Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 274 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 183 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462518.9943573-UTR-Ecto-sp13_S_contig10249:2314..2335 | 1681462518.9943573-UTR-Ecto-sp13_S_contig10249:2314..2335 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10249 2315..2335 - |
| 1681462519.021907-UTR-Ecto-sp13_S_contig10249:2771..2841 | 1681462519.021907-UTR-Ecto-sp13_S_contig10249:2771..2841 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig10249 2772..2841 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681462519.0032594-CDS-Ecto-sp13_S_contig10249:2335..2357 | 1681462519.0032594-CDS-Ecto-sp13_S_contig10249:2335..2357 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10249 2336..2357 - |
| 1681462519.0131557-CDS-Ecto-sp13_S_contig10249:2610..2771 | 1681462519.0131557-CDS-Ecto-sp13_S_contig10249:2610..2771 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig10249 2611..2771 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10249.273.1 >prot_Ecto-sp13_S_contig10249.273.1 ID=prot_Ecto-sp13_S_contig10249.273.1|Name=mRNA_Ecto-sp13_S_contig10249.273.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
MLHSGDRFCSSRSLHDEESAIQQSMMHLRDSLGETAPSAGRHSEQHRHRA
FVNGRLGCRS* back to topmRNA from alignment at Ecto-sp13_S_contig10249:2315..2841- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig10249.273.1 ID=mRNA_Ecto-sp13_S_contig10249.273.1|Name=mRNA_Ecto-sp13_S_contig10249.273.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=527bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10249:2315..2841- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCTCCGAGGATATAGATCCCAATGTCCAGACGGTAGATTGATCTTGTAC
TCTGCTGTGGGTTGCATAATATGCTCCACTCCGGGGACCGATTTTGTTCG
TCTCGATCTCTCCACGACGAAGAGAGTGCCATACAGCAGTCAATGATGCA
TCTTCGGGACTCTCTTGGCGAGACAGCCCCCAGCGCCGGCCGACATTCCG
AGCAGCACCGTCACCGAGCTTTTGTCAATGGGTGTGTGGTAGCTTGCGCG
GCCTGCGGCGTGTTCAACTGCAAGAAGAGGACGTGTGCAGCACACCACCC
TCCCGTGTTTGACGCGATTTGGAAGCTTCAGTACAACGACACCCGCGGGC
GTTAACCGTCGAAAGTTGGTACCATGAAACAGTGGTATGTGTCACATTCT
TACGGTCGTGCCTCCCTCGTGTTCCCTCGTCTGTTTCGTCTTCTCTACCC
TCTACCCTTCTGGCCCCAATCGTGCCCGCCGCAGGAGACTCGGATGTCGT
TCGTGAAGCTGTCGGCGGGAAAACGGG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig10249:2315..2841- >mRNA_Ecto-sp13_S_contig10249.273.1 ID=mRNA_Ecto-sp13_S_contig10249.273.1|Name=mRNA_Ecto-sp13_S_contig10249.273.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=183bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10249:2315..2841- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCCACTCCGGGGACCGATTTTGTTCGTCTCGATCTCTCCACGACGA
AGAGAGTGCCATACAGCAGTCAATGATGCATCTTCGGGACTCTCTTGGCG
AGACAGCCCCCAGCGCCGGCCGACATTCCGAGCAGCACCGTCACCGAGCT
TTTGTCAATGGGAGACTCGGATGTCGTTCGTGA back to top
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