prot_Ecto-sp13_S_contig13388.2709.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig13388.2709.1
Unique Nameprot_Ecto-sp13_S_contig13388.2709.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
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BLAST of mRNA_Ecto-sp13_S_contig13388.2709.1 vs. uniprot
Match: D7FU27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU27_ECTSI)

HSP 1 Score: 592 bits (1526), Expect = 5.310e-204
Identity = 317/359 (88.30%), Postives = 325/359 (90.53%), Query Frame = 0 
Query:    1 CAAEVLPGGLSKRSDGELETTTVAEATTHDLLRSPPTSWNPGGDGRGRKPAQSPRSPSRWATSAMDLLTGLTSSSSPPRPLRFSAGSGGGGCARRNSVGGGRAGEGAVAAADGVLLASRVLAGVTEVHAEGVEEALALFRRGLRNRRKEGHVVISARLVSVGGSDKRVDKKWVPDSASETGELVFVELGDCPNGDLPQTLRTALAHLKVGNHGLGRVDPRASRSSRLATTKKAAGVSPPLSEQSSGDNVRGSGGGLRHDPLWALLSKFAQAGTGGADTFLRCPMTVTGEGGGRADLRPSTPQPPRREVAITGTMTGPRTGEGRTARGASVGRGPLVVSVIATLRSGDGRFLEEKALLQV 359
            C +EVLPGGLSK S G LETTTVAEATT DLLRSPP+SWNPGGDGRGRK AQSPRSPS WATSA DLLTGLTSS SPPRPLRFS GSGGGG  RRNSVGGGR G+GAVAAADGVLLASRVLAGVTEVHA+GVE ALALFRRGLRNRRKEGHVVISARLVSVGGSDKRVDKK V DSA ETGELVFVELGDCPNGDLPQTLRTALAHLKVGNHGLG VDPRA RSSRLATTKKAAGVSPPLSEQS G+NVR  GGGLRHDPLWALLS FAQAGTGGADT LR PMTVT EGGGRADLRPSTP  PR EVAITGTM GPR GEG  ARGA+VGRGPLVVSV+ATLRSGDGRF EEKALLQ+
Sbjct:   15 CVSEVLPGGLSKGSGGGLETTTVAEATTRDLLRSPPSSWNPGGDGRGRKAAQSPRSPSTWATSARDLLTGLTSSPSPPRPLRFSVGSGGGGFGRRNSVGGGRPGKGAVAAADGVLLASRVLAGVTEVHADGVEAALALFRRGLRNRRKEGHVVISARLVSVGGSDKRVDKKRVLDSALETGELVFVELGDCPNGDLPQTLRTALAHLKVGNHGLGGVDPRAPRSSRLATTKKAAGVSPPLSEQSGGNNVRDGGGGLRHDPLWALLSAFAQAGTGGADTHLRSPMTVTDEGGGRADLRPSTPHSPR-EVAITGTMRGPRAGEGGAARGAAVGRGPLVVSVMATLRSGDGRFQEEKALLQI 372
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig13388.2709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU27_ECTSI5.310e-20488.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig13388contigEcto-sp13_S_contig13388:270..2260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig13388.2709.1mRNA_Ecto-sp13_S_contig13388.2709.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig13388 270..2260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig13388.2709.1 ID=prot_Ecto-sp13_S_contig13388.2709.1|Name=mRNA_Ecto-sp13_S_contig13388.2709.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
CAAEVLPGGLSKRSDGELETTTVAEATTHDLLRSPPTSWNPGGDGRGRKP
AQSPRSPSRWATSAMDLLTGLTSSSSPPRPLRFSAGSGGGGCARRNSVGG
GRAGEGAVAAADGVLLASRVLAGVTEVHAEGVEEALALFRRGLRNRRKEG
HVVISARLVSVGGSDKRVDKKWVPDSASETGELVFVELGDCPNGDLPQTL
RTALAHLKVGNHGLGRVDPRASRSSRLATTKKAAGVSPPLSEQSSGDNVR
GSGGGLRHDPLWALLSKFAQAGTGGADTFLRCPMTVTGEGGGRADLRPST
PQPPRREVAITGTMTGPRTGEGRTARGASVGRGPLVVSVIATLRSGDGRF
LEEKALLQVREKSSRK*
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