mRNA_Ecto-sp13_S_contig13420.2734.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: D8LLC7_ECTSI (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC7_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.370e-72 Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 1
Query: 1 MRVFGSALTLAGGLFACRTASAFVAPAASIRQEDWALRNAPAGGTRTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
MRVF SALTLAGGLFACRTASAFVAPAASIR ALRNAPAGG TTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVT++NIFETKVPGAFELPLAAR
Sbjct: 1 MRVFESALTLAGGLFACRTASAFVAPAASIR----ALRNAPAGGASTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTESNIFETKVPGAFELPLAAR 125
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S0KAM5_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KAM5_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.720e-24 Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 178 TRMMAAEGV--TFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
T + AA+GV TFGELDGTDVRVGII T+WN+ V+ + +G K++LKECNVT+ANIFET+VPGA+ELP AA+
Sbjct: 29 TALKAADGVEVTFGELDGTDVRVGIIKTKWNKVHVDNVVNGAKDALKECNVTEANIFETEVPGAYELPFAAK 100
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A448Z8V0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8V0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.490e-23 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 106 ALRNAPAGGTRTTSTYGSSRGAPATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
AL N+P+ + SS AP+ A V+FG+LDG+DVR+GII TRWN+E V L DG KE+LKECNV + NIFET + GA+ELPL+AR
Sbjct: 14 ALANSPSMTGAFAPSVRSSPFAPSLLKAAESEVSFGDLDGSDVRIGIIRTRWNDEHVTNLVDGCKEALKECNVKEENIFETSIAGAYELPLSAR 107
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S4A8V9_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8V9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.230e-22 Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 163 RGAPATRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
R A ++ + AE V+F +LDG+D+R+GII TRWN+E V L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct: 30 RSASSSLLKGAESEVSFDDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 105
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S0UIY0_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIY0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.890e-22 Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 1
Query: 205 TFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
+FG+LDG+D+R+GII TRWN+E V L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct: 1 SFGDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 61
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S2RMT1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMT1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.650e-22 Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 172 PATRMMAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
P +R V FGEL+G R+GIISTRWN EI+ L GVK++L+EC V DANIFET+VPGAFELPLAAR
Sbjct: 33 PLSRRSGLLEVDFGELNGESCRIGIISTRWNPEIIGDLKSGVKQALEECKVKDANIFETEVPGAFELPLAAR 104
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A835YTX6_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX6_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 9.820e-22 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 187 MAAEGVTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
M+ EG+TF +LDG++VRVGII TRWN EIV L GVKE+L++C V +IFET+VPGA+ELPLAAR
Sbjct: 39 MSKEGITFDDLDGSNVRVGIIRTRWNGEIVGNLRSGVKEALEKCGVKPEHIFETEVPGAYELPLAAR 105
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A1Z5JVA4_FISSO (6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVA4_FISSO) HSP 1 Score: 94.7 bits (234), Expect = 1.410e-21 Identity = 44/71 (61.97%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 178 TRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
T + AA+ V+F LDG+ +R+GII TRWNEE VN L G+K+ LKEC V+D NIFET VPG+FELP+AAR
Sbjct: 19 TALQAADSDVSFDNLDGSQMRIGIIKTRWNEEHVNNLVAGIKKGLKECKVSDTNIFETSVPGSFELPMAAR 89
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A7S4EE69_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EE69_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.440e-21 Identity = 44/76 (57.89%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 163 RGAPATRMMAAEG-VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
R A ++ + AE V+F +LDG+D+R+GII TRWN+E V L DG K++LKECNV + NIFET +PGA+ELPL+AR
Sbjct: 30 RSASSSLLKGAESEVSFDDLDGSDIRIGIIRTRWNDEHVTNLVDGCKKALKECNVKEENIFETSIPGAYELPLSAR 105
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Match: A0A6U1PVR1_9STRA (6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PVR1_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.850e-21 Identity = 41/62 (66.13%), Postives = 55/62 (88.71%), Query Frame = 1
Query: 202 VTFGELDGTDVRVGIISTRWNEEIVNRLTDGVKESLKECNVTDANIFETKVPGAFELPLAAR 387
V+FGELDG+ VR+GII TRWNE+I++ L++GV++SL +C V + NIFET+VPG+FELPLAAR
Sbjct: 43 VSFGELDGSKVRIGIIKTRWNEQIMDGLSEGVQKSLNDCGVEEKNIFETEVPGSFELPLAAR 104 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13420.2734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig13420.2734.1 >prot_Ecto-sp13_S_contig13420.2734.1 ID=prot_Ecto-sp13_S_contig13420.2734.1|Name=mRNA_Ecto-sp13_S_contig13420.2734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp MRVFGSALTLAGGLFACRTASAFVAPAASIRQEDWALRNAPAGGTRTTSTback to top mRNA from alignment at Ecto-sp13_S_contig13420:250..4206+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig13420.2734.1 ID=mRNA_Ecto-sp13_S_contig13420.2734.1|Name=mRNA_Ecto-sp13_S_contig13420.2734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13420:250..4206+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig13420:250..4206+ >mRNA_Ecto-sp13_S_contig13420.2734.1 ID=mRNA_Ecto-sp13_S_contig13420.2734.1|Name=mRNA_Ecto-sp13_S_contig13420.2734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=390bp|location=Sequence derived from alignment at Ecto-sp13_S_contig13420:250..4206+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |