prot_Ecto-sp13_S_contig10243.270.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10243.270.1
Unique Nameprot_Ecto-sp13_S_contig10243.270.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length684
Homology
BLAST of mRNA_Ecto-sp13_S_contig10243.270.1 vs. uniprot
Match: D7FLH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH4_ECTSI)

HSP 1 Score: 1044 bits (2699), Expect = 0.000e+0
Identity = 582/681 (85.46%), Postives = 601/681 (88.25%), Query Frame = 0
Query:    4 RARLFRNIGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRSTSSRGGSSFYKTVLDATSAAPTAAPPSPSAIPTPQTITFGERMASSGPSVAGRPASTPAAAGSHPSGASATSPARPGDCQENDRDALAAGRSKHGAADEAVPEPKPLAVTAKRRTEAAVAAKRQAEAERRQAALATIENHRSHHRAASARSPTAAQTATASSSGVNQEGKDSLARDSNSVATTLTGRPVSSSDHLRAARAADRKGNLSRTTMTRAFSAQSVRSGATLGYYGRDEVNVLSAISKNPSRIAVYNRITEGKQGNNGGEKSPEIAVAPVPSPHRRRPRTTPSTMRLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAADVSRAESGEGIRPAAGLAHAGGGKETPLGAMIGPGVGFGLNVGVVSEQPPPSRTVKMYRNAAREYGRGASAGQAMWMDLQRDVSIARTSSRCRRDTHSGRHVGGGTRSTAVSDLSSSSTSTFQDLPQIGTTSASEKVSWGARDDTGTGPEGSDLDDSDDEVQAILELEGGGVGSGRSTARHGRGGVGGVASAANDWFAATRHGRDDAVPGGTRVALNRGPGWEDTYAFRRSTARRAIKTSRIVSGKKKMPLLSSAATLSGKWNWDWCSRPLSALPADRIEYLLSKFDDEMSAPFGEARRP 684
            + RLF++IGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRSTSSRGGSSFYKTVLDATSAAP AAPPSPSA  TPQT+TFGER ASSGP VAGR AS P   GSHPSGA+ATSPARPGDCQENDRDALAAGRS+ GAA EAV EP PLAVTA RRTEAA AA+RQAEAERRQ ALATIE HRS HRAASA SP AAQT T  SSGVNQEG+  LARDSNSVATTLTGRPVSS DHL AARAADRKG LSRTTMTRAFSAQSVRSGATLGYYGR+E+NVLSAISKNPSRIAVYNR+TE KQGNNGGE SPEIAVAPVPSPHRRRPRTTPSTMRLS                    XXXX              STAAD SRAESGEG+RPAAGLA+AG GKETPLGAMIGPGVGFGLNVGV+SEQPPPSRTVKMYRNAAREYGRGASAGQAMWMDLQRDV +ART SRCRRD HSGRHVGGGT S  V DLSSSSTSTFQDLPQIG TSASEKVSWGARDD+GTGPEGSDL+DSDDEVQAILELEGGGVGSG STARHGRGGVGGVASAANDWFAATRHGRDDAVPGGTRVALNRGPGWEDTYAFRRSTARRAIKTSRI+SGKK MPLLSSAATL GKWNWDWCSRPLSALPADRIEYL SKFDD+MSAPFGEARRP
Sbjct:  720 KRRLFQDIGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRSTSSRGGSSFYKTVLDATSAAPAAAPPSPSATSTPQTVTFGERTASSGPLVAGRAASAPVGVGSHPSGAAATSPARPGDCQENDRDALAAGRSERGAAGEAVAEPNPLAVTAPRRTEAAAAARRQAEAERRQVALATIEKHRSCHRAASACSPAAAQTDTVPSSGVNQEGRVRLARDSNSVATTLTGRPVSSGDHLGAARAADRKGKLSRTTMTRAFSAQSVRSGATLGYYGREELNVLSAISKNPSRIAVYNRVTEAKQGNNGGENSPEIAVAPVPSPHRRRPRTTPSTMRLSSSTAALSLSGESSSLTRSPSXXXXGKQQRSATVLSPPPSTAADDSRAESGEGVRPAAGLAYAGDGKETPLGAMIGPGVGFGLNVGVMSEQPPPSRTVKMYRNAAREYGRGASAGQAMWMDLQRDVPVARTGSRCRRDIHSGRHVGGGTTSATVLDLSSSSTSTFQDLPQIGNTSASEKVSWGARDDSGTGPEGSDLEDSDDEVQAILELEGGGVGSGSSTARHGRGGVGGVASAANDWFAATRHGRDDAVPGGTRVALNRGPGWEDTYAFRRSTARRAIKTSRILSGKK-MPLLSSAATLPGKWNWDWCSRPLSALPADRIEYLQSKFDDDMSAPFGEARRP 1399          
BLAST of mRNA_Ecto-sp13_S_contig10243.270.1 vs. uniprot
Match: A0A6H5JHV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV9_9PHAE)

HSP 1 Score: 929 bits (2401), Expect = 0.000e+0
Identity = 538/699 (76.97%), Postives = 562/699 (80.40%), Query Frame = 0
Query:    2 QPRARLFRNIGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRSTSSRGGSSFYKTVLDATSAAPTAAPPSPSAIPTPQTITFGERMASSGPSVAGRPASTPAAAGSHPSGASATSPARPGDCQENDRDALAAGRSKHGAADEAVPEPKPLAVTAKRRTEAAVAAKRQAEAERRQAALATIENHRSHHRAASARSPTAAQTATASSSGVNQEGKDSLARDSNSVATTLTGRPVSSSDHLRAARAADRKGNLSRTTMTRAFSAQSVRSGATLGYYGRDEVNVLSAISKNPSRIAVYNRITEGKQGNNGGEKSPEIAVAPVPSPHRRRPRTTPSTMRLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAADVSRAESGEGIRPAAGLAHAGGGKETPLGAMIGPGVGFGLNVGVVSEQPPPSRTVKMYRNAAREYGRGASAGQAMWMDLQRDVSIARTSSRCRRDTHSGR--------HVGG--------GTRSTAVSDLSSSSTSTFQDLPQIGTTSASEKVSWGARDDTGTGPEGSDLDDSDDEVQAILELEGGGVGSGRSTARHGRGGVGGVASAANDWFAATRHGRDDAVPGGTRVALNRGPGWEDTYAFRRSTARRAIKTSRIVSGKKKMPLLSSAATLSGKWNWDWCSRPLSALPADRIEYLLSKFDDEMSAPFGEARRP 684
            QPRARLFRNIGWSFLVDTVRVRPLHEEMTA LLDEVER RAQKTSRRSTSSRGG SFYKTVLDATSAAPTAA PSPSAI TPQ++TFGERMASSGP VAG  ASTPA+ GSHPSGA+ATSP+RPGDCQENDRDALAAGRSKHGAA EAVPEP PL VTA RRTEAAVAAKRQ EAERRQAALATIE HRS HRAASARSP AAQT+TA+SSGVNQEGKD LAR SNSVATTLTGRPVSS DHL AARAADRKGNLS TTMTRAFS QSVRSGATLGYYGR+EV VLSAISKNPSRIAVYNRITE KQGN  GE SPEIAVAPVPSP RRRPRT PST+RLS                                      STAAD  RAESGEG+RPA GLAHAGGG++TPLGAMIGPGVG GLNVGVVSEQPPPSRT KMYRNAAREYGRGASAGQAMWM    +    R + R R +             H+ G        G R +   +++ S+          G       VSWGARDD GTGPEGSDLDDSDDEVQAI ELEGGGVGSG STARHGRGGV GVASAANDWFAATRHGRDDAVPGGTRVAL+RGPGWEDTYAF+RSTARRAIK+SRIVSGKK MPLLSSAATL GKWNWDWCSRPLSALP DRIEYLLSKFDDEMSAPFGEARRP
Sbjct:  395 QPRARLFRNIGWSFLVDTVRVRPLHEEMTAALLDEVERLRAQKTSRRSTSSRGGLSFYKTVLDATSAAPTAAHPSPSAISTPQSVTFGERMASSGPPVAGLAASTPASVGSHPSGAAATSPSRPGDCQENDRDALAAGRSKHGAAGEAVPEPNPLTVTAHRRTEAAVAAKRQEEAERRQAALATIEKHRSCHRAASARSPAAAQTSTAASSGVNQEGKDRLARGSNSVATTLTGRPVSSIDHLGAARAADRKGNLSPTTMTRAFSEQSVRSGATLGYYGREEVKVLSAISKNPSRIAVYNRITEEKQGN--GENSPEIAVAPVPSPRRRRPRTMPSTVRLSRSTAALSLGGEDSSLTQSTWSSSNGKRQRSSTVLSPPPSTAADNLRAESGEGVRPATGLAHAGGGEDTPLGAMIGPGVGLGLNVGVVSEQPPPSRTAKMYRNAAREYGRGASAGQAMWMFAVSEGHPPRPARRRRNEIRRRFRLVVKFYVHIAGPPSNWDHFGFRKSEDREVNRSTGRNTPIKKNAGV------VSWGARDDAGTGPEGSDLDDSDDEVQAIHELEGGGVGSGSSTARHGRGGVEGVASAANDWFAATRHGRDDAVPGGTRVALSRGPGWEDTYAFKRSTARRAIKSSRIVSGKKNMPLLSSAATLPGKWNWDWCSRPLSALPVDRIEYLLSKFDDEMSAPFGEARRP 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10243.270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLH4_ECTSI0.000e+085.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHV9_9PHAE0.000e+076.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10243contigEcto-sp13_S_contig10243:3..3532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10243.270.1mRNA_Ecto-sp13_S_contig10243.270.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10243 3..5935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10243.270.1 ID=prot_Ecto-sp13_S_contig10243.270.1|Name=mRNA_Ecto-sp13_S_contig10243.270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=684bp
MQPRARLFRNIGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRST
SSRGGSSFYKTVLDATSAAPTAAPPSPSAIPTPQTITFGERMASSGPSVA
GRPASTPAAAGSHPSGASATSPARPGDCQENDRDALAAGRSKHGAADEAV
PEPKPLAVTAKRRTEAAVAAKRQAEAERRQAALATIENHRSHHRAASARS
PTAAQTATASSSGVNQEGKDSLARDSNSVATTLTGRPVSSSDHLRAARAA
DRKGNLSRTTMTRAFSAQSVRSGATLGYYGRDEVNVLSAISKNPSRIAVY
NRITEGKQGNNGGEKSPEIAVAPVPSPHRRRPRTTPSTMRLSSSTAALLL
SGEDSSLTRSTSSSSNGKRQRSATVLSPPPSTAADVSRAESGEGIRPAAG
LAHAGGGKETPLGAMIGPGVGFGLNVGVVSEQPPPSRTVKMYRNAAREYG
RGASAGQAMWMDLQRDVSIARTSSRCRRDTHSGRHVGGGTRSTAVSDLSS
SSTSTFQDLPQIGTTSASEKVSWGARDDTGTGPEGSDLDDSDDEVQAILE
LEGGGVGSGRSTARHGRGGVGGVASAANDWFAATRHGRDDAVPGGTRVAL
NRGPGWEDTYAFRRSTARRAIKTSRIVSGKKKMPLLSSAATLSGKWNWDW
CSRPLSALPADRIEYLLSKFDDEMSAPFGEARRP
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