MSKEGITFDDLDGSNVRVGIIRTRWNGEIVGNLRSGVKEALEKCGVKPEHIFETEVPGAYELPLAAR 105          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A1Z5JVA4_FISSO (6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVA4_FISSO)

HSP 1 Score: 94.7 bits (234), Expect = 1.410e-21
Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 0
Query:   60 TRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            T + AA+  V+F  LDG+ +R+GII TRWNEE VN L  G+K+ LKEC V+D NIFET VPG+FELP+AAR
Sbjct:   19 TALQAADSDVSFDNLDGSQMRIGIIKTRWNEEHVNNLVAGIKKGLKECKVSDTNIFETSVPGSFELPMAAR 89          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S4EE69_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EE69_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.440e-21
Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 0
Query:   55 RGAPATRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            R A ++ +  AE  V+F +LDG+D+R+GII TRWN+E V  L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct:   30 RSASSSLLKGAESEVSFDDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 105          
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A6U1PVR1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PVR1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.850e-21
Identity = 41/62 (66.13%), Postives = 55/62 (88.71%), Query Frame = 0
Query:   68 VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 129
            V+FGELDG+ VR+GII TRWNE+I++ L++GV++SL +C V + NIFET+VPG+FELPLAAR
Sbjct:   43 VSFGELDGSKVRIGIIKTRWNEQIMDGLSEGVQKSLNDCGVEEKNIFETEVPGSFELPLAAR 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC7_ECTSI1.370e-7293.026,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ec... [more]
A0A7S0KAM5_9STRA1.720e-2466.676,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Le... [more]
A0A448Z8V0_9STRA3.490e-2354.266,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A7S4A8V9_9STRA1.230e-2257.896,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A7S0UIY0_9STRA3.890e-2265.576,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A7S2RMT1_9STRA4.650e-2263.896,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rh... [more]
A0A835YTX6_9STRA9.820e-2265.676,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tr... [more]
A0A1Z5JVA4_FISSO1.410e-2161.976,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Fi... [more]
A0A7S4EE69_9STRA1.440e-2157.896,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ps... [more]
A0A6U1PVR1_9STRA2.850e-2166.136,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036467Lumazine/riboflavin synthase superfamilyGENE3D3.40.50.960coord: 63..129
e-value: 5.2E-19
score: 70.4
IPR036467Lumazine/riboflavin synthase superfamilySUPERFAMILY52121Lumazine synthasecoord: 71..128
IPR002180Lumazine/riboflavin synthasePFAMPF00885DMRL_synthasecoord: 78..129
e-value: 5.1E-15
score: 55.5
IPR034964Lumazine synthasePANTHERPTHR210586,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASEcoord: 62..128
NoneNo IPR availablePANTHERPTHR21058:SF06,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASEcoord: 62..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.613

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13420contigEcto-sp13_S_contig13420:250..4206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13420.2734.1mRNA_Ecto-sp13_S_contig13420.2734.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13420 250..4206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13420.2734.1 ID=prot_Ecto-sp13_S_contig13420.2734.1|Name=mRNA_Ecto-sp13_S_contig13420.2734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
MRVFGSALTLAGGLFACRTASAFVAPAASIRQEDWALRNAPAGGTRTTST
YGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVK
ESLKECNVTDANIFETKVPGAFELPLAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036467LS/RS_sf
IPR002180LS/RS
IPR034964LS